| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,421,650 | (C)7→8 | coding (532/858 nt) | ydaU → | Rac prophage; conserved protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,421,643 | 1 | . | C | 94.6% | 319.1 / 8.6 | 92 | coding (525/858 nt) | ydaU | Rac prophage; conserved protein |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base C (41/46); total (44/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.32e-01 | |||||||||||
CAGAAAGGAAGCAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAAT‑‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAGGGCGCTAAC > NC_000913/1421496‑1421787 | cAGAAAGGAAGCAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAAT‑‑cc < 2:223586/150‑1 (MQ=255) aaaGGAAGCAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAAT‑‑ccccc‑c < 1:602124/151‑1 (MQ=255) aaGGAAGCAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAAT‑‑ccccc‑cc < 1:806800/151‑1 (MQ=255) aGCAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAAT‑‑CCCCC‑CCcgggg < 1:1030876/151‑1 (MQ=255) aGCAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAAT‑‑CCCCC‑CCcgggg > 1:112021/1‑151 (MQ=255) cAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAAT‑‑CCCCC‑CCcggggg > 2:1227169/1‑149 (MQ=255) gTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCg < 1:1041543/150‑1 (MQ=255) tCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAg < 1:40388/150‑1 (MQ=255) aaacaaaacaAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGgtg > 2:1284335/1‑151 (MQ=255) aaacaaaacaAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGgtg < 2:1396895/151‑1 (MQ=255) aacaaaacaaGAGAGAAATTTAACAGGTGATCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGgtgt > 2:1684298/1‑151 (MQ=255) acaaaacaaGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTc < 2:484251/151‑1 (MQ=255) caaaacaaGATAAAAAACGAACAAGTGGTCAAACATATGTTGAATTAGGGGTTGAACATGATGTAAACACAAATTCAAAGAAAAAAGACACAGATAAAGATCTAAAAACAGACCCCCGCCGAAAA‑‑CCCCC‑CATGCGGAATCGGGGTGTc < 1:778949/149‑1 (MQ=255) caaaacaaGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCa < 1:1110871/151‑1 (MQ=255) caaaacaaGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATACCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGgtgt > 1:1277213/1‑149 (MQ=255) aaaacaaGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCa > 2:377085/1‑150 (MQ=255) aaaacaaGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCa > 2:433192/1‑150 (MQ=255) acaaGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCaaaa > 2:1013552/1‑150 (MQ=255) acaaGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTCTCaaaaa < 1:1340796/151‑1 (MQ=255) agagagAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGtt > 1:1658421/1‑151 (MQ=255) gagagaAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGttt > 1:449770/1‑151 (MQ=255) gagaAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTg > 1:1263015/1‑150 (MQ=255) gaAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGAcc < 2:88398/151‑1 (MQ=255) aaaTTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGAccc > 1:1066265/1‑151 (MQ=255) ttAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCctct < 1:102392/150‑1 (MQ=255) aaCAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTg > 1:1557679/1‑149 (MQ=255) aGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGatat < 2:26986/151‑1 (MQ=255) gtgtTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTa < 1:1402710/151‑1 (MQ=255) tCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACtt < 2:1312984/150‑1 (MQ=255) cAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTg > 2:48635/1‑151 (MQ=255) cAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTg < 1:730393/151‑1 (MQ=255) aaaCAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGc > 1:1078664/1‑151 (MQ=255) aaaCAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGc > 1:1505755/1‑151 (MQ=255) aCAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCg < 1:1079846/151‑1 (MQ=255) aGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGaa < 2:1107752/151‑1 (MQ=255) gAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGAtt < 2:991587/151‑1 (MQ=255) gAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGAtt < 1:1435369/151‑1 (MQ=255) aaGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGAttt < 2:1435828/151‑1 (MQ=255) aGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTc < 2:1409572/151‑1 (MQ=255) tggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATCCCCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCt > 1:1485001/1‑151 (MQ=255) tggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTg > 1:76854/1‑151 (MQ=255) tggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAAATGGATTTCt > 1:1689487/1‑150 (MQ=255) ggtgTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGt > 2:1358403/1‑151 (MQ=255) ttGAACATTATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGtctc < 1:1351655/149‑1 (MQ=255) aaCATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCttt > 1:129716/1‑151 (MQ=255) aaCATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCttt < 2:1013965/151‑1 (MQ=255) gatgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCg < 1:433157/150‑1 (MQ=255) gatgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCg < 1:269371/150‑1 (MQ=255) atgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTg > 1:519272/1‑151 (MQ=255) atgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTg < 1:1122446/151‑1 (MQ=255) atgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTg < 2:8491/151‑1 (MQ=255) atgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTg > 2:974844/1‑151 (MQ=255) atgTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGAGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTg > 1:881090/1‑151 (MQ=255) cAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTg > 2:1693567/1‑151 (MQ=255) cAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTg < 2:1360686/151‑1 (MQ=255) aaCACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTgg < 2:1339178/151‑1 (MQ=255) aaCACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTgg < 1:1703526/151‑1 (MQ=255) cacaAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGt > 1:367787/1‑151 (MQ=255) acaAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGtt < 2:1519903/151‑1 (MQ=255) acaAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGtt < 2:1483984/151‑1 (MQ=255) aaaGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGa < 2:506030/151‑1 (MQ=255) aGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAAt < 2:1196176/151‑1 (MQ=255) aGGCAACT‑ATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAAtt > 1:56441/1‑151 (MQ=255) cAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTc < 2:1648131/151‑1 (MQ=255) cAAATAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTc > 1:438753/1‑151 (MQ=255) aaCTTATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGGCTCGCTTTGGCGTGAGTGGGTTGAATTTc < 2:269588/150‑1 (MQ=255) aaCTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCg < 2:1557774/151‑1 (MQ=255) aCTAATAAAGATTCAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTc < 1:250098/149‑1 (MQ=255) aCTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGc > 2:1088257/1‑151 (MQ=255) cTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGcc > 1:944249/1‑151 (MQ=255) taataaAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGcc > 1:1274914/1‑150 (MQ=255) aataaAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAg < 2:1028749/151‑1 (MQ=255) aGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCAtt > 1:583360/1‑151 (MQ=255) gATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTg < 1:86197/151‑1 (MQ=255) aTACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGc > 2:1540565/1‑151 (MQ=255) tACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCg > 1:640698/1‑151 (MQ=255) aGATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGaa > 1:1298644/1‑150 (MQ=255) gATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGaaaa < 1:1358311/151‑1 (MQ=255) gATAAAGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGaaaa < 1:1284242/151‑1 (MQ=255) aGATCTAAAAACAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGAt < 1:1088172/151‑1 (MQ=255) aaaaaCAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGTATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGa < 1:1349196/149‑1 (MQ=255) aaaaaCAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGa < 1:866833/149‑1 (MQ=255) agcAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGa < 2:286709/149‑1 (MQ=255) aaCAGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGa < 1:800812/151‑1 (MQ=255) aGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGc > 2:537430/1‑150 (MQ=255) aGATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGc > 2:928509/1‑150 (MQ=255) gATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGc > 1:277159/1‑149 (MQ=255) gATCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAg < 2:261037/151‑1 (MQ=255) aTCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAgg > 1:1116534/1‑151 (MQ=255) aTCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAgg < 1:1360750/151‑1 (MQ=255) tCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAggg > 2:1243900/1‑151 (MQ=255) tCCCCCCCTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAggg > 1:1513665/1‑151 (MQ=255) cccccccTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAGGgc > 1:694706/1‑151 (MQ=255) ccTAAATC‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAGGGCGCTa > 1:1471854/1‑150 (MQ=255) cTAAAT‑‑CCCCCTCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTTGAATGGAGCAGGGCGCTAAc > 1:1689355/1‑151 (MQ=255) | CAGAAAGGAAGCAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAAT‑‑CCCCC‑CCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAGGGCGCTAAC > NC_000913/1421496‑1421787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |