| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,604,344 | 0 | C | T | 42.2% | 67.6 / 41.2 | 71 | S62F (TCT→TTT) | bglJ | bgl operon transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base C (6/35); new base T (30/0); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGG > NC_000913/4604196‑4604494 | cTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTtttttttt > 2:1193597/1‑151 (MQ=255) tCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCTGttttttttt > 2:1257898/1‑151 (MQ=255) cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTtttttttttt > 1:678175/1‑151 (MQ=255) cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttctt < 1:752595/149‑1 (MQ=255) aTAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttcttttt < 2:588817/151‑1 (MQ=255) aGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAtttttttttttttt > 1:437664/1‑149 (MQ=255) aGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAtttttttttttttt > 2:781745/1‑149 (MQ=255) aaaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCTtttttttttttttt > 1:143658/1‑146 (MQ=255) aaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTTcc > 1:1161927/1‑150 (MQ=255) aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCTtttttttttttttttcctt > 2:499866/1‑143 (MQ=255) aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATg < 2:683475/151‑1 (MQ=255) gTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGaa < 2:963453/151‑1 (MQ=255) cATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGaa > 1:295906/1‑149 (MQ=255) aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCGtttttttttttttcggc > 1:1285414/1‑136 (MQ=255) gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGa < 2:1103494/150‑1 (MQ=255) agtagtATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACACTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATgaggag > 1:943486/1‑146 (MQ=255) agtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCAGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCCTTTTTTTTTTTTTTCTCCTTAGAAGTg > 1:1143296/1‑145 (MQ=255) taTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGGGAGCGCag > 2:226392/1‑150 (MQ=255) aTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCTTTTTTTCTTTTTTTGCCATGTCAAGAGGgcgc > 1:1094081/1‑147 (MQ=255) cGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagagag < 2:195199/151‑1 (MQ=255) ggTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGGGCGCAGAGAgg > 1:152267/1‑151 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGAt < 2:103474/151‑1 (MQ=255) agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATc < 2:712689/151‑1 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCt < 2:1015967/151‑1 (MQ=255) agTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCtt < 2:1296375/151‑1 (MQ=255) agTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCtt < 2:27770/151‑1 (MQ=255) aTTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGGGAAGGGGGTGGCGGGAGGGGGTATCTTGcc > 2:806269/1‑149 (MQ=255) tCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAATTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAggggattttttttctta > 1:423977/1‑136 (MQ=255) cAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCctgac‑t < 2:633995/151‑1 (MQ=255) tGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTTCCCTGTGGAGTGAGCGCCGGGAGGGATTATCTTTCCTGAC‑TGGACt > 1:692801/1‑147 (MQ=255) gggTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGGGAGGGCAGAGAGGGGTTATCTTGCCTGAC‑TGAACTGGC‑GAtt > 2:1253412/1‑151 (MQ=255) ccgtataAGCTCCATACCTATACCGGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCTGTCATTTTTTCTTTTTCTGCCATGATAAGTGAGCGCAGATAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTc < 1:1252471/148‑1 (MQ=255) ccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAGGGGTTTTCTTGCCTGAC‑TGAACTGGC‑GATTAAGttt > 2:561498/1‑150 (MQ=255) tataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCAGAGGGGGGTTATTTTGCCTGAC‑TGAAATGGC‑GGTTAAGTTTcc > 2:202880/1‑149 (MQ=255) tataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCcg < 1:658561/150‑1 (MQ=255) ataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCcgc < 2:346635/150‑1 (MQ=255) ataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTTTTTTTCTTCCACGAGAAGTGAGCGCAGGGAGGGGTTATCTTGCCTGAC‑TGAACTGGC‑GATTAAATTTTcgcg > 1:743833/1‑151 (MQ=255) ataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGACATTTTTTTTTTTTTTGCCCTGGGAGGTGAGGGCAGGGGGGGGGTTTGTTGCCCGGC‑TGAACTTGG‑GATTAAGgtttc > 2:530081/1‑146 (MQ=255) taAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTTCCTGAC‑TTAACTGGC‑GATTAAGATTCCGCGt > 2:1052624/1‑151 (MQ=255) aaGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTa < 1:403123/151‑1 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCCATTTTTCTTTTTCTGCCATTAGAAGAGTGGGCAAAGGGGGGTTATCTTTCCTGACTTAAATTGGG‑GGTTAATTTTCcgctacc > 2:1152520/1‑146 (MQ=255) ccATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCgg < 2:1164370/151‑1 (MQ=255) cATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGc < 2:1179413/151‑1 (MQ=255) aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGATTATTTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTTCGCGTACCCGGCg > 2:764225/1‑149 (MQ=255) ccTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTCAGAAGCGAGCGCAGAGGGGGATTATGTTGCCTGCC‑CGTAATGGG‑GAATAAAGTTTCTCGTGCCCgg > 2:769795/1‑146 (MQ=255) ccTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGtt < 1:777730/150‑1 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGGGAGGGCAGAGAGGGATTTTTTTTCCTGAC‑TGTACTTGC‑GATTAAGTTTTCGCGTACCCGGCGGTTTGt > 2:797305/1‑151 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTa < 1:465704/149‑1 (MQ=255) taCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCCTGAGAAGAGGGCGCAGGGAGGGGTTATCTTGCCCGAC‑TGAACTGGC‑GACTAAATTTCCGCGTACCCCGCGTTTAGtt > 1:933362/1‑151 (MQ=255) aCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAAGGAGGGCCGGGGGGGAGTATCTTGCCTGAC‑TGAAATGGC‑GATTAAGCTTCCCCGTTCCCGGCGGTTAGtt > 2:1216779/1‑150 (MQ=255) ccAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTAt < 1:202876/151‑1 (MQ=255) cAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTCTTTTTTTGCCCTTGGAAGGGGGTGGCGGGGGGGGTTGTCTTGTCTTGC‑TGCACTGGCGGGTTAAATTT‑CTCGTACCCAGCGtttttttttt > 2:501942/1‑144 (MQ=255) tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTTCGCGTACCCGGCGGTTTGTTAtt > 2:370856/1‑148 (MQ=255) cAGGATTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCgg < 1:923545/151‑1 (MQ=255) cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAAGGAGCGCACCGGGGGATTTTATTTTCTGAT‑TGGACCGGC‑GATTAAGATTTCGCCGACCCCGCGTTTAGGTATTGCgg > 1:377858/1‑151 (MQ=255) cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCCTGGGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGAC‑TGAACTGGC‑GATTAAGTTTTCGCGTACCCCGCGTTTAGTTATTGCgg > 2:1168737/1‑151 (MQ=255) ggAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTTCCCTGAGAAGTGAGCGCAGAGAGGGATTATCTTTCCTGAC‑TGAACTGGC‑GATTAAGTTTTCGCGTACCCCGCGGTTAGTTATTGTgg > 2:605357/1‑149 (MQ=255) ggAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgat < 2:829381/151‑1 (MQ=255) aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGACCTTTTTTTTTTTTTTTCCCTGGGAAGGGAGAGCAGAGGGGGGATATTTTTCCTGAC‑TTGACTTGC‑GGTTAAGTTTTCGCGTTGCCCGGGTTTTGTTTTTGCgg > 1:1108211/1‑143 (MQ=255) cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGGGAAGGGAGCGCAGAGAGGGGTTTTCTTGCCTGAC‑TGAACTGGC‑GAATAAATTTCCGCGTACCCGGCGGTTAGTTATTGCGGATGAAGATAtt > 2:5640/1‑150 (MQ=255) cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATAtt < 1:297809/150‑1 (MQ=255) cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTg < 2:321786/151‑1 (MQ=255) aGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCTTTTAGTTATTGCGGATGATGATATTGa < 2:332535/151‑1 (MQ=255) aGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGa < 2:530186/151‑1 (MQ=255) ggATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTTCCATGGGAAGTGAGCGCAGAGAGGGGTTATCTTGCCTGAC‑TGAACTGGC‑GGTTAAGGTTTCGCGTACCCCGCGTTTTGTTTTTGCGGGTGATGATAtt > 1:889917/1‑148 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGCGGTTATTTTTTTTTTTTCTGCCCAGAGGAGTGAGGGCGGAGAGGGGTTATTTTTCCTCAC‑TGAAACGGG‑GTTTAAGTTTTCGCGGCCCCCGCGCTTTGTTATTGCGGGTGAAGATATTTAAg > 2:78359/1‑150 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGc < 2:1292842/151‑1 (MQ=255) ccATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCg < 1:13409/151‑1 (MQ=255) cATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATTTTTCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTTTTTCGGATGATGATATTGAAGCTCgg > 2:265416/1‑151 (MQ=255) aTGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGc < 2:1143331/151‑1 (MQ=255) gcgGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGAtt < 2:266389/151‑1 (MQ=255) ggATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTgg < 1:1011286/151‑1 (MQ=255) ggATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTgg < 2:386714/151‑1 (MQ=255) aTCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGAGAGGGCAGAGAGGGGTTATTTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTTCGCGTACCCGGCGTTTAGTTATTGAGGATGATGATATTTGAACTCGGCCGATTgggt > 2:985985/1‑149 (MQ=255) cGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGGTTATTTTGCCTGAC‑TGAACTGGC‑GGTTAAGTTTTCGCGTACCCGGCGTTTAGTTATTGCGGGTGATGATATTTAAGCTCGGCTGATTGGTTTAtt > 2:4396/1‑151 (MQ=255) cGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGtt < 1:1285322/147‑1 (MQ=255) gTTTGCGGCGGTCCTTTTTTCTTTTTCTTCCCTGAGAAGTGAGCGCAGAGGGGGATTATTTTTCCTGAC‑TGTAATTGC‑GATTTAGTTTCCGCGTACCCGGCGTTTTGTTATTGCGGGTGATGATATTGAAACTCGGCTGGTTTGTTCAtt > 1:253495/1‑150 (MQ=255) tGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTc < 2:1014666/150‑1 (MQ=255) gcggTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt > 1:33041/1‑151 (MQ=255) cggTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATc < 2:316904/151‑1 (MQ=255) ggTCATTTTTGCTTTTTCTGACATGAGGAGTGATCGCAGAGAGGGACTATCTGGCCTGAC‑TGAACTGTG‑GAGTAAGTTTCCGCGTGCCCGGCGTTTAGTTAATGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCTTTGTCGCCATCa < 1:249020/151‑1 (MQ=255) tttttctttttcTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCt < 1:428572/150‑1 (MQ=255) tttttctttttcTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCt < 2:147007/150‑1 (MQ=255) tttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTgg > 1:148489/1‑150 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGa > 1:437795/1‑150 (MQ=255) ctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACgg > 2:767822/1‑151 (MQ=255) | CTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAC‑TGAACTGGC‑GATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGG > NC_000913/4604196‑4604494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |