Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,825,061 | 0 | G | A | 41.9% | 128.7 / 55.5 | 93 | intergenic (‑124/+79) | ves/spy | cold‑ and stress‑inducible protein/periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
Reads supporting (aligned to +/- strand): ref base G (48/6); new base A (0/39); total (48/45) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.32e-20 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 102 total aligned reads displayed.
TTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAG > NC_000913/1824914‑1825207 | tttACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaagaa < 2:258597/150‑1 (MQ=255) ttACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaagaaa < 2:1340033/150‑1 (MQ=255) ttACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaagaaa < 1:682767/150‑1 (MQ=255) aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑ct < 2:765413/151‑2 (MQ=255) aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑c < 1:1232430/150‑1 (MQ=255) cATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑ccgcc < 1:887078/151‑1 (MQ=255) atatCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑ccgccg > 1:1058122/1‑151 (MQ=255) tCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATc > 1:755847/1‑151 (MQ=255) aaaTTATTCCATCCCCCCTCCCGCCCCTTTTTTTTCTTTGTTTTCTTTAAGGTACCCGTGGAGGGTTATCGCCAACTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTTTTTGAGAAGAAAAAAAAAAA‑CCGCCGATc < 2:1008333/149‑1 (MQ=255) aaaGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCt > 1:233130/1‑151 (MQ=255) aGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGt > 1:223735/1‑151 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGGGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCAcc > 2:1075952/1‑151 (MQ=255) ccATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTTCGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGTAAAGAAAA‑CCGCCGATCCTGTCCAcc > 2:881254/1‑150 (MQ=255) ccATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCg > 2:1338327/1‑151 (MQ=255) ccATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCg > 2:846388/1‑151 (MQ=255) aTACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGc > 1:15200/1‑150 (MQ=255) aTACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGc > 1:533317/1‑150 (MQ=255) cccccccGGCCTTTTCTTTTCATTGTTATCTTTCAGGTAACCGTGGATGTTTATCGGCACCTGGGGTTATTTCCGTTAGTGGTGATCAGGTTTTTTTTACAATTGTTTGAGAAAAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCa < 1:271058/142‑1 (MQ=255) gCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTg > 2:713020/1‑151 (MQ=255) cTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGCTGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGc > 2:1020102/1‑151 (MQ=255) cTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGc > 1:471297/1‑151 (MQ=255) cccGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCa > 2:1279270/1‑150 (MQ=255) ccGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCa > 2:1336576/1‑149 (MQ=255) ccGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCa > 1:316505/1‑149 (MQ=255) cGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAgg > 2:1344283/1‑151 (MQ=255) ggCCCGTTCTTTTCATTTTTATCGTTCAGGTACCCGGGGATGTTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAATTGTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAgg < 1:23948/150‑1 (MQ=255) gccccTTTTTTTTCTTTTTTTTCGTTCAGTTAACCGTGGTTGGTTATCGGCAACTGGGGTGTTTTACTTTAGTGGTGACCGGGTTTTTTTTACACCTTTTGGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGt < 2:1204597/149‑1 (MQ=255) gCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGt > 2:840355/1‑150 (MQ=255) gCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGt > 1:489456/1‑150 (MQ=255) cgttttttttCATTGTTTTCTTAAAGGTATCCGGGGATGGTTTGCGCAAACTCGGTGGATTTACGTTGGTGGTATCCAGCTTTTTTTTACACCTGTTGGAAAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGt < 2:1111097/145‑1 (MQ=255) cGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTg > 1:547263/1‑151 (MQ=255) gTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTgg > 2:922462/1‑151 (MQ=255) ttCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTgg > 2:1141939/1‑150 (MQ=255) cTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGAc > 1:567335/1‑150 (MQ=255) ttttCTTTTTTATCGTTAGGGTACCGGGGGTTTTTTACCGGCAACGGGGTTGTTTTAGGTTAGGGGGGACCAGTTTTTTTTTACAATTGTTGGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACa < 2:1011180/150‑1 (MQ=255) tttagttGTTATCGTTAAGGTACCAGTGAGTGTTTCTCGAAAACGGGGGTGTTTAACGTAGGTGGTGATCGGTTTTTTTTTAAACCTTTTTAGGAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGAc < 1:1107077/143‑1 (MQ=255) tttCTTTTTTATCTTTCGGGTAACCGGGGTTGGTTATCGGCAACTGGGTTGTTTTACGTTAGTGGTGATCGGGTTTTTTTTACACCTTTTGGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACaa < 1:1360932/150‑1 (MQ=255) ttgaTTTTTATGTTTAAGGAAACGGTGGATGGTTATCGGCACTTGGGGTGATTTCAGTTAGGGGTGAAAGGGTTTTTTTTAAAATTGTTGGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGAc < 1:434180/144‑1 (MQ=255) ttGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcgg > 1:219248/1‑151 (MQ=255) gTTATCGTTCGGGTAACTGGGGATGGTTATGGAAACCTGGGTTAATTTACGTTAGGGGTGATCGGTTTTTTTTTACAACTTTTTAAGAAAAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcgg < 1:1377695/149‑1 (MQ=255) ttATCGTTCAGGTACCGGTGGATGTTTATCGGCACCTGGGGTGTTTTACTTTGGGGGTGATCAGTTTTTTTTTACACCTTTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggc < 2:290955/149‑1 (MQ=255) tATCGTTCAGGTACCCGTGGATGGTTATCGGCAACTGGGGTGATTTACGTTGGTGGTGATCGGGTTTTTTTTACACCTGTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcgg < 1:1035753/150‑1 (MQ=255) tCGTTCAGGTACCCGTGGATGTTTATCGGCAACTGGGGTGTTTTACGTTAGTGGTGATCGGGTTTTTTTTACAACTTTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTc < 1:103110/150‑1 (MQ=255) cGTTCAGGAAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGCTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCt > 1:1140924/1‑150 (MQ=255) cAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCttta > 2:1244303/1‑147 (MQ=255) ggaacccGTGGATGTTTATCGACAACTGGGGTGTTTTCCTTTAGTGGTGATAAGGTTTTTTTAACATCTTTTTGAAAAGAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTaa < 1:421997/142‑1 (MQ=255) tAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGttttt > 1:843008/1‑151 (MQ=255) acccGTGGATGTTTATCGGCATCTGGGGTTTTTTACTTTGGTGTTGACCGGTTTTTTTTTACAATTTTTTGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtttttt < 2:816775/149‑1 (MQ=255) ggATGTTTATCGGCAACTCGGGTAATTTACTTTAGTGGTGATCAGGTTTTTTTTACATCTTTTGGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTgg < 2:367944/147‑1 (MQ=255) ggATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtttttt > 2:537084/1‑145 (MQ=255) gtttACCGGCAACTGGGGTGTTTTACTTTGGTGGTGATCAGGTTTTTTTTACAACTTTTTGAGAAGAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAg < 1:486391/148‑1 (MQ=255) ttttCGGCACCTGGGGTGATTTACGTTAGTGGTGTCCAGGTTTTTTTTACAATTTTTGAAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAg < 1:58331/145‑1 (MQ=255) ttATCGGCAACTGGGGTTTTTTACTTTAGTGGTGATCGGTTTTTTTTAACATTTGTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGa < 2:902748/149‑1 (MQ=255) ttATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatt > 1:1098038/1‑151 (MQ=255) cAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcag > 2:129067/1‑150 (MQ=255) aatcggggTGTTTTACTTTAGTGGTGACCAGGTTTTTTTTACATTTTTTTGAAAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatta < 2:1059146/139‑1 (MQ=255) aaCTGGGGTGTTTTACGTTGGTGGTGACCGGTTTTTTTTTACAATTGTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcagca < 2:1150701/151‑1 (MQ=255) aCTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGGAAGATTATTcagc > 2:801513/1‑149 (MQ=255) ggggTGATTTACGTTAGTGGTGATCGGGTTTTTTTTACACCTGTTGGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTg < 1:435440/150‑1 (MQ=255) cGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTg > 1:711050/1‑151 (MQ=255) gggTGATTTTCGTTGGGGGTGACCGGGTTTTTTTAACACCTTTTTAAAAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTg < 1:846409/150‑1 (MQ=255) gggTGATTTACTTTGGTGGTGATCAGGTTTTTTTAACAACTGTTTGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcagcag < 1:977549/147‑1 (MQ=255) gggTGATTTACTTTAGTGGTGATCGGGTTTTTTTTACAACTGTTTGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTg < 2:524092/150‑1 (MQ=255) gggTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTTTTTGAGAAGAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGtt < 1:322561/149‑1 (MQ=255) gggTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTTAGTTTTTTGGCTGAAAGATTATTCAGCAGtt > 2:728468/1‑149 (MQ=255) tGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAgg > 2:821768/1‑151 (MQ=255) tGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAgg > 2:1017396/1‑151 (MQ=255) tttACGTTAGGGGTAATCGGGTTTTTTTAACAATTGTTGAAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAgg < 2:881011/148‑1 (MQ=255) ttACGTTAGGGGTGATCGGTTTTTTTTTCCATCTTTTGGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCa < 1:915242/149‑1 (MQ=255) tACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGCCTTAAGTTTTTTGGCTGAAAGATTATTTAGCAGTTGCAGGCAttt > 2:777664/1‑151 (MQ=255) gtggtgATCAGTTTTTTTTTACAACTTTTGGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCt < 2:205235/149‑1 (MQ=255) gtggtgATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCttt > 2:1236107/1‑151 (MQ=255) ggtgATCGGTTTTTTTTTACAATTGTTGGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCttt < 2:1140492/149‑1 (MQ=255) agtttttttttACAATTGTTTGAGAGAAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCt < 1:1110752/145‑1 (MQ=255) ggCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTgg > 1:816411/1‑150 (MQ=255) gCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTTAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCtttt > 1:1395353/1‑141 (MQ=255) tttttttACAACTGTTTGA‑AAGAAAAAAAAAAAGCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCtttt < 2:1395327/139‑1 (MQ=255) ttttttACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGtt > 1:560431/1‑151 (MQ=255) ttttttAAATCTTTTTGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGt < 2:15201/150‑1 (MQ=255) tttttACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGtt > 2:802779/1‑150 (MQ=255) ttttACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTTGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTTCCGCTGGACGTTCt > 2:1115385/1‑151 (MQ=255) tACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTc > 1:1151486/1‑151 (MQ=255) aCAACTGTTTGAGAAGGGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAGAGATTATTCAAGAGTTGGAGGCATTTTACCTTTTGGCGCTGGAAGGTCTGt > 2:947331/1‑149 (MQ=255) aattGTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTccg < 2:632685/143‑3 (MQ=255) aaCTGTTGGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGa < 1:1338354/151‑1 (MQ=255) ttGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCtt > 2:244397/1‑150 (MQ=255) tggagaaaaaaaAAAAAAT‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACg < 1:1228662/145‑1 (MQ=255) tgaaaaaaaaaaaagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGc < 1:1115858/138‑1 (MQ=255) gagaagagaaAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTTCCGCTGGACGTTCTGTCAGACGCTtct > 2:318258/1‑150 (MQ=255) agaagaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtct < 1:1109758/149‑1 (MQ=255) aaaagaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtctc < 1:1244331/148‑1 (MQ=255) aagaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaa < 2:1094493/151‑1 (MQ=255) aagaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCa < 1:968971/149‑1 (MQ=255) aagaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCa < 2:342421/149‑1 (MQ=255) agagaaAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaa > 1:779690/1‑150 (MQ=255) aaaaaagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAAt < 2:957943/148‑1 (MQ=255) aaaaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaaa < 2:471285/147‑1 (MQ=255) aaaaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAAt < 2:581874/148‑1 (MQ=255) aaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAg < 1:793797/151‑1 (MQ=255) aaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAg < 2:187071/151‑1 (MQ=255) | TTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAG > NC_000913/1824914‑1825207 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |