| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,574,051 | 0 | G | T | 44.0% | 161.2 / 38.9 | 85 | V384V (GTC→GTA) | pqqL | putative periplasmic M16 family zinc metalloendopeptidase |
| Reads supporting (aligned to +/- strand): ref base G (5/42); new base T (37/0); total (43/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAATTTTAACGCTGCGC > NC_000913/1573907‑1574201 | tttCGAAAGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTAcatc > 2:172757/1‑150 (MQ=255) tCGAAAGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGAcatcat < 2:1257843/150‑1 (MQ=255) tCGAAAGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGAcatcat < 1:858432/150‑1 (MQ=255) aaaGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTAcatca > 1:869194/1‑146 (MQ=255) aaaGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGAATTTAcaacattgtg > 2:1067481/1‑147 (MQ=255) aGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑Gtt < 2:822131/151‑1 (MQ=255) aGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAAATTTTAAATTATCG‑A‑Gtt > 1:211120/1‑151 (MQ=255) atGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTcagc < 1:206674/151‑1 (MQ=255) tGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTcagc < 1:418307/150‑1 (MQ=255) gTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTcagcag < 2:28217/151‑1 (MQ=255) gTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTcagca < 1:554136/150‑1 (MQ=255) tctTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAAATTTTACATCATCG‑A‑GGTCTTCAGCAGaa > 2:989134/1‑150 (MQ=255) ttCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGTGAGATTTTACATCATCG‑C‑GAGCTTTCGCAGaaa > 2:764730/1‑149 (MQ=255) cGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCa < 1:501552/151‑1 (MQ=255) ggCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCAt < 2:13844/151‑1 (MQ=255) cGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTACATCATCG‑A‑GTTCTTTTGCAGAAAAAACa > 2:1312004/1‑148 (MQ=255) gACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTTTTTAGCAGaaaaaac > 1:58639/1‑144 (MQ=255) aaCGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTTAATCAACGAA‑TTTTTTCAACA‑AAAAAACATTCTGAt > 2:1382309/1‑148 (MQ=255) aCGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTATATTTTACATCATTC‑A‑GTTTTTCAGCAGGAAAAACaagttggt > 1:99857/1‑140 (MQ=255) aCGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAt < 2:285947/151‑1 (MQ=255) aCGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAt < 1:764602/151‑1 (MQ=255) cGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑g < 1:752699/151‑1 (MQ=255) cGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTGCATTATCC‑A‑GTTTTTCAGAAGAAAAAACAAGCTGGTC‑AAt > 2:152459/1‑150 (MQ=255) gTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTg < 1:691330/151‑1 (MQ=255) gTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTg < 2:506914/151‑1 (MQ=255) tattatTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTAAATCATCG‑A‑GTTTTTTTGCAGAAAAAACATGCTGGTC‑AAT‑gggt > 2:230793/1‑147 (MQ=255) ttAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAAct < 1:762668/150‑1 (MQ=255) tAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTTCATCATCC‑A‑GGTTTTTTGCAGAAAAAACAAACTGATC‑AATGGGTTGCCa > 2:81696/1‑147 (MQ=255) aaTGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTACATCATCG‑A‑GTTTTTCAGCCGAAAAAACATGCTGATC‑AAT‑GGGTGccca > 2:688207/1‑144 (MQ=255) aaTGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGAGTTTTCATCATCG‑A‑GTTCTTCAGCAGAAAAAACATGCTGATC‑AAT‑TGGTGCCCAatct > 2:380477/1‑150 (MQ=255) cTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTACATCAACA‑C‑GTTTTTCATCTGAAAAAACATGCTGATC‑AAT‑CGTTGGCCACACTGCCAtt > 1:1417421/1‑150 (MQ=255) cAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTACATCATCG‑A‑GGTTTTTAGCAGAAAAACCAAGCTGGTT‑AAA‑TGGTGCCAACTCTGCCCTTAATGCAtt > 1:531213/1‑150 (MQ=255) cAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTACATCATCG‑A‑GGTTTTCAGCAGAAAAAACATGCTGCTC‑AAT‑GGTTTCCCACTCTGCCCTTAAAGCAtt > 1:1220546/1‑150 (MQ=255) cAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTc < 1:1003171/151‑1 (MQ=255) aGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCg < 1:984023/151‑1 (MQ=255) cGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTTCATCATCG‑A‑GTTTTTTAGCAGAAAAAACAAGCTGATC‑AAA‑GGTTTCCCAATCTTCCCTTTATGCATTCgc > 1:902740/1‑149 (MQ=255) cGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCgcag < 2:303670/151‑1 (MQ=255) cGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCgcag < 1:423445/151‑1 (MQ=255) aCTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTACATCATCG‑A‑GGTCTTTAGCAGAAAAAACATGCTTGTC‑AAA‑GGTTGCCCACCCTGCCCTTAAAGCATTCccagc > 1:1334524/1‑150 (MQ=255) cTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTACATCATCG‑A‑GGTCTTTAGCAGAAAAAACATGCTGGTT‑AAT‑GGGTGCCCAATCTTCCATTAATGCAtt > 1:1169123/1‑143 (MQ=255) tGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGCTAAATTTCATATAATCA‑A‑ATTCTTTTCTAGAAAAAACAAGCTGATC‑AAA‑TGTTGCCAACCCTCCCATTAATGcgtattcccc > 1:203813/1‑139 (MQ=255) gTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGCAGGTTTTGAATCATCC‑C‑GCTTTTCTGCCGAAAAACCACGCTGATC‑AAA‑TGGTGCTAAATCTGCCATTTATTCATTTGTAGCATcc > 2:306924/1‑150 (MQ=255) cAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTg < 1:15899/150‑1 (MQ=255) cAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTTAATCATCG‑A‑GGTTTTTCTCAGAAAAAACAATCTGGTT‑AAT‑TGGTGGCAAATCCTCCATTTATGCATTCGCAGCATcc > 2:472004/1‑148 (MQ=255) gCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTGAATCATCG‑G‑GGTTTTTTTCAGAAAAAACATGCTGATC‑AAA‑TGTTGCCAAATCTTCCCTTAATTCAtt > 2:1002434/1‑136 (MQ=255) tACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTGCATCATCG‑A‑GTTCTTTAACAGAAAAAACATGCTGATC‑AAT‑GGTTGCCAACTCTTCCATTAATGCATTCGCCGCATCCTTCAtatt > 1:627947/1‑151 (MQ=255) cGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCAtatt < 2:345134/149‑1 (MQ=255) aaTCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTACATCATCG‑A‑GTTCTTTTTCAGAAAAAACCAGCTGGTC‑AAT‑GGTTGCCCACTCTGCCCTTAATGCATTTCCAGCATCCTGCCTATTATTGt > 2:1091214/1‑150 (MQ=255) cACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGtctc < 2:1333843/150‑1 (MQ=255) cGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTTCATCATCG‑A‑GTTCTTTTGCAGAAAAAACAATCCGATC‑AAA‑GGTTGCCAACTCTTCCCTTAATTCATTTGCCGCATCCTCCATATTATCTtctc > 2:317821/1‑148 (MQ=255) cAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCAt < 2:26190/150‑1 (MQ=255) aGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCAttt < 1:570105/151‑1 (MQ=255) aGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTTCATCATCC‑AGGTTTTTTCGCCGAAAAA‑CACGCTGTTT‑AAT‑TGTTTCCCACCCCTCCACTTAAGCATTCTCCGCATTCTCCCTATTTTCTTCTCCGGCAttt > 2:1383402/1‑151 (MQ=255) gCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑G‑GGTTTTTTGCCGAAAAAACATGCTGATC‑AAT‑GGGTGCCCACTCTTCCATTTATGCATTTTCAGCATCCTGCATATTATCTTCTCGTGCAttt > 2:22154/1‑150 (MQ=255) cTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTGCATCAACG‑A‑GGTTTTTTACAGAAAAAACAAGCTGGTCAAAT‑GGTT‑CCCACTCCTCCCTTTATTAATTCGCAGCAACCTGCATTATATTGTCTCggggaatt > 1:590134/1‑142 (MQ=255) tGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTaca < 1:571960/150‑1 (MQ=255) gCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACg < 1:1037106/151‑1 (MQ=255) gCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACg < 1:501677/151‑1 (MQ=255) gCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTGCATCATCG‑A‑GTTTTTCAGCAGAAAAAACAAGCTGATC‑AATGGGTTGCC‑ACTCTTCCCTTAATGCATTTGCAGCATCCTGCATATTTTCGTCTCGTGCAttt > 2:596328/1‑146 (MQ=255) cTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGGAAATTTTACATTAACC‑A‑GTTTTTCTCTAGAAAAACCATTCTGATC‑AAT‑GGGTGTCAACCCTGCCCTTTATGCATTTGCAGGATCCTTAATATTATTGTCTCCTGCATTTTCACg > 1:878640/1‑150 (MQ=255) aTCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTTCATCATCG‑A‑GGTTTTTAGCAGAAAAAACAAGCTGATC‑AAA‑GGTTGGCAACTCTTCCCTTTATACAATTGCAGCAACCCTCCTATTATTGTCTCCTGCATTTTCAAggga > 1:701649/1‑148 (MQ=255) tCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTTACATCATCG‑A‑GTTCTTTAGCAGAAAAAACATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGaaa > 1:314623/1‑150 (MQ=255) cAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGaaaa < 1:414318/150‑1 (MQ=255) cAACCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTTAATCATCG‑G‑GTTCTTCAGCAGAAAAAACATGCTGATC‑AAA‑GGGTGGCCAATCTGCCATTTATGCATTTGCAGCATCCTGCATAATTTCTTTTCGTGCATTTTAACGGaaaa > 1:1162290/1‑150 (MQ=255) aCCGCATTTTTCAGCCAGGTGAGGCGGGGAGATTTTACATCATCG‑A‑GGTTTTTAGCAGAAAAAACATGCTGATC‑AAA‑GGGTGCCAACTCCGCCCTTTATTCATTCGCCGCATCCCGCCTATTATTGTCTCCTGCATTTTCACCGaaaaa > 2:347974/1‑149 (MQ=255) gCATTTTTCAGCCAGGTGAGGCGGTTAAATTTTACAAAATCG‑A‑GGTCTTCAACAGAAAAAACCTGCTGATC‑AAT‑AGTTGCCAACTCTTCCCTTAATGCATTCGCAGCATTCTGCCTATTTTCGTCTCCTGCATTTTCACGGAAAAACa > 1:863129/1‑148 (MQ=255) cATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGa < 1:726733/151‑1 (MQ=255) cATTTTTCAGCCAGGTGAGGCGGGGAGATTTTACATCATCG‑A‑GTTTTTTTGCCGAAAAAACATGCTGATC‑AAT‑GGGTGCCCAATCTGCCATTAATGCATTCGCCGCATCCTGCCTATTATTGTTTCGTGCCTTTTAACGGgaaaa > 2:767932/1‑145 (MQ=255) ttttCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAA‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACt < 1:706886/150‑1 (MQ=255) tttCAGCCAGGTGAGGCGGGGAGATTTTACATCATCC‑A‑GGTTTTTAGCCGAAAAAACCAGCTGATC‑AAT‑GGTTGCCAACTCTTCCCTTAATGCATTTGCAGCATCCCTCATATTATTCTCTCCTGCATTTTTACGGgaaaaaa > 1:426776/1‑141 (MQ=255) ttCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGa < 1:508366/150‑1 (MQ=255) caggcaggTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATaa < 1:448036/151‑1 (MQ=255) aGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAAt < 1:1297933/151‑1 (MQ=255) aGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAAt < 1:172764/151‑1 (MQ=255) cAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCgg < 1:8438/151‑1 (MQ=255) ggTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGt < 1:750836/151‑1 (MQ=255) aGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCaa < 1:891823/151‑1 (MQ=255) ggCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAAt < 1:252897/151‑1 (MQ=255) cGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAAttt < 2:58639/151‑1 (MQ=255) gggTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAAtttt < 2:898788/151‑1 (MQ=255) tAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAATTTTAAc > 1:624958/1‑151 (MQ=255) aGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAATTTTAACg < 2:371280/151‑1 (MQ=255) aGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAATTTTAACg > 1:687430/1‑151 (MQ=255) aTTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAATTTTAACGCt < 2:1304604/151‑1 (MQ=255) tGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAATTTTAACGCTgcg > 1:509516/1‑151 (MQ=255) gACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAATTTTAACGCTgcgc < 2:90996/151‑1 (MQ=255) | TTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCATTTTTCAGCCAGGTGAGGCGGGTAGATTTGACATCATCG‑A‑GTTCTTCAGCAGAAAAACCATGCTGATC‑AAT‑GGTTGCCAACTCTGCCATTAATGCATTCGCAGCATCCTGCATATTATCGTCTCGTGCATTTACACGGAAAAACAGCGACTGATAATCGGGTGCAATTTTAACGCTGCGC > NC_000913/1573907‑1574201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |