Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,406,631	G→A	A4V (GCA→GTA)	lrhA ←	transcriptional repressor of flagellar, motility and chemotaxis genes

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,406,631	0	G	A	100.0%	325.1 / NA	84	A4V (GCA→GTA)	lrhA	transcriptional repressor of flagellar, motility and chemotaxis genes
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (36/48);  total (36/48)

CGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGC  >  NC_000913/2406485‑2406776                                                                                                                                                   |                                                                                                                                                  tgAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAACTGCGGCAGCAAAAGTGTTCAGATCGGCAACAACAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGGTTTacac                                                                                                                                                >  1:874220/2‑150 (MQ=255) cGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACt                                                                                                                                               <  2:464241/151‑1 (MQ=255)    gttgttCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTAt                                                                                                                                            <  2:816307/151‑1 (MQ=255)            aGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATAtatt                                                                                                                                    <  2:952631/151‑1 (MQ=255)                gCTGCATTTGCTGACTTACGGCGGACTGAGTACAACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCa                                                                                                                                <  2:346485/151‑1 (MQ=255)                gCTGCATTTGCTGACTTACGGCGGACTGAATCCGGCACACAGCGGCAGGCGCGGCAGTCAAAGTGTTCAGATAGGGAACAGCAACAAAAGTTCTCAGCACATCCAGGTCGCGGTTAAATCTCGGTGGATTTACACTTATTATAtattat                                                                                                                                  >  1:494104/1‑149 (MQ=255)                   gCATTTGCTGATTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACtt                                                                                                                             <  2:342065/151‑1 (MQ=255)                   gCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACtt                                                                                                                             >  2:923735/1‑151 (MQ=255)                   gCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACt                                                                                                                              <  1:536617/150‑1 (MQ=255)                    cATTTGCTGACTTCCGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTa                                                                                                                            <  1:513275/151‑1 (MQ=255)                        tGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTg                                                                                                                         <  1:155806/150‑1 (MQ=255)                        tGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTg                                                                                                                         <  2:770259/150‑1 (MQ=255)                        tGCTGACTTACGGCGGACTGAGTACGACACAAAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAAAGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTgg                                                                                                                        >  2:890808/1‑151 (MQ=255)                         gCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTggc                                                                                                                       <  1:152417/151‑1 (MQ=255)                         gCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTggc                                                                                                                       <  1:617418/151‑1 (MQ=255)                          cTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTggcg                                                                                                                      >  2:889389/1‑151 (MQ=255)                            gACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTggcgg                                                                                                                     <  1:616591/150‑1 (MQ=255)                             aCTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTggcggc                                                                                                                    >  2:1227628/1‑150 (MQ=255)                               ttACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTc                                                                                                                  >  2:1244757/1‑150 (MQ=255)                                tACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTc                                                                                                                  <  1:426890/149‑1 (MQ=255)                                 aCGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATa                                                                                                               <  1:993185/151‑1 (MQ=255)                                    gcggACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTg                                                                                                            <  2:597026/151‑1 (MQ=255)                                     cggACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGa                                                                                                           <  1:1232913/151‑1 (MQ=255)                                      ggACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAg                                                                                                          <  2:766784/151‑1 (MQ=255)                                           gAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGt                                                                                                     <  2:399699/151‑1 (MQ=255)                                            aGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGtt                                                                                                    <  1:255668/151‑1 (MQ=255)                                            aGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGtt                                                                                                    >  1:986222/1‑151 (MQ=255)                                               aCGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTaa                                                                                                  <  2:6576/150‑1 (MQ=255)                                               aCGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAAt                                                                                                 <  2:856395/151‑1 (MQ=255)                                                cGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATg                                                                                                <  1:968263/151‑1 (MQ=255)                                                  acacacAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCt                                                                                              <  2:26558/151‑1 (MQ=255)                                                             cAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGcacacac                                                                                    <  1:98921/150‑1 (MQ=255)                                                              aGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACacaa                                                                                  <  1:188382/151‑1 (MQ=255)                                                               gCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACacaa                                                                                  >  1:800769/1‑150 (MQ=255)                                                                 tGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACacaaac                                                                                >  2:633353/1‑150 (MQ=255)                                                                     gcagcaAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGc                                                                            >  2:423709/1‑150 (MQ=255)                                                                     gcagcaAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCa                                                                           <  1:927899/151‑1 (MQ=255)                                                                       agcaAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAAt                                                                         <  2:1262507/151‑1 (MQ=255)                                                                         caAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTc                                                                       <  2:1057574/151‑1 (MQ=255)                                                                          aaaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTcc                                                                      >  2:1047372/1‑151 (MQ=255)                                                                          aaaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTcc                                                                      >  2:1148110/1‑151 (MQ=255)                                                                             aGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCAtt                                                                   >  2:285135/1‑151 (MQ=255)                                                                             aGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCAtt                                                                   <  2:872901/151‑1 (MQ=255)                                                                               tgtTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTg                                                                 >  2:216385/1‑151 (MQ=255)                                                                                gtTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTg                                                                 <  1:452593/150‑1 (MQ=255)                                                                                gtTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGt                                                                <  1:752618/151‑1 (MQ=255)                                                                                 ttCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGt                                                                >  2:952142/1‑150 (MQ=255)                                                                                  tCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTa                                                               <  1:659523/150‑1 (MQ=255)                                                                                  tCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTa                                                               <  2:759329/150‑1 (MQ=255)                                                                                  tCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTa                                                               >  2:223171/1‑150 (MQ=255)                                                                                     gATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAAtgt                                                           <  2:1274873/151‑1 (MQ=255)                                                                                         ggCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCt                                                       >  2:933104/1‑151 (MQ=255)                                                                                             acagcaacaAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCt                                                   <  1:1007368/151‑1 (MQ=255)                                                                                               agcaacaAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTgg                                                 >  1:341741/1‑151 (MQ=255)                                                                                                  aacaaATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGc                                                >  1:1121824/1‑149 (MQ=255)                                                                                                     aaaTGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGttt                                           <  1:360607/151‑1 (MQ=255)                                                                                                     aaaTGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGttt                                           <  1:292360/151‑1 (MQ=255)                                                                                                     aaaTGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGttt                                           >  2:64731/1‑151 (MQ=255)                                                                                                        tGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCAt                                        >  2:447860/1‑151 (MQ=255)                                                                                                          ttCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATcc                                      >  2:618726/1‑151 (MQ=255)                                                                                                           tctcAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCg                                     >  1:1245766/1‑151 (MQ=255)                                                                                                              cagcagATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGa                                   <  2:314459/150‑1 (MQ=255)                                                                                                              cagcagATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGa                                   <  1:809408/150‑1 (MQ=255)                                                                                                              cagcagATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGa                                   <  1:198659/150‑1 (MQ=255)                                                                                                               agcagATCGAGGTCGAGGTTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAc                                 <  1:424422/151‑1 (MQ=255)                                                                                                                  agATCGAGGTCGAGGTTACTTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCAATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAcc                                >  1:903311/1‑149 (MQ=255)                                                                                                                      cgaggtcgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGAc                           <  1:1244719/150‑1 (MQ=255)                                                                                                                      cgaggtcgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACg                          >  2:979040/1‑151 (MQ=255)                                                                                                                      cgaggtcgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACg                          <  2:1251327/151‑1 (MQ=255)                                                                                                                       ggggtcgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTACTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACg                          >  1:1083473/3‑150 (MQ=255)                                                                                                                         ggtcgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGaaa                       <  2:494132/151‑1 (MQ=255)                                                                                                                         ggtcgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGaa                        >  2:474130/1‑150 (MQ=255)                                                                                                                           tcgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAg                      >  2:105110/1‑150 (MQ=255)                                                                                                                            cgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGt                     >  1:827/1‑150 (MQ=255)                                                                                                                            cgaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGt                     >  2:534068/1‑150 (MQ=255)                                                                                                                             gaggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTa                    >  1:152826/1‑150 (MQ=255)                                                                                                                               ggtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTaaaa                 <  2:328439/151‑1 (MQ=255)                                                                                                                                gtTAATTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTTCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTaaaaa                <  1:1023287/151‑1 (MQ=255)                                                                                                                                   aaTTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGCCGAAAGTAAAAATGc             <  1:980243/151‑1 (MQ=255)                                                                                                                                   aaTTATCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGc             >  1:329525/1‑151 (MQ=255)                                                                                                                                       aTCGGACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCatat         <  2:849489/151‑1 (MQ=255)                                                                                                                                           gACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGt     >  2:355312/1‑151 (MQ=255)                                                                                                                                           gACGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGt     >  2:252889/1‑151 (MQ=255)                                                                                                                                            aCGATTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTATGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGtt    >  1:238383/1‑151 (MQ=255)                                                                                                                                               aTTTACACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGc  >  2:293015/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                  CGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGC  >  NC_000913/2406485‑2406776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑