BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,575,814	A→G	pseudogene (1896/2937 nt)	yjiV →	pseudogene; conserved hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,575,814	0	A	G	100.0%	399.7 / NA	105	pseudogene (1896/2937 nt)	yjiV	pseudogene; conserved hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (60/45); total (60/45)

Only 100 of 105 total aligned reads displayed.

AATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGC  >  NC_000913/4575671‑4575959

aaTAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGa                                                                                                                                              >  1:402674/1‑149 (MQ=255)

aaTAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGa                                                                                                                                              >  2:1075711/1‑149 (MQ=255)

     aaTCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTAc                                                                                                                                       >  1:1052777/1‑151 (MQ=255)

     aaTCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTAc                                                                                                                                       >  1:339149/1‑151 (MQ=255)

     aaTCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTAc                                                                                                                                       <  2:1000390/151‑1 (MQ=255)

     aaTCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTAc                                                                                                                                       >  1:1194292/1‑151 (MQ=255)

     aaTCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTAc                                                                                                                                       <  2:1278106/151‑1 (MQ=255)

      aTCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACg                                                                                                                                      >  2:438187/1‑151 (MQ=255)

       tCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGc                                                                                                                                     >  2:942518/1‑151 (MQ=255)

         cTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGc                                                                                                                                     >  1:1298177/1‑149 (MQ=255)

           ggATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCagag                                                                                                                                 <  1:1090297/151‑1 (MQ=255)

           ggATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCaga                                                                                                                                  <  2:1099323/150‑1 (MQ=255)

               aCGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTc                                                                                                                             >  2:1223458/1‑151 (MQ=255)

                cGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCt                                                                                                                            >  2:298785/1‑151 (MQ=255)

                 ggCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTg                                                                                                                           <  2:1347345/151‑1 (MQ=255)

                   cTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGc                                                                                                                         >  1:1193922/1‑151 (MQ=255)

                    ttttAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGc                                                                                                                         >  1:1151734/1‑150 (MQ=255)

                        aaaGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCaaaa                                                                                                                     <  1:393985/150‑1 (MQ=255)

                        aaaGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCaaa                                                                                                                      >  1:1331148/1‑149 (MQ=255)

                        aaaGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCaaa                                                                                                                      >  1:756240/1‑149 (MQ=255)

                        aaaGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCaaa                                                                                                                      >  2:658077/1‑149 (MQ=255)

                           ggCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCAc                                                                                                                 <  2:1182697/151‑1 (MQ=255)

                           ggCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCAc                                                                                                                 >  1:436846/1‑151 (MQ=255)

                             cTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCAcgc                                                                                                               >  1:258265/1‑151 (MQ=255)

                                aaCCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCCGAGGGTCTGGCAAAAGCAcgcg                                                                                                              <  2:1032850/149‑1 (MQ=255)

                                aaCCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGa                                                                                                             <  1:1060890/150‑1 (MQ=255)

                                 aCCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACt                                                                                                           >  2:792730/1‑151 (MQ=255)

                                      ttATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTc                                                                                                      >  1:326411/1‑151 (MQ=255)

                                       tATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTc                                                                                                      >  1:560040/1‑150 (MQ=255)

                                           tGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGcc                                                                                                  >  2:1258320/1‑150 (MQ=255)

                                             ccTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATg                                                                                               <  1:752903/151‑1 (MQ=255)

                                                aCCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGa                                                                                              <  1:691689/149‑1 (MQ=255)

                                                 cccATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATcc                                                                                           <  2:683794/151‑1 (MQ=255)

                                                  ccATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCATAAGCACGCGACTGGGTCAGCCATGAt                                                                                             <  2:1213152/148‑1 (MQ=255)

                                                  ccATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCg                                                                                          <  2:634016/151‑1 (MQ=255)

                                                      atTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTg                                                                                       <  1:1259905/150‑1 (MQ=255)

                                                        ttcgttcgAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATc                                                                                    >  1:20250/1‑151 (MQ=255)

                                                          cgttcgAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCg                                                                                   <  2:1449092/150‑1 (MQ=255)

                                                          cgttcgAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCg                                                                                   <  2:174/150‑1 (MQ=255)

                                                          cgttcgAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGc                                                                                  >  1:1161981/1‑151 (MQ=255)

                                                             tcgAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGcac                                                                                <  2:1319332/150‑1 (MQ=255)

                                                             tcgAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGcac                                                                                <  2:581768/150‑1 (MQ=255)

                                                                       tACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTc                                                                      <  2:194662/150‑1 (MQ=255)

                                                                        aCCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCgg                                                                    >  2:188582/1‑151 (MQ=255)

                                                                        aCCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCgg                                                                    <  1:942607/151‑1 (MQ=255)

                                                                          ccTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGTATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGaa                                                                  <  2:1052116/151‑1 (MQ=255)

                                                                           cTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGaa                                                                  >  2:569026/1‑150 (MQ=255)

                                                                            tGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTTGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGaaa                                                                 >  1:985727/1‑150 (MQ=255)

                                                                              gcgcAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACg                                                              >  2:416706/1‑151 (MQ=255)

                                                                              gcgcAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACg                                                              >  1:227665/1‑151 (MQ=255)

                                                                                gcAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTc                                                            >  1:1010237/1‑151 (MQ=255)

                                                                                 cAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCt                                                           <  1:937882/151‑1 (MQ=255)

                                                                                  aaTATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGGCTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTg                                                          <  1:907731/151‑1 (MQ=255)

                                                                                  aaTATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTg                                                          <  1:1453576/151‑1 (MQ=255)

                                                                                   atatGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTgg                                                         >  1:522333/1‑151 (MQ=255)

                                                                                    tatGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTgg                                                         >  1:21877/1‑150 (MQ=255)

                                                                                     atGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGgac                                                       <  1:769248/151‑1 (MQ=255)

                                                                                     atGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGga                                                        <  2:211481/150‑1 (MQ=255)

                                                                                      tGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGgac                                                       >  2:777052/1‑150 (MQ=255)

                                                                                       gACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGgac                                                       >  2:1265162/1‑149 (MQ=255)

                                                                                            ttttGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACAtt                                                >  1:1020542/1‑151 (MQ=255)

                                                                                             tttGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACAtt                                                <  2:68427/150‑1 (MQ=255)

                                                                                               tGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTGCGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAAc                                             >  2:1136969/1‑151 (MQ=255)

                                                                                               tGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAAc                                             >  1:1215756/1‑151 (MQ=255)

                                                                                                gTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAAc                                             <  2:1052682/150‑1 (MQ=255)

                                                                                                gTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACg                                            <  1:903811/151‑1 (MQ=255)

                                                                                                  cgcgCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGa                                           <  1:1058132/150‑1 (MQ=255)

                                                                                                   gcgcAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtc                                         <  2:761782/151‑1 (MQ=255)

                                                                                                   gcgcAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtc                                         >  2:975364/1‑151 (MQ=255)

                                                                                                      cAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtg                                      >  2:353239/1‑151 (MQ=255)

                                                                                                       aGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgt                                     >  1:216158/1‑151 (MQ=255)

                                                                                                         aaaGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtcg                                   >  2:822495/1‑151 (MQ=255)

                                                                                                         aaaGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtcg                                   <  1:198002/151‑1 (MQ=255)

                                                                                                          aaGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtcgt                                  >  1:637131/1‑151 (MQ=255)

                                                                                                            gTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTgg                                >  1:701396/1‑151 (MQ=255)

                                                                                                            gTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTgg                                <  2:609913/151‑1 (MQ=255)

                                                                                                            gTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTgg                                <  2:514149/151‑1 (MQ=255)

                                                                                                              cacaATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGa                               <  2:275619/150‑1 (MQ=255)

                                                                                                               acaATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGa                               >  2:1385384/1‑149 (MQ=255)

                                                                                                               acaATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGa                               >  1:237701/1‑149 (MQ=255)

                                                                                                                caATGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAgg                            <  2:1298072/151‑1 (MQ=255)

                                                                                                                 aaTGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAggc                           >  2:470007/1‑151 (MQ=255)

                                                                                                                  aTGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAggcg                          >  2:1213547/1‑151 (MQ=255)

                                                                                                                   tGCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAggcg                          >  1:896418/1‑150 (MQ=255)

                                                                                                                    gCCGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAggcgg                         <  1:1240732/150‑1 (MQ=255)

                                                                                                                     ccGGAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCt                       >  2:1101194/1‑151 (MQ=255)

                                                                                                                        gAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTct                    >  1:594405/1‑151 (MQ=255)

                                                                                                                        gAAATCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTct                    <  1:1075812/151‑1 (MQ=255)

                                                                                                                           aTCTGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTctact                 >  1:104521/1‑151 (MQ=255)

                                                                                                                              tGGAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATc              >  2:777781/1‑151 (MQ=255)

                                                                                                                               ggAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTAt               <  2:709389/149‑1 (MQ=255)

                                                                                                                               ggAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATc              <  2:703581/150‑1 (MQ=255)

                                                                                                                                gAAGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGt            <  2:1420604/151‑1 (MQ=255)

                                                                                                                                 aaGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTa           <  1:928201/151‑1 (MQ=255)

                                                                                                                                  aGCTGGATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTAc          >  1:934334/1‑151 (MQ=255)

                                                                                                                                       gATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCg     <  2:1266049/151‑1 (MQ=255)

                                                                                                                                       gATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCg     >  2:839343/1‑151 (MQ=255)

                                                                                                                                       gATCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCg     >  1:355164/1‑151 (MQ=255)

                                                                                                                                        aTCGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCg     >  2:854354/1‑150 (MQ=255)

                                                                                                                                          cGTTCGCAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGc  >  2:487663/1‑151 (MQ=255)

AATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGC  >  NC_000913/4575671‑4575959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`