| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,356,201 | 0 | T | G | 41.3% | 144.6 / 11.9 | 76 | T304P (ACC→CCC) | sapA | antimicrobial peptide transport ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base T (6/38); new base G (31/0); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.05e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCC > NC_000913/1356054‑1356342 | cGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGtt < 2:204826/151‑1 (MQ=255) tGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGGGGGGGTaa > 1:242137/1‑150 (MQ=255) gTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTaaa < 2:858010/150‑1 (MQ=255) aTAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGGGGGGGTTAAAtcc > 2:975053/1‑149 (MQ=255) aTAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGcc < 1:1237264/151‑1 (MQ=255) ggCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGa < 2:961499/151‑1 (MQ=255) cccACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGTTAAAAGcc > 1:1125433/1‑146 (MQ=255) cACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGGGGGGTTAAATGCCCGa > 1:1339434/1‑147 (MQ=255) cACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAgg < 2:619768/151‑1 (MQ=255) aCGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGTTAAATGCCAGATaag > 2:1276889/1‑148 (MQ=255) aGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGAc < 2:362487/151‑1 (MQ=255) aGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGAc < 2:294668/151‑1 (MQ=255) cgcgGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGCGGTAAAttacaaaaaggggg > 2:822110/1‑132 (MQ=255) cgGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATc < 2:69094/151‑1 (MQ=255) aaaaTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGGGGTGTTTAAAGCCCGATAGGGGGCGCTCATccc > 2:1228475/1‑149 (MQ=255) aaaTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGTTAAATGCCAGATAGGCGGCGTTCATCCCC‑gg > 1:115858/1‑151 (MQ=255) aaaTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGTTTAATGCCAGATAGGCGACGTTCATCCCC‑gg > 1:1196647/1‑151 (MQ=255) aaaTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGTTAAATGCCAAATAGGCGACGGTCATtcc > 1:1108513/1‑148 (MQ=255) agagGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGc < 2:568446/151‑1 (MQ=255) ccgccgTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGt < 1:889617/151‑1 (MQ=255) gccgTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTa < 1:498122/151‑1 (MQ=255) gccgTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTa < 2:1070807/151‑1 (MQ=255) cgTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTaaa < 1:714449/151‑1 (MQ=255) gTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCGGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAAc < 2:632014/151‑1 (MQ=255) gTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGTTTAAAGCCAAATAGGCGGCGTTTATTCCC‑GGACGCAGCggttaa > 1:241894/1‑145 (MQ=255) tCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGTTAAATGCCAGATAAGGGGCGTTTATCCCC‑GGACGCAGCGGTAAAAGc > 2:135815/1‑150 (MQ=255) aGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGGGGGGTTTAATGCCCGAAAGGCGGCGTTCATCCCC‑GGACGCCGCGTTAAACGCaa > 2:934192/1‑150 (MQ=255) aGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAg < 1:1115804/151‑1 (MQ=255) gCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAgc < 1:1382384/151‑1 (MQ=255) ccGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAgcg < 1:531300/151‑1 (MQ=255) cGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAgcgc < 1:490522/151‑1 (MQ=255) gTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGcgcg < 1:842425/151‑1 (MQ=255) aCCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGGTTAATGCCCGATAAGCGGCGCTCATCCCC‑GGACGCAGCGGTTAAAGCAAACGCggg > 2:1404273/1‑151 (MQ=255) cATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGgtc < 2:83980/151‑1 (MQ=255) ataataGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGTTTAAAGCCAGAAAGGCGCCGATCATCCCC‑CGACGCCGCGCTTAAAGCAAACGCgggggg > 1:362374/1‑148 (MQ=255) aataGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGgtcgtc < 2:847015/151‑1 (MQ=255) aataGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGTTTAAAGCCAGATAGGCGGCGGTCATCCCC‑GGACGCAGCGTTAAACGCAAACGCGGggcgt > 1:1157381/1‑150 (MQ=255) taGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGTTAAATGCCAGATAAGCGACGTTTATCCCC‑CGACGCAACGTTTAACCCAAACCGGGGGCGTCAc > 2:725471/1‑151 (MQ=255) taGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGGTTAATACCCGAAAAGGGGCGGTTATCCCC‑GGGCGCAGGGGTAAAAGCAAGCGCgggg > 2:881940/1‑144 (MQ=255) tGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGGGGGGTTAAATGCCCGATAGGCGACGTTCATCCCA‑AGACGCAGCGGTTAAAGCAAACGCggg > 1:691954/1‑140 (MQ=255) gATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGGTAAAATCCAGATAAGCGGCGGTCATCCCC‑GGGAGCCGCGGTTAAAGCCAACGCGGGGCGTCCCGCcaa > 2:156146/1‑150 (MQ=255) aTTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGGTTAATGCCAGAGAAGCGACGATCAATCCC‑CGATGCAACGTTTTACGCCAGCGCGGGTCGGCACggcaaa > 2:90747/1‑145 (MQ=255) gCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGa < 2:803598/151‑1 (MQ=255) gCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGGTAAATGCCAGAAAGGGGACGTTCCTCCCA‑GGGCGCAGCGGTTAAAGCAAACGCGGGGCGGCACGCAAAAAgg > 1:60790/1‑150 (MQ=255) cAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAg < 1:1388362/150‑1 (MQ=255) aGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGTTTAAAGCCAGAAAAGGGGCGGTCATCCCC‑CGGCGCAGCGGTTAAAGCAAACGCGGGGGGGCCCGCaaaaaaga > 2:1068653/1‑142 (MQ=255) aGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGTTAAAATCCAGAAAAGCGACGGTCCTCCCC‑AGGCGCAGCGTTAAAAGCAAACGCGGGGCGTCCCCCCAAATgg > 2:1143210/1‑145 (MQ=255) aGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAgct < 2:192055/151‑1 (MQ=255) aGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑CGGGGGGTTTAAAGCCAGATAAGGGGCGTTCATCCCC‑CGACGCAGCGGTTAAAACAAACCCGGGGCGGCCCGCCAAAAGGGTAggt > 2:1381985/1‑149 (MQ=255) gcTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAgctggc < 1:1374001/150‑1 (MQ=255) tattaATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGgcag < 2:1231591/150‑1 (MQ=255) attaATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGgcagc < 2:1396851/150‑1 (MQ=255) gCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGca‑ggccagg < 2:141951/151‑1 (MQ=255) aGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGGGGGGGTAAATGGCCGATAGGGGACGGTTCTCCCA‑GGACGCAGCGGTAAAAGCAAGCGCGGGGCGGAACGCAAAATGGATAGCTGGGTGgcagcaag > 1:930492/1‑141 (MQ=255) aGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑ggccaggcca < 2:1118330/151‑1 (MQ=255) tGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGTTAAAAGCCAGATAGGCGACGGTCATCCCC‑GGGCGCAGCGTTAAACGCAAACGCGGGGCGTCACGCCAAATGGGTAGCTGGCTGGCAGCa‑agccaggcc > 1:1379636/1‑148 (MQ=255) gCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGaa < 2:87197/151‑1 (MQ=255) ccAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGCTT‑GGCGGGGGTAAATATCCGAAAGGCGGCGTTTAACCCC‑CAAAGCAGCGGTAAACGCAAGCGCGGGGCGGCCAGCAAAATGGAAAACCGGGTGGGCGCa‑cgccaggcccg > 2:860823/1‑146 (MQ=255) cAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGCTT‑GGGGGGGTTTAAAGGCAAAGAGGCGACGGTCCTCCCACGGAC‑CACCGGTTAACGCAAACGGGGGGTGCCCCGCACAATGGGGAGCTGGGGGGGAACa‑ggccaggcc > 1:514657/1‑145 (MQ=255) gcATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑TGCGGGGGTAAATGCCAGAGAGGGGGCGTTTATCCCC‑GGGCGCAGCGGTAAAAGCAAGCGCGGGGCGGCACGCAAAATAGATAGCTGGCTGGGAGCA‑GGGCCGGCCAGAACg > 2:392471/1‑147 (MQ=255) gcATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGc < 2:159320/151‑1 (MQ=255) aTGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCa < 1:1118280/150‑1 (MQ=255) cGGACAGCGGGATTATTTAGCGGCGGTTT‑GGGGGGGTTAAATGGCACATAAGCGGCGATCATCCCA‑GGACGCAGCGGTAAAAGCCAACGCGGGGGGGCACGCAAAAAGGATAGCCGGCTGGGAGCA‑GGGCCGGCCCGAAAGTCGCATTtcc > 1:1146491/1‑151 (MQ=255) ggACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTcccc < 2:56799/151‑1 (MQ=255) ggACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTcccc < 1:592420/151‑1 (MQ=255) gACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGGGGTTAATGACAGAGAGGGGACGGTCATCCCC‑GGACGCAGCGTTAAAAGCAAGCGGGGGGCGTGACGCCAAAAGGAGAACTGGCCGGCGGCA‑GGCCCGGCGCGAACGCCGCATTcccc > 2:286789/1‑150 (MQ=255) aCAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGGTAAAAATCAGATAGGGGACGTTTATCCCA‑GGGCGCAGCGGTAAAAGCAAACGCGGGGCGTCACGCAAAAAGGATAACTGGCTGGCAGCA‑GGGCAGGGCCGAACGGCGCAATcccc > 2:1147035/1‑149 (MQ=255) aGCGGGATTATTTAGCGGCGGTTT‑TGCGGTGGTAAATGCCAGATAGGCGACGTTTATCCCC‑GGACGCAGCGTTAAAAGCAAACGCGGGTCGTCACGCAAAATGGAAAGCTGGGTGGGAGCAGGGCCGGGCCA‑AACGTCGCATTtccc > 2:495145/1‑147 (MQ=255) gCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCa < 2:322843/151‑1 (MQ=255) cGGGATTATTTAGCGGCGGTTT‑GGCGGGGTTAAATGCCAGAAAAGCGGCGGTTATCCCC‑GGGCGCAGCGTTAAACGCAAGCGCGGGGCGGCACGCAAAAAGGATAGCTGGGTGGGCGCC‑GGGCCGGCCCGAACGGCGCCTTtccc > 2:1233320/1‑145 (MQ=255) gggATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCAgg < 1:573218/151‑1 (MQ=255) tAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGa < 2:241887/150‑1 (MQ=255) aGCTGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGAc > 2:666941/1‑150 (MQ=255) aGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGAc < 1:332675/150‑1 (MQ=255) ggTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTc > 1:162544/1‑151 (MQ=255) gTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTcc > 1:293270/1‑151 (MQ=255) | CGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTT‑GGCGGTGTTAAATGCCAGATAGGCGACGTTCATCCCA‑GGACGCAGCGTTAAACGCAAGCGCGGGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCA‑GGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCC > NC_000913/1356054‑1356342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |