Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,469,886 IS1 (–) +9 bp coding (756‑764/1332 nt) gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1978503 =NA (NA)106 (1.170) 85/298 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 2469894 0 (0.000)coding (764/1332 nt) gtrS serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
* ? NC_000913 = 1979270NA (NA)112 (1.240) 87/298 0.0 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 2469886 = 0 (0.000)coding (756/1332 nt) gtrS serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Only 100 of 218 total aligned reads displayed.

AACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTA  >  NC_000913/2469744‑2470043
                                                                                                                                                      |                                                                                                                                                     
aaCTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGcc                                                                                                                                                       >  2:696707/1‑151 (MQ=255)
        gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATg                                                                                                                                               <  2:309153‑M2/17‑1 (MQ=255)
        attaAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatg                                                                                                                                                >  2:726549‑M2/1‑143 (MQ=255)
           cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGtt                                                                                                                                             >  2:478553‑M2/132‑150 (MQ=255)
            aaTCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactcc                                                                                                                                           <  2:736405‑M2/151‑13 (MQ=255)
             gcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTtgat                                                                                                                                          >  2:169125‑M2/130‑151 (MQ=255)
             aTCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactcc                                                                                                                                           <  2:1154460‑M2/150‑13 (MQ=255)
                tGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAACGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaact                                                                                                                                       <  1:826654‑M2/151‑17 (MQ=255)
                  gcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATa                                                                                                                                      >  2:851397‑M2/125‑150 (MQ=255)
                      ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAgtg                                                                                                                                  <  2:139877‑M2/30‑1 (MQ=255)
                        gCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgat                                                                                                                                <  2:1117760‑M2/150‑24 (MQ=255)
                             gtgtGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgtt                                                                                                                          >  1:772322‑M2/1‑122 (MQ=255)
                             gtgtGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgtt                                                                                                                          >  2:1052787‑M2/1‑122 (MQ=255)
                                 caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGa                                                                                                                      <  1:62027‑M2/42‑1 (MQ=255)
                                  accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGtt                                                                                                                         >  1:1071988‑M2/109‑147 (MQ=255)
                                  accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGAt                                                                                                                     <  1:1245085‑M2/43‑1 (MQ=255)
                                         gcGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                              >  2:1081520‑M2/1‑110 (MQ=255)
                                         gcGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                               >  2:891381‑M2/1‑110 (MQ=255)
                                          cGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                              >  2:439642‑M2/1‑109 (MQ=255)
                                             agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGtaa                                                                                                          <  2:131488‑M2/54‑1 (MQ=255)
                                              aaTATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                                         <  2:54715‑M2/151‑47 (MQ=255)
                                              aaTATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                                         <  1:453332‑M2/151‑47 (MQ=255)
                                              aaTATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                                         <  1:928916‑M2/151‑47 (MQ=255)
                                                 atTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                                                                      <  1:1230754‑M2/151‑50 (MQ=255)
                                                   tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAAtt                                                                                                    >  1:1185297‑M2/92‑151 (MQ=255)
                                                    gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTc                                                                                                   <  2:688780‑M2/61‑1 (MQ=255)
                                                     gCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                                   >  2:965224‑M2/1‑98 (MQ=255)
                                                      cAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                                                                 <  2:826160‑M2/151‑55 (MQ=255)
                                                        atatCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                                                                               <  1:687291‑M2/151‑57 (MQ=255)
                                                        atatCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                                                                               >  2:650784‑M2/1‑95 (MQ=255)
                                                         tatCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                              <  2:42617‑M2/151‑58 (MQ=255)
                                                           agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACatat                                                                                            <  1:1092002‑M2/68‑1 (MQ=255)
                                                              tATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                          >  2:834726‑M2/1‑89 (MQ=255)
                                                                ttCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                                       <  2:221454‑M2/151‑65 (MQ=255)
                                                                  gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTgg                                                                                     <  2:52549‑M2/75‑1 (MQ=255)
                                                                  cAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                                      >  1:1171316‑M2/1‑85 (MQ=255)
                                                                   aaaaGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                                    <  2:447926‑M2/151‑68 (MQ=255)
                                                                    tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCAttt                                                                                       <  2:267510‑M2/73‑1 (MQ=255)
                                                                             gttgAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                                                                          >  1:736425‑M2/1‑74 (MQ=255)
                                                                             cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCaa                                                                          <  2:49116‑M2/86‑1 (MQ=255)
                                                                              ttgAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt                                                                         <  1:245490‑M2/151‑79 (MQ=255)
                                                                               tgAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                                        <  1:125128‑M2/151‑80 (MQ=255)
                                                                               gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAAc                                                                         >  1:1057982‑M2/64‑150 (MQ=255)
                                                                                gAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                                       >  2:515573‑M2/1‑71 (MQ=255)
                                                                                 aaTTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                                      >  2:938065‑M2/1‑70 (MQ=255)
                                                                                  gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGaa                                                                     <  1:98080‑M2/91‑1 (MQ=255)
                                                                                  gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGa                                                                      >  1:868608‑M2/61‑150 (MQ=255)
                                                                                  gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGa                                                                      >  2:1239653‑M2/61‑150 (MQ=255)
                                                                                    cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGt                                                                   <  1:303229‑M2/93‑1 (MQ=255)
                                                                                     actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCGTCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAGGtt                                                                  >  1:230588‑M2/58‑151 (MQ=255)
                                                                                          aGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                               <  1:1189835‑M2/149‑89 (MQ=255)
                                                                                           gTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                            >  1:667341‑M2/1‑60 (MQ=255)
                                                                                            tACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg                                                           <  1:827846‑M2/151‑93 (MQ=255)
                                                                                            cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGACGCAACCCCAACAGAAGTTGGAACgg                                                           >  2:722776‑M2/51‑151 (MQ=255)
                                                                                             acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACgg                                                           >  2:679530‑M2/50‑150 (MQ=255)
                                                                                             acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGa                                                          <  1:1367497‑M2/102‑1 (MQ=255)
                                                                                                 caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGt                                                      >  2:193020‑M2/46‑151 (MQ=255)
                                                                                                  aaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGtt                                                     >  2:561779‑M2/45‑151 (MQ=255)
                                                                                                    aaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTc                                                   <  1:1012685‑M2/109‑1 (MQ=255)
                                                                                                    aaacaccatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTc                                                   <  1:719444‑M2/109‑1 (MQ=255)
                                                                                                    aaCATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                                   >  2:1298673‑M2/1‑51 (MQ=255)
                                                                                                     aCATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc                                                  <  2:229720‑M2/151‑102 (MQ=255)
                                                                                                        accatcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAAt                                               >  1:9534‑M2/39‑151 (MQ=255)
                                                                                                         aCTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccc                                                <  2:340683‑M2/149‑104 (MQ=255)
                                                                                                         aCTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccc                                                <  1:1305083‑M2/149‑104 (MQ=255)
                                                                                                            tcatacactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAAtctc                                            >  1:1148126‑M2/35‑150 (MQ=255)
                                                                                                              ggTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                                         <  2:898724‑M2/151‑111 (MQ=255)
                                                                                                              ggTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                                         >  1:643016‑M2/1‑41 (MQ=255)
                                                                                                              agtAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                                         <  2:456532‑M2/150‑111 (MQ=255)
                                                                                                                acactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATaaa                                       <  1:1332999‑M2/121‑1 (MQ=255)
                                                                                                                 cactaaatcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATaa                                        >  1:248148‑M2/30‑149 (MQ=255)
                                                                                                                   ttATCTTTATATGAAAAACAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagg                                    <  2:298691‑M2/151‑116 (MQ=255)
                                                                                                                       atcagtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGaaa                                <  1:727451‑M2/128‑1 (MQ=255)
                                                                                                                           gtaagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACTCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGtt                            <  1:169132‑M2/132‑1 (MQ=255)
                                                                                                                             aagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGtttt                          >  2:780377‑M2/18‑151 (MQ=255)
                                                                                                                             aagttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGttt                           <  1:33497‑M2/133‑1 (MQ=255)
                                                                                                                              agttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTc                         <  1:543025‑M2/135‑1 (MQ=255)
                                                                                                                              agttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTc                         <  2:716986‑M2/135‑1 (MQ=255)
                                                                                                                                ttggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCg                        >  1:416195‑M2/15‑150 (MQ=255)
                                                                                                                                 tggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGa                       >  2:157246‑M2/14‑150 (MQ=255)
                                                                                                                                 aaaaCAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt                      >  1:900079‑M2/1‑22 (MQ=255)
                                                                                                                                 aaaaCAACGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt                      <  2:355275‑M2/151‑130 (MQ=255)
                                                                                                                                  ggcagcatcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAAt                     <  1:404134‑M2/139‑1 (MQ=255)
                                                                                                                                      aacGGGTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt                 <  1:874394‑M2/151‑135 (MQ=255)
                                                                                                                                       catcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCAct                >  1:59325‑M2/8‑151 (MQ=255)
                                                                                                                                         tcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCActct              >  1:799116‑M2/6‑151 (MQ=255)
                                                                                                                                         tcaccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCActct              >  1:354469‑M2/6‑151 (MQ=255)
                                                                                                                                          caccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCtt             <  2:1185270‑M2/147‑1 (MQ=255)
                                                                                                                                          caccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCtt             <  2:329369‑M2/147‑1 (MQ=255)
                                                                                                                                           gTATAAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc            >  2:1010348‑M2/1‑12 (MQ=255)
                                                                                                                                            ccTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAACAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCtttt           >  1:854180‑M2/3‑151 (MQ=255)
                                                                                                                                             cTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCttttt          >  1:1218341‑M2/2‑151 (MQ=255)
                                                                                                                                             cTAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCttttt          >  1:706007‑M2/2‑151 (MQ=255)
                                                                                                                                             ataAAATGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg          <  1:215613‑M2/151‑142 (MQ=255)
                                                                                                                                                aaaTGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctc       >  1:1084075‑M2/1‑7 (MQ=255)
                                                                                                                                                aaaTGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGTGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTAtt       >  2:433382/1‑151 (MQ=255)
                                                                                                                                                 aaTGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctca      >  1:381150‑M2/1‑6 (MQ=255)
                                                                                                                                                  aTGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTgg     >  1:1102619/1‑151 (MQ=255)
                                                                                                                                                     ccATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTa  <  2:577622/151‑1 (MQ=255)
                                                                                                                                                      cATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGtt   >  2:630998/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
AACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTA  >  NC_000913/2469744‑2470043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.