| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 44.8% | 142.3 / 35.3 | 87 | V288G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (2/46); new base G (39/0); total (41/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.85e-23 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCT > NC_000913/599426‑599726 | aaaCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggt < 2:223111/151‑1 (MQ=255) taCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGACCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGCGggtg > 1:972026/2‑151 (MQ=255) aaCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggtg < 1:632192/151‑1 (MQ=255) aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggtgg < 1:1180465/151‑1 (MQ=255) cGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGggggggg > 1:667640/1‑150 (MQ=255) tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGgggggggggggggt > 1:1016023/1‑147 (MQ=255) gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGggggggggggcc > 2:762390/1‑145 (MQ=255) gacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATcc > 1:68247/1‑148 (MQ=255) gacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGc < 1:388864/151‑1 (MQ=255) gacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGc < 2:546422/151‑1 (MQ=255) gacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTg > 1:685583/1‑150 (MQ=255) aTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCgg < 1:680094/151‑1 (MQ=255) cacaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCa < 2:1354956/151‑1 (MQ=255) cacaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCGCGCT‑cc > 2:1292395/1‑147 (MQ=255) cGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTTCGAG‑CCGGCgaaaa > 2:568749/1‑150 (MQ=255) tttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGc < 1:847999/150‑1 (MQ=255) tAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTTCGGTCCCGGCaaaa > 2:488952/1‑145 (MQ=255) aaaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGAT‑CCGGGAAAAAAGccc > 1:934465/1‑149 (MQ=255) aaaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCCAGAT‑CCCGCaaaa > 2:692731/1‑143 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGT‑CCGGCAAAAAAGCCCgcg > 2:779405/1‑147 (MQ=255) gCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAg < 2:321278/151‑1 (MQ=255) ccAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTACCGGCAT‑CCCGCAAAAAAGccc > 2:971581/1‑144 (MQ=255) cAGTGAAAATGGCGTGCGCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCGCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGt < 2:206274/150‑1 (MQ=255) cAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCGGG‑CCCGGCAAAACAACCGCGAAGTg > 2:760912/1‑151 (MQ=255) gTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGAt < 1:896591/151‑1 (MQ=255) gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATc < 2:66047/150‑1 (MQ=255) gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATc < 1:229207/150‑1 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGT‑CCGGCAAAAACGCCCGGGAAGGGAAcg > 1:1096413/1‑150 (MQ=255) ggCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCgccgcc < 1:829495/150‑1 (MQ=255) gCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCTGCGGT‑CCGGCCAAAAAGCCCGAGGAGGGATCgccgcc > 2:1069805/1‑149 (MQ=255) cGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGAT‑CCGGCAAAAAAGCCCGAGAAGGGATCgccgcc > 2:1466685/1‑148 (MQ=255) cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCGCC‑GTGAAgg > 2:716912/1‑151 (MQ=255) cGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGAc < 2:93262/151‑1 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACaa < 1:158984/150‑1 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACaa < 1:1423670/150‑1 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCCCC‑GGGAAGGGCaa > 2:1136918/1‑150 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTCCTGCGGT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCGCC‑GGGAAgggaaaa > 2:667084/1‑144 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGACTGCGAT‑CCGGCAAAAACGCCCGAGAAGGGATAGCCGCC‑GTGAAGGACaaa > 2:202110/1‑149 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATTCTGGGAT‑CCCGCAAAAACGCCCGAGAAGGGAGCGCCGCC‑CTGAAGGGCaaa > 2:29173/1‑149 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGTCGCC‑GTGAAGGACAAACTgg < 1:1273265/149‑1 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGaa < 2:264008/151‑1 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGa < 1:1180106/150‑1 (MQ=255) cgcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCGCC‑GTGAAGGACAAACTGGaa > 1:1311289/1‑150 (MQ=255) gcgATGTTGCGAAGGTCAAGATTGGCCGGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGGGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAAAGCCCGAGAAGTGATCGCAGCC‑GTGAAGGACAAACTGGaa < 1:365961/149‑1 (MQ=255) gATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAAc < 1:541855/149‑1 (MQ=255) gATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACg < 2:703712/150‑1 (MQ=255) gATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGAG‑CCGGCAAAAACGCCCGGGAAGGGATCGCCGCC‑CGGCAGGGCAAAATGGaaa > 2:263064/1‑148 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCt < 1:1295419/151‑1 (MQ=255) tGTTGCGAAGGTCCAGATTGGCCCGGAGATGAGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGAGGGGGGGGGGGACCGGCCT‑CCGGGCAAAACGACCACGAAGGGATGGCCCCC‑GCGAAGGAc > 1:60118/1‑136 (MQ=255) gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTg < 2:354677/150‑1 (MQ=255) tGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGaa < 2:847653/150‑1 (MQ=255) cGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGAT‑CCGGCCAAAAAGCCCGAGAAGGGATCGCCGCC‑GGGAAGGACAAACTGGAAACGCCGaaaa > 2:121105/1‑150 (MQ=255) cGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAAACCCCGGGAAGGGAGCGCCGCC‑GGGAAGGGCAAACTGGAAACGCCGaaaa > 1:1405350/1‑150 (MQ=255) aaGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCCGCGAA‑CCGGCAAAAAAGCCCGAGAAGTGATCGCCGCC‑GCGGAGGGCAAACTGGAAACCCTGaaaa > 2:1013379/1‑148 (MQ=255) aGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAagtag < 2:751080/151‑1 (MQ=255) gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCGCC‑GGGAAGGACAAACTGGAAAAGCTGAAAAGAAGTCTGcc > 1:997488/1‑150 (MQ=255) ggCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGAT‑CCGGCAAAAAAGCCCGAGAAGGGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCgg > 1:1323727/1‑148 (MQ=255) cgggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAgg < 2:139984/147‑1 (MQ=255) cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCg < 1:1264067/150‑1 (MQ=255) ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCTTCGGT‑CCCGCAAAAACGCCCCGGAAGGGGTCGGCGCCGGTGAAGG‑CAAAATGGGAAAGCTGAAAAAGATTCTGGCGGGAgg > 2:402782/1‑147 (MQ=255) ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGT‑CCGGCAAAAAAGCCCGAGAAGGGATCGCCGCC‑CGGGAGGAAAAACAGGAAAAGCTGAAAAAAAGGCTGCCGGAAgggggg > 2:905282/1‑147 (MQ=255) gcgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGAt < 1:1015360/150‑1 (MQ=255) cgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAg < 1:762468/151‑1 (MQ=255) cgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGAT‑CCGGCAAAAACGCCCCAGAAGGGATCGCCGCC‑CTGAAGGACAAAATGGAAACGGTGAAAAGGAGTCTGCCGGGAGGCgggggg > 2:365755/1‑145 (MQ=255) cgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATGCCGGGAT‑CCGGGAAAAACGCCCGAGAAGGGGGAGGCGCC‑GGGAAGGAACAAATGGGAACGCTGAAAAAGAGTCTGCCGGGAGGCgggggg > 2:926878/1‑145 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAg < 2:1015927/150‑1 (MQ=255) ggggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTTCGAT‑TCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGAAAAACTGGAAAAGCTGAAAAGGAGTCTGCCGGGAGGGGGGGAGATAGtt > 1:1057271/1‑149 (MQ=255) gggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCGCGAT‑CTGGCAAAAACGCCCGCGAAGTGAGCGCCCCC‑GGGAAGGACAAACCGGAAACGCCGGAAAGTAGTCTGCCGGCAGGCGTGGAGATAGtt > 1:156586/1‑148 (MQ=255) ggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTacaa < 2:760013/151‑1 (MQ=255) ggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAAATGGAAACGCTGAAAAGTAGTCTGCCGGGAGGCGTGGGGATAGTTaca > 2:926369/1‑150 (MQ=255) cATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAAAGCCCGAGAAGGGAGCGCCGCC‑GGGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGGAGGCGGGGGGATAGTTacaa > 2:1286026/1‑149 (MQ=255) ttGCCGAACTAAGCGGCGAAGGCGAAGGGGCGGGCGGGGTGGGTACTCTGCTAT‑CCGGAAAAAACGCCCGAGAAGGGATCGCAGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTaca < 2:299020/146‑1 (MQ=255) tGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGTGGGGGTCCTCCGAT‑CCCGCACAAACACCCGGGAAGCGATTGGCGCC‑CCGAAGGAGAAACCAGAAACGCCGGAAAATAATCTGCCGGAAGGCGCGGAGATaagtttcaaaaa > 1:125224/1‑139 (MQ=255) tGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATa < 2:561921/150‑1 (MQ=255) tGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATa < 2:667568/150‑1 (MQ=255) tGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTTCGAT‑CCGGCAAAAACGCCCGAGAAGAGAGCGCCGCC‑GTGAAGGACAAAATGGGAAAGCTGGAAAGAAGTCTGCCGGGAGGGGGGGGGAGAGTTAAAACATa > 2:1065438/1‑150 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATAct < 1:619790/151‑2 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATAc < 1:251385/150‑1 (MQ=255) ccGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACg < 1:433311/150‑1 (MQ=255) ccGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCCGCGAT‑CCCGCAAAAACGCCCGAGAAGGGATCGCCGCC‑GTGGAGGACAAACTGGAAACGCTGAAAAGGAGTCTGCCGGGAGGCGTGGGGATAGTTTCAACATACg > 1:579494/1‑150 (MQ=255) cGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGAt < 1:1456538/151‑1 (MQ=255) gAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGGCAAACTGGAAACGCTGAAAAGTAGTCTGCCGGGAGGCGGGGGGGTAGTTACAACATACGATc > 1:1392588/1‑151 (MQ=255) aaCTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCg < 2:1405242/151‑1 (MQ=255) cTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGAGCCTGCGAA‑TCGGCAAAAACGCCCGGGAAGGGATCGCCGCC‑GGGAAAGACAAAATGGAAAAGCTGAAAAGTAGACTGCCGGGAGGGGGGGAGATAGTTacaacaaaaga > 2:601965/1‑141 (MQ=255) aCGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcc > 1:1043688/1‑150 (MQ=255) ggcgaaggcgaaTTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagccagc < 2:971931/151‑1 (MQ=255) gaaggcgaagTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTc < 1:476964/150‑1 (MQ=255) ggcgaagTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTg < 1:475410/151‑1 (MQ=255) gaagTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAcc < 2:934376/151‑1 (MQ=255) gTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACcgcg < 2:68326/151‑1 (MQ=255) cgggcgggGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCAt > 2:1187402/1‑151 (MQ=255) gcgggGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGa < 1:1105632/151‑1 (MQ=255) gggTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACaa < 1:1146702/151‑1 (MQ=255) gggTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACaa < 2:685507/151‑1 (MQ=255) tggtgATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCt > 1:1260156/1‑151 (MQ=255) | AAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCC‑GTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCT > NC_000913/599426‑599726 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |