Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,907,439	0	T	C	56.0%	15.5 / 117.0	84	D47G (GAC→GGC)	phoU	negative regulator of PhoR/PhoB two‑component regulator
Reads supporting (aligned to +/- strand):  ref base T (16/21);  new base C (16/31);  total (32/52)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.23e-02

ATGGTTTTACTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTC  >  NC_000913/3907292‑3907587                                                                                                                                                    |                                                                                                                                                     aTGGTTTTACTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCt                                                                                                                                                   <  2:1018708/151‑1 (MQ=255)   ggTTTTACTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTgg                                                                                                                                                 <  2:368805/151‑1 (MQ=255)   ggTTTTACTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTg                                                                                                                                                  <  2:5061/150‑1 (MQ=255)    gTTTTACTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCt                                                                                                                                                   <  1:214157/148‑1 (MQ=255)       ttACTTATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTTACGTTTGGCGATAATGCGCTCGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTa                                                                                                                                              <  1:781204/150‑1 (MQ=255)       ttACTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTa                                                                                                                                              <  1:141079/150‑1 (MQ=255)        tACTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTAt                                                                                                                                             <  2:95169/150‑1 (MQ=255)          cTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGc                                                                                                                                           <  2:600543/150‑1 (MQ=255)            gATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATc                                                                                                                                        <  2:1093817/151‑1 (MQ=255)            gATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATc                                                                                                                                        <  2:1145999/151‑1 (MQ=255)            gATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATc                                                                                                                                        <  1:1065818/151‑1 (MQ=255)            gATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATc                                                                                                                                        >  1:1277813/1‑151 (MQ=255)                   aTAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTg                                                                                                                                  >  1:432790/1‑150 (MQ=255)                    tAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGAt                                                                                                                                >  2:854421/1‑151 (MQ=255)                     aaCCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAGTGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGAtt                                                                                                                               >  2:198726/1‑151 (MQ=255)                        cAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCa                                                                                                                            <  1:940827/151‑1 (MQ=255)                         aGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCAt                                                                                                                           <  2:34046/151‑1 (MQ=255)                          gTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATc                                                                                                                          <  2:1081031/151‑1 (MQ=255)                             gCAGGTCGCTCGCGGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGCTCTTGTTGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATc                                                                                                                          >  1:693269/1‑148 (MQ=255)                             gCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGa                                                                                                                       <  1:1078549/151‑1 (MQ=255)                              cAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGaa                                                                                                                      <  1:266758/151‑1 (MQ=255)                              cAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCCCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTTTCCTGGTTATGCATCGCGGTGATTGCATCAGa                                                                                                                       >  1:546928/1‑150 (MQ=255)                                 gTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAgc                                                                                                                   <  2:595437/151‑1 (MQ=255)                                    gctcgcCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAgctgc                                                                                                                <  1:1134122/151‑1 (MQ=255)                                       cgcCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAgctgctgc                                                                                                             >  2:130977/1‑151 (MQ=255)                                       cgcCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAgctgct                                                                                                               <  2:832532/149‑1 (MQ=255)                                        gcCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAgctgctgct                                                                                                            >  2:1205014/1‑151 (MQ=255)                                        gcCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAgctgctgct                                                                                                            >  2:867860/1‑151 (MQ=255)                                         ccGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTc                                                                                                           <  1:1125410/151‑1 (MQ=255)                                              ggCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTccacca                                                                                                      <  2:428078/151‑1 (MQ=255)                                               gCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCAt                                                                                                     <  1:1092529/151‑1 (MQ=255)                                                cTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATg                                                                                                    >  2:794990/1‑151 (MQ=255)                                                   aCGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATgccg                                                                                                 <  2:212592/151‑1 (MQ=255)                                                   aCGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATgccg                                                                                                 <  1:173835/151‑1 (MQ=255)                                                         ggCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCAt                                                                                            <  1:713343/150‑1 (MQ=255)                                                         ggCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATg                                                                                           <  1:807380/151‑1 (MQ=255)                                                         ggCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATg                                                                                           <  1:312023/151‑1 (MQ=255)                                                           cGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGt                                                                                         <  1:867635/151‑1 (MQ=255)                                                               aaTGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCAACAATGCCGCCCATGGtcatc                                                                                     >  1:874616/1‑151 (MQ=255)                                                                   cgcacgcaGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTTCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCt                                                                                 <  2:693305/151‑1 (MQ=255)                                                                       cgcaGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCtgcg                                                                              <  2:1283559/150‑1 (MQ=255)                                                                        gcaGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCtgcgtg                                                                            >  2:1040127/1‑151 (MQ=255)                                                                         caGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCtgcgtgc                                                                           <  2:106938/151‑1 (MQ=255)                                                                         caGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCtgcgtgc                                                                           <  2:537304/151‑1 (MQ=255)                                                                           ggCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCgg                                                                         >  2:794443/1‑151 (MQ=255)                                                                             cTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGAt                                                                       >  2:504610/1‑151 (MQ=255)                                                                              ttCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCACTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGAt                                                                       >  1:1186785/1‑150 (MQ=255)                                                                               tCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGAt                                                                       <  1:140767/149‑1 (MQ=255)                                                                                cATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACt                                                                    >  1:1071682/1‑151 (MQ=255)                                                                                   cgatcgCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTc                                                                 >  1:201067/1‑151 (MQ=255)                                                                                         ccACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTc                                                           <  1:451483/151‑1 (MQ=255)                                                                                         ccACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTc                                                           <  1:624102/151‑1 (MQ=255)                                                                                              tCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGc                                                        <  1:782433/149‑1 (MQ=255)                                                                                              tCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGt                                                      >  1:559117/1‑151 (MQ=255)                                                                                               ccATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGt                                                      <  1:448522/150‑1 (MQ=255)                                                                                                   catGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAAc                                                 >  1:314971/1‑151 (MQ=255)                                                                                                   catGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAAc                                                 >  1:1103961/1‑151 (MQ=255)                                                                                                    atGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACt                                                >  1:433763/1‑151 (MQ=255)                                                                                                         gACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGcc                                            <  2:1284464/150‑1 (MQ=255)                                                                                                         gACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCg                                           <  2:576112/151‑1 (MQ=255)                                                                                                          aCGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCgg                                          <  2:1142677/151‑1 (MQ=255)                                                                                                          aCGTTCTTGTCGCCTTCGATGACGCGCTTCGCAAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCTTGCCGCCCATGGTCATCACCTGCGTGCGCATATTTTCCAGTTCGGCGTTCATCTgaacg                                           <  1:102706/150‑5 (MQ=255)                                                                                                           cGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCgg                                          >  2:493868/1‑150 (MQ=255)                                                                                                           cGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGa                                         <  1:1127223/151‑1 (MQ=255)                                                                                                            gTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGa                                         >  1:1265434/1‑150 (MQ=255)                                                                                                             ttCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGa                                         >  1:954079/1‑149 (MQ=255)                                                                                                             ttCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGaa                                        >  1:1017019/1‑150 (MQ=255)                                                                                                                     gCCTTCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGttt                                >  1:510006/1‑150 (MQ=255)                                                                                                                        ttCGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTttatt                             >  1:1152684/1‑150 (MQ=255)                                                                                                                         tCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTttatta                            <  2:237424/150‑1 (MQ=255)                                                                                                                          cGATGACGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTTCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTaa                           <  1:5442/150‑1 (MQ=255)                                                                                                                           gATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTttatta                            >  1:1261001/1‑148 (MQ=255)                                                                                                                               aCGCGCTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTga                     <  2:33952/151‑1 (MQ=255)                                                                                                                                cgcgCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGTATCAGAAAGCTGCTGCTCCACCTTGCCTTCCATGGTCATCACCTGCGTTCGTATACTTTCAAGTTCGTCCTTTAACTGGCCGGAAATATGTTTATTaat                          <  1:738086/145‑2 (MQ=255)                                                                                                                                 gcgcTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTg                      >  1:925125/1‑148 (MQ=255)                                                                                                                                   gcTTCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCACCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACt                 <  1:1263504/151‑1 (MQ=255)                                                                                                                                      tCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTg                <  1:888977/149‑1 (MQ=255)                                                                                                                                      tCGCCAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCTTCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGt               <  2:841021/150‑1 (MQ=255)                                                                                                                                         ccAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCAt           >  2:8621/1‑151 (MQ=255)                                                                                                                                          cAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCAt           >  1:513484/1‑150 (MQ=255)                                                                                                                                          cAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATa          <  2:949307/151‑1 (MQ=255)                                                                                                                                          cAGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATa          <  2:701900/151‑1 (MQ=255)                                                                                                                                           aGATCGCTGCCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATa          <  2:1179033/150‑1 (MQ=255)                                                                                                                                                  tGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTc  >  2:587770/1‑151 (MQ=255)                                                                                                                                                    |                                                                                                                                                     ATGGTTTTACTGATCACCATAACCAGTCGCAGGTCGCTCGCCGTCGGCTGACGTTTGGCGATAATGCGCACGCAGGCTTCATCGATCGCCACTTCCATCATGTTGACGTTCTTGTCGCCTTCGATGACGCGCTTCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTC  >  NC_000913/3907292‑3907587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑