Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,863,313 T→C A181A (GCT→GCC gapA → glyceraldehyde‑3‑phosphate dehydrogenase A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,863,3130TC100.0% 213.6 / NA 57A181A (GCT→GCCgapAglyceraldehyde‑3‑phosphate dehydrogenase A
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (32/25);  total (32/25)

CGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTAT  >  NC_000913/1863169‑1863456
                                                                                                                                                 |                                                                                                                                               
cgcTAATTCCGAAAAATATGCTGGCAGGGACATCGTTCCCACCGCTTCCTCCCCCCCCACCTGCCGGGCCCCGCTGGCTAAAGTTATCAACGATAACTTCGCCATCATGGAGGGTCTGATGACCCCCGTTCCCGCTACTACCGCCACTCa                                                                                                                                            <  1:989817/150‑1 (MQ=255)
  caaccTTCGAAAAATATGTTGGCCAGGACATCGTTTCAAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAATTTATAAACGATAATTTCGGCATCATCGAAGGTCGGATGCCCCCCTTTCACGCTACTACCGCCACTCAGa                                                                                                                                          <  1:972611/146‑1 (MQ=255)
            cAAATATGCTAGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGAt                                                                                                                               >  1:231741/1‑151 (MQ=255)
             aaaTATGCTGGCCAGGACATCGTTTCCAACGCTCCCTGCCCCACCAACTGCCGGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGAt                                                                                                                               <  2:742746/150‑1 (MQ=255)
             aaaTATGATGGCCAGGAAATCGTTTCCAACGATTCCTGCACCACCAACTGCCTGGATCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGACGGACTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATg                                                                                                                              >  1:562358/1‑151 (MQ=255)
              aaTATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATgg                                                                                                                             <  2:428243/151‑1 (MQ=255)
               atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGc                                                                                                                            >  1:795870/1‑151 (MQ=255)
                  tGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCg                                                                                                                         >  2:599961/1‑151 (MQ=255)
                      ggCCAGGACATCGTTTCCAACGCTTCCTGCACCCCCAACTGCCGGGCTCCTCTGGCTAAAGTTATCAACGATAGCTCCGGCATAATCGAAGGTCTGATGACCCCCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGtct                                                                                                                      <  2:922626/150‑1 (MQ=255)
                      ggCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGtctc                                                                                                                     >  2:7327/1‑151 (MQ=255)
                         cAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTcac                                                                                                                   >  1:621877/1‑150 (MQ=255)
                           ggACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACaa                                                                                                                 >  1:663222/1‑150 (MQ=255)
                              cATCTTTTCCACCGCTTCCTCCACCACCAACGGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTGGGCATCACCGAAGGTCTGATGCCCCCCTTTCACGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGAc                                                                                                             <  2:567538/151‑1 (MQ=255)
                               aTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAACGACt                                                                                                            >  1:55015/1‑151 (MQ=255)
                               aTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACt                                                                                                            >  2:467813/1‑151 (MQ=255)
                                    ttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgcgc                                                                                                       >  2:1117941/1‑151 (MQ=255)
                                      ccAACTCTCCTTGCCCCACCAACTGCCGGGCCCCGCTGCATAAAGTTATCAACGATACCTTCGGCATCATCGAAGTTCTGATGCCCCCCTTCCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgcg                                                                                                        <  1:1230984/148‑1 (MQ=255)
                                        accGCTCCCTGCCCCCCCAACGCCCTGGCCCCGCTGGCTAAATTTATCAACGATAACTGCGGCATAATGGAGGGTCTGATGCCCCCCTTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCgcggcg                                                                                                   <  1:25643/149‑1 (MQ=255)
                                              tctcaccccaccaTCTGCCTGCCTCAGCTGGATAAATTTACCAACGATATCTTGGCCATAATGGAAGGTGTGATAACCACCTTTCACGTTATTTCCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCggcggc                                                                                                 <  1:692892/140‑1 (MQ=255)
                                                cTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcgg                                                                                            >  1:869693/1‑150 (MQ=255)
                                                   caccccCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTCCGGCATCATCGAAGGTCTGATGACCCCCGTTCCCGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcggcg                                                                                          <  2:882750/149‑1 (MQ=255)
                                                     ccaccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTc                                                                                      >  2:728974/1‑151 (MQ=255)
                                                        ccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCCCCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCa                                                                                   <  2:998726/151‑1 (MQ=255)
                                                         caACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTccc                                                                                    >  2:1076792/1‑149 (MQ=255)
                                                         caACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTccc                                                                                    >  2:1220575/1‑149 (MQ=255)
                                                          aaCTGCCGGGCCCCGCTGGCTAAATTTACCAACAATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCa                                                                                   <  2:680445/149‑1 (MQ=255)
                                                                  ggCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACatcatc                                                                         >  2:908625/1‑151 (MQ=255)
                                                                       cGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTc                                                                    >  2:1164269/1‑151 (MQ=255)
                                                                        gaaggaaaaaTTTATCAACGATAATTTGGGCTCAATGGAAGGTCTAATGCCCACCGTTCACGTTACAACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTc                                                                    <  1:374064/143‑1 (MQ=255)
                                                                          tGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCctc                                                                 >  2:224349/1‑151 (MQ=255)
                                                                          tGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCctc                                                                 >  2:246189/1‑151 (MQ=255)
                                                                               aaggTTATCAACGATAACTTCGGCATCATCGAAGTTCTGATGACCCCCGTTCACGCTATTCCCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCg                                                            <  2:464275/148‑1 (MQ=255)
                                                                               aaaTTTAACAACGATAACTTCGGAATCATCGAGGGGCTGATGCCCGCCGTTCACGCTTCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTa                                                               <  1:667610/148‑1 (MQ=255)
                                                                               aaaGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGCCCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCg                                                            <  2:736703/151‑1 (MQ=255)
                                                                                   ttAACAACGATACCTTCGACAATACCTAAGGTCTAATAACCCCGTTACCCGTTATGTCCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGt                                                          <  1:43726/149‑1 (MQ=255)
                                                                                            aTAACTTCGGCATCATCGAAGGCCTGTTGCCCCCCTTTCCCGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTaaa                                                 <  1:1048207/149‑1 (MQ=255)
                                                                                            aTAACTCCGCCCCCATCGAAGTTCTGACCCCCACGGTGCGCCCTACAACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGTGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTTCTGCTAAAGc                                               <  1:649538/151‑1 (MQ=255)
                                                                                                cTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGt                                            >  2:54846/1‑150 (MQ=255)
                                                                                                  tCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAgg                                         >  2:570799/1‑151 (MQ=255)
                                                                                                   cGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGt                                        >  1:1061852/1‑151 (MQ=255)
                                                                                                    ggCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGt                                        >  2:913401/1‑150 (MQ=255)
                                                                                                       ataatcGAAGGTCTGATGACAACGGTTCTCAATTCTCCCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTaaa                                     <  2:672573/147‑1 (MQ=255)
                                                                                                        tcatcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGt                                   >  2:1050830/1‑151 (MQ=255)
                                                                                                        tcatcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGGGCTGCTAAAGCTGTAGGTAAAGt                                   >  1:577574/1‑151 (MQ=255)
                                                                                                         catcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGt                                   >  2:1071336/1‑150 (MQ=255)
                                                                                                          accGAAGGTCTGATGCCCCCCGTTCCCGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAg                                    <  2:395286/146‑1 (MQ=255)
                                                                                                                    tgatcaCCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGCGCTGCTTACGCTGTAGGTAAAGTACTGCCAGAACt                       >  1:615236/1‑151 (MQ=255)
                                                                                                                     gatgaCCACGGTTCCCGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTg                      <  2:476342/151‑1 (MQ=255)
                                                                                                                         accaccGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATg                  >  1:1256942/1‑151 (MQ=255)
                                                                                                                          cccccGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGaa                    <  2:932426/145‑1 (MQ=255)
                                                                                                                            accGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGc                >  2:778950/1‑150 (MQ=255)
                                                                                                                                 tCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAactg          >  1:143421/1‑151 (MQ=255)
                                                                                                                                 tCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAactg          >  2:978993/1‑151 (MQ=255)
                                                                                                                                   cccGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAact           <  1:411260/147‑1 (MQ=255)
                                                                                                                                        tactacCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGt    >  1:201655/1‑151 (MQ=255)
                                                                                                                                          ctacCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTAt  >  2:1159537/1‑151 (MQ=255)
                                                                                                                                          catccGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTgg     <  2:393800/145‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
CGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTAT  >  NC_000913/1863169‑1863456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: