| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,511,923 | 0 | A | C | 44.9% | 111.1 / 13.9 | 78 | V141G (GTT→GGT) | yhfZ | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (31/12); new base C (0/35); total (31/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.16e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGTATAGGGCAAGGGC > NC_000913/3511784‑3512069 | cAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATg > 2:837994/1‑151 (MQ=255) ccccACGCGCTTCACGTTGGGGGACTCGCCTTTACGGAAAACCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAC‑CTCCAGCGGGAGGAATAAG‑CCTTTTGGGGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGGGAACCCTCCGCCATGTCa < 2:761744/151‑1 (MQ=255) ttCACTTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTG‑CTCGCCACCGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGGGGCATAAG‑CTTTTTTGCTT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGcc < 2:2092/149‑1 (MQ=255) cACGTTTGCGACCCCGCTTTTACGCCAAATAAACGGGTG‑CCCGCCAACGAGGGTGGGGGCCCCCAC‑CTCCAGCGGGGGACATAAG‑CTTTTTGGCGG‑G‑AGATAAC‑TTC‑CC‑GCCGCAAGTCGAAAACCCCCCGCCATGTCATACACGCCAtt < 1:14967/150‑1 (MQ=255) tttGCGGACTCGCCTTTACGGCAAATCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGc > 2:364952/1‑150 (MQ=255) tggggcctcccttttCCGGAAAACCAACTGGTG‑CCCGCAACCTTAGGTGGCCGCCCCCAC‑CCCAAGCGCGGGACATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTC‑CC‑GCCGTTAGTCGCAAAACCACCGCCATGTCATACACGCCATTAAGCa < 2:573182/137‑1 (MQ=255) ggccTCGCCTTTACGGCAAATCAACTGGTG‑CCCGCAAACGTAGGTGTGCGCCCCCAA‑CCCCAGCGCGAGGCATAAG‑CTTTTTTGCGT‑G‑AGATAAT‑TTC‑CC‑GCCGCTAGTCGCGAAACCCCCGCCATGTCATACACGCCATTAAGCAGaca < 1:738454/147‑1 (MQ=255) gACTCGCCTTTACGGCAAATCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGacac > 2:496092/1‑150 (MQ=255) cccGCCTTT‑CGGGAAATCCAATGGGGCCTCCCCACCGTAGGTG‑GGGGCCCCAACCCCCAGCGGGGGGCATAGG‑CTTTTTTGCGG‑G‑AAATACC‑TTT‑CC‑GCCGCTAGCCGCAAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTc < 2:409439/148‑1 (MQ=255) tCGCCTTTACGGCAAATCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTcc > 2:160999/1‑150 (MQ=255) cGCTTTTCCGGAAAATCAACGGGTG‑CTCCCCAACGTAGGTGTGCGCCCCCAA‑CCCCAGCGCGAGGCATAAG‑CTTTTTTGCGT‑G‑AGATAAT‑TTC‑CC‑GCCGCTAGTCGCAAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCAc < 1:817227/151‑1 (MQ=255) cGCTTTTACGGAAAATCAACTGGTG‑CTCGCCACCGTAGGTGTGCGGCCCAAA‑CCCCAGCGCGGGGCAAAAG‑CTTTTTTGCGT‑G‑AGATACC‑TTT‑CC‑GCCGCTAGTCGCAAAACCCCCGCCATGTCATACACGCCATTAAGCAGACACTcc < 1:874134/149‑1 (MQ=255) cGCTTTTACGGAAAATCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCAAA‑CCCCAGCGCGGGGCATAAG‑CTTTTTTGCGT‑G‑AGATACC‑TTT‑CC‑GCCGCTAGTCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTcc < 1:122691/149‑1 (MQ=255) gCCTTTACGGCAAATCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCAcg > 2:59741/1‑151 (MQ=255) ttACGGAAAATCAACGGGTG‑CCCCCCACCGTAGGTGTGCGGCCCCAA‑CCCCAGCGCGAGGCATAAG‑CTTTTTGGCGT‑G‑AGATAAC‑TTC‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGa < 1:902015/150‑1 (MQ=255) aattCACCTGGTC‑CTCGCCAACGTGGTTGTGCGCCCCCAC‑CCCCACCGCGAGGCATAAG‑CTTTTTTGGGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTACTCGCAAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCcgc < 1:997006/148‑1 (MQ=255) aaaTCACCTGGTG‑CTCGCCACCGTGGGTGTGCGCCCCCAC‑CCCCAGCGCGGGGCATAAG‑CTTTTTTGCGT‑G‑AGATACC‑TTC‑CC‑GCCGCTAGTCGCGAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCcg < 1:1078801/150‑1 (MQ=255) aaaTCAACTGGTG‑CTCGCCAACGTAGGTGTGCGCCCCCAA‑CCCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATcc < 1:142948/149‑1 (MQ=255) aaCTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCAc > 1:670114/1‑151 (MQ=255) aaCTGGGG‑CTCGCCACCGTAGTTGTGCGGCCCCAC‑CCCCAGCGCGGGGCATAAC‑CTTTTTTGGGT‑G‑AAATAAT‑TTT‑CC‑GCCCCTATCCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCa < 2:321834/150‑1 (MQ=255) gggccTCGCAACCGTGGGTGTGCGCCCCAAC‑CCCCGGCGCGAGGAAAAAG‑CTTTTTTGGGG‑A‑AGAAAAC‑TTC‑CC‑GCCGCTAGTCGCAAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCAt < 2:857106/147‑1 (MQ=255) g‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCAtgtg > 1:760170/1‑151 (MQ=255) ccggCCAAAGTAGGTGTGCGCCCCCAC‑CCCAAGCGAGGGCAATAGG‑CATTTTCGGGA‑G‑AGATAAC‑TTG‑CC‑CCGGATAGTCCCGAACCCACCTCCATGTCATCCACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCAtg < 2:406595/145‑1 (MQ=255) tCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTgcg > 1:931432/1‑151 (MQ=255) tCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTgcg > 1:788014/1‑151 (MQ=255) cccccAACGTGGGTGTGCGCCCCAAC‑CCCCGGCGCGGGGAATAAG‑CTTTTTGGCTT‑G‑AAATATC‑TTC‑CC‑GCCGCTAGTCGCAAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCAtgt < 2:1004407/145‑1 (MQ=255) caccatcttgggTGTGCGCCCCCAA‑CCCCAGCCCGGGGC‑TAAGCCCTTTTTGGGT‑G‑AGATACC‑TTC‑CC‑CCCGCTTGTCGCAAAACCACCGCCATTTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGc < 2:289298/133‑1 (MQ=255) ccAAGGTGGGTGGGGGCCCCAAA‑CCCCAGCGGGGGGAATAAC‑CCTTTTGGCGG‑G‑AAATAAC‑TTC‑CC‑GCCGCTAGTCGCAAAACCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTgc < 1:458667/147‑1 (MQ=255) cagcGTAGGGGGGC‑GCCCCAA‑CCCCCGGGGGGGGGAAAAA‑CCTTTTTGGGG‑G‑GAAAAACGTTC‑CC‑GCCGCTAGCGGCAAACCCTCCGCCATGTAATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCAtgt < 2:859340/141‑1 (MQ=255) cAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCAt > 1:758358/1‑150 (MQ=255) aaCGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTC‑CC‑GCCGCTAGTCGCGAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATa < 1:248080/150‑1 (MQ=255) gTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTa > 2:415726/1‑150 (MQ=255) gttgtgGGCCCCAAA‑CTCCAGCGAGGGAAAAAAG‑CTTTTTTGCGT‑G‑AGATACC‑TTC‑CC‑GCCACTATTCGCAAACCCCCCGCAATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTaaaa < 1:1103979/148‑1 (MQ=255) ggTGTGGGCCCCCAC‑CTCCAGCGGGGGGCATAAC‑CTTTTTGGGGT‑G‑AGATACC‑TTC‑CC‑GCCGCTAGCCGCGAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTaaaaa < 2:690020/151‑1 (MQ=255) ggTGGGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CTTTTTTGCGT‑G‑AGATAAC‑TTC‑CC‑GCCGCTAGTCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTaaa < 1:559658/149‑1 (MQ=255) gtggGCGGCCCCAA‑CCCCAGCGCGGGGAATAAC‑CTTTTTTGCGT‑G‑AAAAAAC‑TTT‑CC‑GCCGCTAGTCGCAAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGt < 2:276251/145‑1 (MQ=255) gtgCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAgg > 1:280485/1‑150 (MQ=255) cGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATg > 1:248419/1‑151 (MQ=255) ccccAC‑CCCCAGGGGGGGGCAAAAC‑CTTTTTTGGGT‑G‑AAATACT‑TTC‑CC‑CCCGCTAGCCGCAAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGa < 2:251898/145‑1 (MQ=255) ccccAC‑CCCCAGCGCGGGGCAAAAC‑CTTTTTGGCGT‑G‑AAATACC‑TTC‑CC‑GCCGCTAGTCGCGAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAAt < 1:67867/147‑1 (MQ=255) ccacccccAGCGCGAGGCAAAAC‑CTTTTTTGCGT‑A‑AGAAAAC‑TTC‑CC‑GCCGCTAGTCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATc < 1:335518/145‑1 (MQ=255) aa‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCa > 1:202906/1‑150 (MQ=255) acccccAGCGGGGGGAAAAAC‑CTTTTTTGCGT‑G‑AAATACC‑TTC‑CC‑GCCGCTAGTCGCAAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCa < 1:752268/146‑1 (MQ=255) ccccAGCGCGAGGAAAAAG‑CTTTTTTGCGG‑G‑AAATAAC‑TTC‑CC‑GCCGCTAGCCGCGAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCaaa < 1:218344/148‑1 (MQ=255) tCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACt > 2:697343/1‑151 (MQ=255) cgcgAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCt > 2:445509/1‑151 (MQ=255) gggggCAAAAG‑CCTTTTTGCGG‑GAAGATACT‑TTC‑CC‑CCCGCTAGTCGCGAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTggg < 2:766982/145‑1 (MQ=255) gggaggaataG‑CCTTTTTGGGTGG‑AAAAAAT‑TTC‑CC‑GCCGCTGGTCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGc < 2:196479/140‑1 (MQ=255) gAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTc > 2:701358/1‑151 (MQ=255) gAGGAATAAG‑CTTTTTTGCGG‑G‑AGATACC‑TTC‑CC‑GCCGCTAGTCGCAAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTggg < 1:304805/146‑1 (MQ=255) aTAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATcc > 1:935662/1‑151 (MQ=255) taacctttttgGCGT‑G‑AGATACT‑TTT‑CC‑CCCGCTGGGCGCAAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCt < 1:966981/136‑1 (MQ=255) ccTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTc > 2:322450/1‑150 (MQ=255) tttttGGGT‑G‑AGATACT‑TTC‑CC‑GCCGCTAGTCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTc < 2:771126/148‑1 (MQ=255) tttttGCGT‑G‑AGA‑AAC‑TTTCCC‑GCCGCTGGCCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTc < 1:476693/148‑1 (MQ=255) ttttGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGcc > 2:1079256/1‑150 (MQ=255) tttGGGA‑G‑AGATACT‑TTC‑CC‑GCCCTTAGCGCCGAACCCACCGCCATGTCGTACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCa < 2:1074143/150‑1 (MQ=255) tttGCGT‑G‑AGAAACC‑TTC‑CC‑GCCGTTAGTCGCAAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCa < 1:833561/150‑1 (MQ=255) ttttggtgtggaTAAC‑CTT‑CCGGCGGTTAGTCGCGAAACCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATTCCATCAAACTGGGCTTTCAATCCGCTCg < 2:1073419/139‑1 (MQ=255) ttGCGT‑G‑AAATACC‑TTC‑CC‑GCCGCTGGCCGCGAACCCCCCGCCATGTCATCCACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAg < 2:710254/150‑1 (MQ=255) ttgggtggaaaaacc‑TTC‑CC‑GCCGCTGGCCGCAAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCa < 2:1104150/136‑1 (MQ=255) tGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGc > 1:229447/1‑151 (MQ=255) agaTAAC‑TTC‑CC‑GCCGCTAGTCGCAAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGt < 1:654290/151‑1 (MQ=255) aTAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTAc > 1:828991/1‑151 (MQ=255) aaC‑TTC‑CC‑GCCGCTAGTCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTAc < 1:968080/149‑1 (MQ=255) aC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACaa > 1:648540/1‑150 (MQ=255) ttccc‑gccgCTAGCCGCAAACCCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACaaa < 1:26318/146‑1 (MQ=255) tt‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCATACAAACgg > 1:50709/1‑151 (MQ=255) t‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACggg > 2:759645/1‑151 (MQ=255) cc‑gccgCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACggg > 1:498645/1‑150 (MQ=255) gccgcTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGtat > 2:579701/1‑151 (MQ=255) ccgcTGGCCGCGAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGtata < 2:168551/151‑1 (MQ=255) ccgcTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGtat > 1:916864/1‑150 (MQ=255) ccgcTAGTCGCAAACCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGtata < 1:84011/151‑1 (MQ=255) caatAGCCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACCCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGtata > 2:1032699/4‑150 (MQ=255) gcTAGTCGCAAAACCCCCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGTATag < 2:281438/150‑1 (MQ=255) tAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGTATagggc > 1:40320/1‑151 (MQ=255) cgcgAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGCATagggcaagg > 2:42208/1‑151 (MQ=255) aaaCCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGTATagggcaagggc < 1:351959/149‑1 (MQ=255) | CAGCCCCACGCGCTTCACGTTTGCGGACTCGCCTTTACGGCAAATCAACTGGTG‑CTCGCCAACGTAGGTGTGCGGCCCCAA‑CTCCAGCGCGAGGCATAAG‑CCTTTTTGCGT‑G‑AGATAAC‑TTT‑CC‑GCCGCTAGTCGCGAAACCACCGCCATGTCATACACGCCATTAAGCAGACACTCCACGCGAATATCCGCGCCACGCATGTGCGCATAGTAAAAAGGAATGCCATCAAACTGGGCTTTCAATCCGCTCGCCAGGCCTTCGTACAAACGGGTATAGGGCAAGGGC > NC_000913/3511784‑3512069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |