Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,555,106	0	C	A	40.9%	142.6 / 22.5	66	N177K (AAC→AAA)	uxuR	fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor
Reads supporting (aligned to +/- strand):  ref base C (8/31);  new base A (27/0);  total (35/31)
Fisher's exact test for biased strand distribution p-value = 1.20e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATTGCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGGCAGCATCTGGAAAACG  >  NC_000913/4554959‑4555254                                                                                                                                                    |                                                                                                                                                     aTTGCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGGaaaaaa                                                                                                                                                    >  2:485937/1‑150 (MQ=255) aTTGCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAaaaaaa                                                                                                                                                    >  1:847834/1‑150 (MQ=255) aTTGCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAaaaaaa                                                                                                                                                    >  1:1114574/1‑150 (MQ=255)  ttGCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAaaaaaa                                                                                                                                                    >  1:665058/1‑149 (MQ=255)    gCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAAcc                                                                                                                                                 >  1:410024/1‑150 (MQ=255)      aaCTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAAt                                                                                                                                              <  1:580512/151‑1 (MQ=255)      aaCTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAAcc                                                                                                                                                 >  1:812156/1‑148 (MQ=255)           gAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGa                                                                                                                                         <  1:354660/151‑1 (MQ=255)              gagCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCCAAGGGGAtt                                                                                                                                       >  1:990821/1‑149 (MQ=255)                  gTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGGaaaaaaaaaaaagtggaaac                                                                                                                                      >  1:725076/1‑133 (MQ=255)                        tGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGGAAAACATCCCATGGGGGACCAGGTGcac                                                                                                                              >  2:224430/1‑149 (MQ=255)                          gCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGcc                                                                                                                          <  2:439296/151‑1 (MQ=255)                           cTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAATCCAAAGTGGGTCCAGTTGCACAGcc                                                                                                                          >  1:45549/1‑150 (MQ=255)                               cAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTg                                                                                                                     <  1:465449/151‑1 (MQ=255)                               cAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAATATGGGTCCCGGTGCCCAGGCaac                                                                                                                       >  2:124147/1‑147 (MQ=255)                                aGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAAACCCATGTGGATCCAGTTGCCCAGCCATCTgg                                                                                                                    >  1:93854/1‑151 (MQ=255)                                   gcgcCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAAACAAAGTGGGTCCAGTTGCACAACCATCTGGAt                                                                                                                  >  1:788164/1‑150 (MQ=255)                                    cgcCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAAAGTGGGTCCAGTTGCACAGCCATCTgggt                                                                                                                  >  1:941970/1‑147 (MQ=255)                                             gcagcGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGGAAAAAAACCCAAGAGGGTCCCGCTTCCCAGCCATCCGGAGGAc                                                                                                               >  2:643134/1‑143 (MQ=255)                                             gcagcGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTa                                                                                                       <  1:1048323/151‑1 (MQ=255)                                              cagcGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAAAGTGGGTCCAGTTGCACAGCCATCTGGATGACAGcc                                                                                                           >  1:693940/1‑146 (MQ=255)                                               agcGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGGAAAAAAACCAAAGTGGGTCCCGTTGCACAGCCCTCTTGGTGACAACCTGTAt                                                                                                      >  2:125430/1‑150 (MQ=255)                                                   aaaGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGGAAAAAAACCCATGTGGGTACCGTTGCTCAGCCCTCTGGGTGACa                                                                                                              >  2:285458/1‑138 (MQ=255)                                                   aaaGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAATACAAAGGGGGACCAGGTGGACAGCCAACTGGATGAAAGACTGTATCGCa                                                                                                  >  1:739631/1‑150 (MQ=255)                                                    aaGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCaaa                                                                                                <  1:1120314/151‑1 (MQ=255)                                                     aGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAag                                                                                               <  1:1016092/151‑1 (MQ=255)                                                     aGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAATGTGGGTCCAGTTGCCCAGCCCTCTTGATGACAGCCTGTATCGCaaa                                                                                                >  1:555740/1‑150 (MQ=255)                                                      gCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAaga                                                                                              <  1:364136/151‑1 (MQ=255)                                                         gTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGt                                                                                            <  2:242626/150‑1 (MQ=255)                                                         gTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTg                                                                                           <  1:350743/151‑1 (MQ=255)                                                          tGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAATGTGGGTCCAGTTGCACAGCCATCTGGATGGCAGCCCGTATCGCAAAGAgggg                                                                                          >  2:374871/1‑151 (MQ=255)                                                             cATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAAACAAAGTGGGACCCGTTGCACAGCCACCTGGGTGACAACCCGTATCGCCAAAAGGGGtt                                                                                        >  1:688386/1‑150 (MQ=255)                                                              aTGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGTAAAACAAAACAATGTGGGTCCCATTGCACAGCCATCTGGGAGACAATCTCTGTCGCAAAAAgggg                                                                                          >  1:1044823/1‑147 (MQ=255)                                                                   gTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGAt                                                                                 <  2:725054/151‑1 (MQ=255)                                                                   gTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAATGCTAAATGGAACCAGGTGGGTATACACCTTGGTGACAGCCCCTATGGCAAAAAGTGGGTGGGGGa                                                                                  >  1:162286/1‑150 (MQ=255)                                                                      ccATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATca                                                                               <  2:1074345/150‑1 (MQ=255)                                                                       cATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATcaca                                                                             <  2:673888/151‑1 (MQ=255)                                                                         tctcGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAATTGGGGTCCAGTTTGCCAGCCACCTGGATGAGCGCCTGTATCACCAAGAGAGGTTGGGGGATCACaa                                                                            >  1:886156/1‑150 (MQ=255)                                                                            cGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACaa                                                                            <  1:333447/147‑1 (MQ=255)                                                                            cGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAAc                                                                          <  2:176133/149‑1 (MQ=255)                                                                            cGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACa                                                                         <  1:731715/150‑1 (MQ=255)                                                                            cGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACa                                                                         <  2:179939/150‑1 (MQ=255)                                                                               tATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGGTCCAGTTGCACAGCCATCTGGATGACAGCCCGTATTGCAAAGAGGGGGTGGGGGGTCACaaaaa                                                                         >  1:416551/1‑145 (MQ=255)                                                                               tATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAATCAAATTGGATCCCGCTTCTCACCCCTCCGGGTGAAAACCCGTTTCGCAAAGTGTGGGTGGGGGATCACAAAc                                                                          >  2:334934/1‑146 (MQ=255)                                                                                aTTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATc                                                                     <  1:58956/150‑1 (MQ=255)                                                                                  tGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCt                                                                   <  1:1007782/150‑1 (MQ=255)                                                                                     cGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTcgcc                                                               <  2:397065/151‑1 (MQ=255)                                                                                        aGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAATTCAAAGTGGATACAATTTCACAGCCCTCTGGAATACAACCTGTATCACAAAGAAGGGGTGGGGGGACACAAACAGATACTCGCcccg                                                            >  1:280228/1‑151 (MQ=255)                                                                                              gCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATc                                                      <  1:638859/151‑1 (MQ=255)                                                                                                  aaCAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAATGTGGATCCAGTTGCACAGCCCTCTGGGTGACAGCCTGTATCGCAAAGAGTGGGTGGGCGGTCACAAACAGATCCTCGCCGCGTTAATCaaa                                                   >  1:406117/1‑150 (MQ=255)                                                                                                   aCAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAAACCATGTGGGTCCAGGTGCAAAACCATCTGGATGAAAGCCCGTATTGCCAAGAGGGGGTGGGCGATCCCAAACAGAACCTCGCCGCGGTAATTaaaa                                                  >  1:15862/1‑150 (MQ=255)                                                                                                    cAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAACCCTCTGGATGACAGCCTGTATCGCCAAGAGGGGGTGGGCGATCACAAAAAGATCCTCGCCGCGGTAATCaaaaa                                                 >  1:552992/1‑150 (MQ=255)                                                                                                     aGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAg                                               <  1:620673/151‑1 (MQ=255)                                                                                                       cATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGAt                                             <  2:1114544/151‑1 (MQ=255)                                                                                                        aTGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAATGTGGATCCAGTTGCACAGCCATCTGGGTGACAGCCTGTATCGCAAAGAGGGGGTGGGCGATCCCAAACAGATCCTCGCCCCGTTTATCaaaaaa                                                >  1:115736/1‑147 (MQ=255)                                                                                                          gCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGc                                           <  2:14597/150‑1 (MQ=255)                                                                                                           cTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAAACCAATGTGGATCCCGTTGCACAGCCATCTTGATGACAGCCTGTATTGCCAAGAGGGGTTGGGCGATCACAAACAAAACCTCGCCCCGCTAATCAAAAAAAAAGccc                                         >  1:536245/1‑151 (MQ=255)                                                                                                             ggtggAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAAAACAATGTGGGTCCCGTTGCACAGCCATCTGGATGACAGCCTGTCTCTCAAAAAGTGGTTGGGCGGTCACAAACAGAACCTCGCCGCGTTAATCAAAAAAAATGccc                                         >  2:465486/1‑149 (MQ=255)                                                                                                                ggAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAAAAATCCAAAGTGGGTCCAGGTGCACAGCCATCTGGATTACAGCCTGTATCGCAAAGAGGGGGTGGGGGATCACAAACAAATACTCGCCGCGGTTATTAAAAAAAATGgcc                                         >  1:778449/1‑146 (MQ=255)                                                                                                                   gCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAgcggcg                                 <  2:915669/151‑1 (MQ=255)                                                                                                                       ttCCGTCAGTCCTGGCAGTGGCGGGGAAAAAAACCCATGTGGGTCCAGTTGCACAGCCCTCTGGGTGAAAGCCCGTATCGCAAAGAGTGGGTGGGGGGTCACAAACAGAACCTCCCCGCGTTAATTAAAAAAAATGCCCgggggg                                   >  2:343796/1‑140 (MQ=255)                                                                                                                        tCCGTCAGTCCTGGCAGTGGCGGGGAAAAAAACCAATGTGGGTCCCGTTGCACAGGCATCTGGGTGGAAGGCTGTATCGCAAAGAGGGGGTGGGGGGTCACCAAAAGAACCTCGCCGCGGTTATTAAAAAAAAAGCCCGGtcggcggaacg                            >  2:442305/1‑146 (MQ=255)                                                                                                                         ccGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCt                            <  2:472589/150‑1 (MQ=255)                                                                                                                         ccGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTg                           <  2:825245/151‑1 (MQ=255)                                                                                                                                 ccTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAAtgtg                   <  2:18997/151‑1 (MQ=255)                                                                                                                                    ggCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTgg                  <  2:847809/149‑1 (MQ=255)                                                                                                                                    ggCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGgc                 <  1:1109908/150‑1 (MQ=255)                                                                                                                                          ggCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGGCAGCATc           <  2:1011521/150‑1 (MQ=255)                                                                                                                                            cGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGGCAGCATCTgg        >  1:506280/1‑151 (MQ=255)                                                                                                                                                  aaCAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGGCAGCATCTGGAAAACg  >  2:621062/1‑151 (MQ=255)                                                                                                                                                  aaCAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGGCAGCATCTGGAAAACg  >  1:328038/1‑151 (MQ=255)                                                                                                                                                    |                                                                                                                                                     ATTGCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGGCAGCATCTGGAAAACG  >  NC_000913/4554959‑4555254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑