| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,012 | 1 | . | G | 73.6% | 140.1 / 51.9 | 53 | intergenic (‑131/+57) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (5/9); new base G (29/10); total (34/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.06e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
TCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGT > NC_000913/379865‑380152 | tcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑ggg > 1:681281/1‑151 (MQ=255)tcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑ggg > 2:416147/1‑151 (MQ=255)tcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑ggg > 2:749634/1‑151 (MQ=255)tcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑gg < 1:1686283/150‑1 (MQ=255)tcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑g < 1:1214804/149‑1 (MQ=255) ggcgTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCTGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑gggggg > 1:697378/4‑151 (MQ=255) gAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑ggggggg > 1:804307/1‑151 (MQ=255) tGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑gggggggggggg > 1:1656780/1‑148 (MQ=255) cATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGG‑‑‑CTAATCg < 1:1254757/151‑1 (MQ=255) tCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑gggggggggggggctaatcg > 2:979347/1‑140 (MQ=255) tCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑ggggggggggggctattcg > 1:880364/1‑140 (MQ=255) tcatcaTCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCGGGGa > 2:439632/1‑150 (MQ=255) catcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGgcc > 1:229606/1‑150 (MQ=255) tgcaaaaaaTATACTAAGGGGGGGTATTTTATATGAAAATCCACCCCCCCCTATAATAAATAACAAGGGAAAAAAAAATTTATCGGGTG‑ATGGGGGGCG‑AAAAAAAAAGAGGAAGGGG‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAg < 2:148973/137‑1 (MQ=255) gcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AG‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGAt > 2:148165/1‑149 (MQ=255) atatACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACCCTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg < 2:1251288/151‑1 (MQ=255) atatACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCg > 2:743325/1‑145 (MQ=255) taCTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCCGGGAAGGCCGCCCCGGATAgcgg > 1:1136004/1‑149 (MQ=255) taCTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 2:1355529/1‑150 (MQ=255) tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGCCGGGGAGGGCCCCCCCGGATAgcggggg > 1:1271744/1‑148 (MQ=255) taGGGGGTTATTTTATATGTCAATGCATACCCCCCTATAGTATAAAACACTGGAGAATAAAATTTATCGGGTG‑AATGTGGTGG‑GAAAACAAAGAGGAA‑‑‑AG‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg < 2:605777/150‑1 (MQ=255) ggggggTATTTTATATGTAAATGCATCCCCCCCTATAGAATATAACCCGGGAGAAAAAAATTTATCGGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa < 1:1625468/148‑1 (MQ=255) ggggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCGGGGAAGGCCGCCCCGGATAgcgggggg > 2:338142/1‑147 (MQ=255) ggggagTTTTTTATATGTAAACCCACCCCCCCCTAAAATAAAAAAAACGGGAAAAAAAAATTTTCCCGGGG‑AGGGGGGGGGAAAAAAAAAAGGGGAA‑‑‑GGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa < 1:1610390/151‑1 (MQ=255) ggggTTTTTTATTTTTAAATGCACCCCCCCCTATAATAAAAAACAAGGGAAAAAAAAATTT‑TCCGGGGAAATGGGGGGG‑AAAAAAAAAGGGGAAGG‑G‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAgg < 2:519061/151‑1 (MQ=255) aTTCTATATGTGAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGAAGGGAAGGCCGCCCGGGATAGAGGGGGGCAGAAGGaa > 1:1425686/1‑149 (MQ=255) tCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGaa > 2:494643/1‑146 (MQ=255) atatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATAAGAAtt > 1:1397500/1‑151 (MQ=255) tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 2:540551/1‑151 (MQ=255) tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 1:232870/1‑150 (MQ=255) atGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGAAAGGGGGGGGCAGAAGGAATCGGAATTTc > 1:1438778/1‑151 (MQ=255) tCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGt > 2:691777/1‑151 (MQ=255) gCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc > 2:1609261/1‑150 (MQ=255) gCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGAAAGCGGGGGGCAGAAGGAATCAGAATTTCCAgg > 1:1127766/1‑147 (MQ=255) cATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGAAAGGCCCCCCCGGATAGGGGGGGGGAGAAGGAATCAAATTTTCCAggac > 1:1608383/1‑147 (MQ=255) atccccccTATAGAATAAAAAAATGGAAAATAAAATTTTTCCGGGA‑AATGGGGCAA‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAg < 1:366131/147‑1 (MQ=255) ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg > 1:58329/1‑151 (MQ=255) ccTAAAGTATAAAACACTGAAAAATAAAATTTCGCCGGTT‑AATGTGGGCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 2:1438875/151‑1 (MQ=255) ataGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCa > 2:334070/1‑150 (MQ=255) gTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCCCCCCGGAAAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 1:1646647/1‑150 (MQ=255) tatataACACGGGAGAATAAAATTTATCCGGGG‑AATGTGGTCG‑GAAAAAAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAg < 1:510543/147‑1 (MQ=255) atataACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGGGA‑CTAATCAGCAGGGAAAAACGCCCAGGGTAGCGGGGGGCTAAGGGAACAAAAATTTCCGGGGAGGACGGCCTGCCAGt > 1:1635795/1‑147 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCTCCCCGGATAGCGGGCGGCAGAAGGAATCAGATTTTCCAGGTCAGACGGGCTGCAAGTTg > 2:262201/1‑148 (MQ=255) taACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGGGGCAGAAGGAATCAGAATTTCCAGGGCAGACGGGCGGCAAGTTg > 1:49637/1‑147 (MQ=255) taACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGGGGACTAATCGGCAGGGAAGGCCCCCCCGGAAAGGGGGCGGCAGAGGGAATCAGAATTTCCGGGTCCGGGGGGCTGCAGGTTg > 1:636529/1‑147 (MQ=255) aagacTGGAAAAAAAAATTTATCTGGGG‑AAGGGGGGAG‑AAAAAAAAAGGGGAAGGGG‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCaa < 2:1656888/139‑1 (MQ=255) cacTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCCCCCCGGAAAGCGGGGGGCAGAAGGAATCAGAATTTcc > 1:1667405/1‑122 (MQ=255) agaAAAAAATTTTCCCGGGG‑AATTGGGGCG‑AAAAAAAAAGGGGAAGGGG‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGtt < 1:707104/147‑1 (MQ=255) aaTAAAATTTATCCGGTG‑ACTGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGGGC‑CTAATCGGCAGGGAAGGCCCCCCCGGAAAGGGGGGGGCAGAAGGAATCAGAATTTCCAGGTCCGCCGGGGTGACAGTTGCGGACAGATaaaaa > 1:1528319/1‑148 (MQ=255) aaaaTTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCgg < 1:881144/150‑1 (MQ=255) aaaaTTTATCCGGTG‑AATGGGGTCG‑AAAAACAAAGAGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCg < 2:1224114/151‑1 (MQ=255) aaaTTTAACCGGGG‑AATGGGGTGG‑GAAAAAAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCg < 1:407125/151‑1 (MQ=255) ttATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGTG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 1:1604824/150‑1 (MQ=255) tCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCTTTAAAATCATCGGTTggg > 2:322185/1‑150 (MQ=255) tCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGAGGGAAAGGCCCCCCCGGAAAGGGGGGGGCAAAGGGAATAAGAATTTCCGGGTCAGAGGGGCGGAAAGTTGCAGCCCGTAAAAATCATGGGTTgggg > 2:529321/1‑151 (MQ=255) ccGGTG‑AATGTGGTCG‑GAAAACAAAGGGGAA‑‑‑AGG‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 1:805895/151‑1 (MQ=255) ccGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGAAAGGGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCGGCAAGTTGCAGACCGTTAAAATCAACGGTTgggg > 1:1587713/1‑150 (MQ=255) ggTG‑AATGGGGTGG‑AAAAAAAAAGAGGAAGGGG‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtgt < 1:1582423/151‑1 (MQ=255) tgtgGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 2:1221142/1‑150 (MQ=255) tgGTCG‑GAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACca > 2:527163/1‑150 (MQ=255) gAAAACAAAGAGGAA‑‑‑AGGGGGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCCCCCCGGAAAGGGGGGGGCAGAAGGAATCAAAATTTCCAGGTCAGACGGGCTGCAAGTTGGAGACCGTTAAAATCATCGGTTGGGGGGGCGTACCACACttt > 2:540515/1‑150 (MQ=255) aCAAAGAGGAA‑‑‑AG‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGcc < 1:112331/151‑1 (MQ=255) cAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGt > 2:925645/1‑151 (MQ=255) | TCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTG‑AATGTGGTCG‑GAAAACAAAGAGGAA‑‑‑A‑‑‑GGGGGGGGGG‑‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGT > NC_000913/379865‑380152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |