Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,270,481	1	.	C	67.5%	210.8 / 81.0	83	intergenic (+879/+144)	yhaC/garK	pentapetide repeats‑related protein/glycerate kinase I
Reads supporting (aligned to +/- strand):  ref base . (26/1);  new base C (19/37);  total (45/38)
Fisher's exact test for biased strand distribution p-value = 1.96e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCCTATTTGGCCTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTT‑CCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGCCCTTGT  >  NC_000913/3270332‑3270625                                                                                                                                                            |                                                                                                                                                    cccTATTTGGCCTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTT‑c                                                                                                                                                    <  1:1560390/151‑1 (MQ=255)  ccTATTTGGCCTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTT‑cc                                                                                                                                                   <  2:1084089/151‑1 (MQ=255)   cTATTTGGCCTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTTTCTCTTTTTCA‑CCGGGC‑G‑T‑GGG‑GTT‑ccc                                                                                                                                                  >  2:1162246/1‑151 (MQ=255)       ttGGCCTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGGTTTTTCTCTTTTTCC‑CTGGTC‑G‑C‑GGG‑GTT‑tcccccc                                                                                                                                              >  1:922907/1‑151 (MQ=255)           ccTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTT‑ccccccccagg                                                                                                                                          <  2:155665/151‑5 (MQ=255)              tGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTGTTGGA‑CTGGGC‑G‑TGGGG‑TTT‑CCCCCCCCGGC‑g                                                                                                                                        >  2:1031743/1‑150 (MQ=255)              tGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTTTTGCA‑CTGGTCGG‑G‑GGG‑TTT‑cccccccc                                                                                                                                             >  1:348490/1‑145 (MQ=255)              tGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTTCA‑CTCGTC‑G‑TGGGG‑TTT‑cccccccc                                                                                                                                             >  2:592627/1‑145 (MQ=255)              tGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTT‑ccccccccaggc                                                                                                                                         <  2:43599/149‑6 (MQ=255)              tGCTCCGGGTGGAGTTGACCGGGCCACGGACTGTTCCCAGCGGCCCGGTGCCCTCTTACCGCCCCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGGGGTTTGCTCTCGGTTGAT‑TTGGTC‑G‑T‑GGG‑TTT‑ccccccccagg                                                                                                                                          <  1:1436629/148‑5 (MQ=255)               gCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑t                                                                                                                                      <  2:1232531/150‑1 (MQ=255)                  ccGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTGTTGCA‑CTGGTC‑G‑TGGGG‑TTT‑cccccccccggggt                                                                                                                                       >  1:1074918/1‑141 (MQ=255)                    gggTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGTGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTg                                                                                                                                <  2:941128/151‑1 (MQ=255)                    gggTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGGTCTCTGTTGCA‑CTGGGC‑G‑T‑GGGTTTT‑CCCCCCCCCGC‑G‑TTAcc                                                                                                                                  >  2:964081/1‑149 (MQ=255)                             ttACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTGCC‑CTTGTC‑G‑TGGGG‑TTT‑CCCCCCCCCGC‑G‑GTTCCCGGCAccc                                                                                                                          >  2:1007778/1‑148 (MQ=255)                              tACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTTTCTCTTTTTCA‑CTGGGC‑G‑G‑CGG‑TTTCCCCCCCCCCGC‑G‑TTTCCTGGCAccc                                                                                                                          >  2:1620282/1‑147 (MQ=255)                              tACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTTCA‑CTGGTC‑G‑TGGGG‑TTT‑CCCCCCCCCGC‑G‑GTTCCCCGCAccccccc                                                                                                                      >  2:761508/1‑147 (MQ=255)                              tACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTGTC‑CTGGGC‑G‑TGGGG‑TTC‑CCCCCCCCCGC‑G‑TTACCCGGCccccctcc                                                                                                                      >  1:1614894/1‑147 (MQ=255)                              tACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGc                                                                                                                       <  2:1063846/150‑1 (MQ=255)                                ccGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCt                                                                                                                    <  2:653831/151‑1 (MQ=255)                                  gTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTTTCTTTTGCA‑CTGGTC‑G‑TGGGG‑TTT‑CCCCCCCCCGC‑G‑GTTCCCGGCCCCCCGccc                                                                                                                     >  2:274206/1‑148 (MQ=255)                                   tGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAt                                                                                                                  <  1:946054/150‑1 (MQ=255)                                      cACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTGTTGCA‑CTGGTC‑G‑TGGGG‑TTT‑CCCCCCCCGGC‑G‑GTACCTGGCACCCCGCCCCAttg                                                                                                                >  2:1660863/1‑147 (MQ=255)                                        cGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAg                                                                                                             <  1:1654801/149‑1 (MQ=255)                                         ggACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGccc                                                                                                          <  1:1298645/151‑1 (MQ=255)                                         ggACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGccc                                                                                                          <  1:855431/151‑1 (MQ=255)                                          gACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGGTTTT‑CCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCg                                                                                                         <  2:1166634/151‑1 (MQ=255)                                            cTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCgg                                                                                                        <  2:1218323/150‑1 (MQ=255)                                              gTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGa                                                                                                       <  1:1655782/149‑1 (MQ=255)                                              gTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGa                                                                                                       <  1:1181676/149‑1 (MQ=255)                                              gTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACt                                                                                                     <  2:25531/151‑1 (MQ=255)                                                tACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTGTTGCA‑CTTGTC‑G‑TGGGG‑TTT‑CCCCCCCCCGC‑G‑GTTCCTTGCCCCCCCCCCCAT‑GGGGccccggcctt                                                                                                   >  1:289541/1‑144 (MQ=255)                                                 aCCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTGTCTCTTTTGCT‑CTGGGCGG‑T‑GGG‑TTT‑CCCCCCCCCGC‑G‑GTACCTGGCACCCTGCCCCTT‑GGAGCCCGGGCtt                                                                                                    >  1:958805/1‑149 (MQ=255)                                                             gTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGcc                                                                                      <  2:969717/151‑1 (MQ=255)                                                                 gcTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTTTTTTTCC‑CTTGGC‑G‑T‑GGGTTTT‑CCCCCCCCCGC‑G‑TTTCCCGGCCCCCCCCCCCTT‑TGGGCCCCGGCTTTCCCTcccccccccc                                                                                     >  1:401277/1‑148 (MQ=255)                                                                 gcTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTGTTGCA‑CTGGTC‑G‑TGGGG‑TTT‑CCCCCCCACGC‑G‑GTTCCCCGCCCCCCCCCCCCT‑GGGGCCCCGGCTTTTCTCcccccccccccgc                                                                                  >  2:1062285/1‑148 (MQ=255)                                                                   tctTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCCGTTGTA‑TAGCGC‑GTT‑GGG‑TTG‑CCCCCCCACGC‑G‑GGAACATGGACCCTCCCCCATGGGGGCCCGGCCTTTCCTCCCC‑CCGcccacctc                                                                                >  1:945283/1‑146 (MQ=255)                                                                   tctTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCCCTCTTCTGCA‑CAGGTT‑T‑TGGGG‑TTT‑CCCCCCCCAGC‑GCTTCCGTGGCCCCCGCCCCCTT‑GGGGCCCGCCCTTT‑CTCCCCCCCCCCCCtc                                                                                  >  2:1274358/1‑149 (MQ=255)                                                                        ccGCACCCTTTCCCCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCCCTCTGTTGCA‑CTGGTC‑T‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCg                                                                           <  2:1333382/151‑1 (MQ=255)                                                                        ccGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTTT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCg                                                                           <  2:1582298/151‑1 (MQ=255)                                                                        ccGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTccccc                                                                            <  2:71634/150‑1 (MQ=255)                                                                        ccGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCg                                                                           <  2:1204820/151‑1 (MQ=255)                                                                          gCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTTCA‑CCGGGC‑G‑TGGGG‑TTT‑CCCCCCCCCGC‑G‑GTTCCCTGCACCCCGCCCCATGGGGGCCCGGCCTTT‑CTCCCCCCCCCCCGTCTccccc                                                                            >  2:1097543/1‑148 (MQ=255)                                                                             cccTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTGTTTCA‑CCGGTC‑G‑TGGGG‑TTC‑CCCCCCCCCGC‑G‑GTACCCGGCACCCTCCCCCAT‑GGGGCCCGGACTTTCCTCCCCCCCCCCCCTCTccccccca                                                                         >  2:372828/1‑145 (MQ=255)                                                                              ccTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTGCA‑CTGGTC‑G‑TGGGG‑TTT‑CCCCCCCCGGC‑G‑TTACCTGGCACCCTGCCCCAT‑TGAGCCCCGACTTTTCTCCCCCCCCCCCCCCCCCCCCCCAGAgg                                                                     >  2:972444/1‑151 (MQ=255)                                                                              ccTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCCGTTTCC‑CCGGGC‑C‑T‑GGGTTTT‑CCCCCCCCCGC‑C‑TTACCTGGCACCCCGCCCCTT‑GGAGGCCCGGCTTTCCCCCCCTCcccccccccccccc                                                                            >  2:1297290/1‑144 (MQ=255)                                                                                  tCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTGTC‑CTGGTC‑G‑TGGGG‑GTT‑CCCCCCCCCGC‑G‑TTACCTGTGACCCCCCCCCAT‑TGGGGCCGGGCTTTTCTCCCCCCCCCCCCTCCCCCCCCCAGAgggc                                                                   >  1:307654/1‑147 (MQ=255)                                                                                    aCCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCCCCCTTCTGCA‑CTGGTT‑G‑TGGGG‑TTT‑CCCCCCCCGGC‑G‑GTTCCTGGGACCCTGCCCTTT‑TGAACCCGGACTTTCCCCCCCCCCCCCCCTCTCCCCCCGCGAGggcgacg                                                               >  2:614997/1‑151 (MQ=255)                                                                                      ccTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTTTTTTC‑CTGGGCGG‑G‑GGG‑TTT‑CCCCCCCCCGC‑G‑GTACCTGGCACCCCCCCCCAT‑GGGGCCCCGACCTTCCTCCCCCCCCCCCCCCTCCCCCCCAGAGggcggcg                                                               >  1:1371602/1‑149 (MQ=255)                                                                                         tACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTTTCTCTGTTTCA‑CTGGTC‑G‑TGGGG‑TTT‑CCCCCCCCCGCGG‑TTACC‑GGCCCCCCGCCCCAT‑GGGGCCCCGGCTTTCCTCCCCCCCGCCCGCCTCCCCCCAAGAgggaga                                                                 >  2:688231/1‑140 (MQ=255)                                                                                         tACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGAcgacgacga                                                           <  2:1614992/150‑1 (MQ=255)                                                                                           ccTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGTTCTCTGTTTCACCGGGCC‑G‑G‑GGG‑TTT‑CCCCCCCCGGC‑G‑GTACCTGGCACCCCTCCCTAT‑TGAACCCCGACTTTTCTCCCCCCCCCCCCTCTCCCCCCCAAAGgacgcc                                                                >  2:55538/1‑141 (MQ=255)                                                                                           ccTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAgc                                                        <  2:1618856/151‑1 (MQ=255)                                                                                             tGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCACTGTTGCA‑CAGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAgc                                                        <  1:935351/149‑1 (MQ=255)                                                                                              gATCCCGCTTGCGCGGGCCATCGGCGGTTTTTTCTCTTTTTCT‑ATGGTCGG‑T‑GGG‑TTT‑CCCCCCCCCGC‑G‑GTACCTTGCACCCTGCCCTCA‑GGGGCCCCGGCCTTCCTCCCCCCCCCCCCTCCCCCCCCCAGAGggcgacg                                                               >  1:1333350/1‑141 (MQ=255)                                                                                              gATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAgcg                                                       <  2:791941/149‑1 (MQ=255)                                                                                                  ccGCTTGCGCGGGCCATCGGCGGTTTTCTTTCTATTGCA‑CCGGTC‑GAG‑GGG‑TTT‑CCCCCCCCAGC‑G‑TGTATGCGCACCCCGCCCTAT‑AGCACCCCGGCCTTCCTTTCCCCCCCCCGTCACCCCCCGAGAGGGAGACGACGAAgccg                                                      >  2:975445/1‑144 (MQ=255)                                                                                                     cTTGCGCGGGCCATCGGCGGTTTGCTCTCTTTTGCA‑CTTGTC‑G‑TGGGG‑TTT‑CCCCCCCCGGG‑G‑GTACCTGGCCCCCCCCCCCAT‑GGAGGCCGGGCTTTTCTCCCCCCCCCCCCCCTCCCCCGAAGAGGAGGCCGACGAAGCGGCGGCTg                                                >  1:551561/1‑149 (MQ=255)                                                                                                     cTTGCGCGGGCCATCGGCGGGTTTCTCTCTTTTGCA‑CTGGGC‑G‑T‑GGG‑GTT‑CCCCCCCCCGC‑G‑TTTCCTGGCCCCCCGCCCCAT‑GGGGCCCGGGCTTTTCCCCCCCCCCCCCCTCTCCCCCCCAAAGGGCGACGCCGGAgcgg                                                      >  1:329066/1‑142 (MQ=255)                                                                                                        gcgcGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTgg                                           <  2:85812/151‑1 (MQ=255)                                                                                                          gcgGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTc                                         <  1:1299849/151‑1 (MQ=255)                                                                                                              gCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCt                                     <  1:1170595/151‑1 (MQ=255)                                                                                                                cATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTc                                   <  2:157954/151‑1 (MQ=255)                                                                                                                 aTCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCg                                  <  2:1092177/151‑1 (MQ=255)                                                                                                                   cggcggTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgc                                <  2:922974/151‑1 (MQ=255)                                                                                                                     gcggTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgc                              <  2:431289/151‑1 (MQ=255)                                                                                                                     gcggTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgc                              >  2:653631/1‑151 (MQ=255)                                                                                                                       ggTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcg                             >  1:1708937/1‑150 (MQ=255)                                                                                                                        gTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCa                           <  1:700164/151‑1 (MQ=255)                                                                                                                         tttGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcgc                            >  2:724702/1‑149 (MQ=255)                                                                                                                          ttGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGt                         >  1:1714504/1‑151 (MQ=255)                                                                                                                           tGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGt                         >  2:476252/1‑150 (MQ=255)                                                                                                                            gCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGta                        <  1:160424/150‑1 (MQ=255)                                                                                                                                tctGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATag                     >  2:144410/1‑149 (MQ=255)                                                                                                                                 ctGTTGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATaga                    <  2:486957/149‑1 (MQ=255)                                                                                                                                     tGCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGttt              >  1:1666351/1‑151 (MQ=255)                                                                                                                                      gCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGttt              <  2:348516/150‑1 (MQ=255)                                                                                                                                      gCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGttt              <  1:207634/150‑1 (MQ=255)                                                                                                                                      gCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTg             >  1:1455159/1‑151 (MQ=255)                                                                                                                                      gCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTg             >  2:1267110/1‑151 (MQ=255)                                                                                                                                      gCA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTg             >  2:1059049/1‑151 (MQ=255)                                                                                                                                       cA‑CTGGTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTgc            >  2:94766/1‑151 (MQ=255)                                                                                                                                            ggTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTgcgc          <  1:587595/149‑1 (MQ=255)                                                                                                                                            ggTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTgcgc          <  2:1008990/149‑1 (MQ=255)                                                                                                                                             gTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGcc       <  1:372800/151‑1 (MQ=255)                                                                                                                                             gTC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGcc       >  2:129380/1‑151 (MQ=255)                                                                                                                                              tC‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACTTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGccc      >  2:303965/1‑151 (MQ=255)                                                                                                                                               c‑G‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGCCCt     >  1:1253012/1‑151 (MQ=255)                                                                                                                                                 g‑T‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGCCCtt    <  1:1162159/151‑1 (MQ=255)                                                                                                                                                   t‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGCCCtt    >  1:1066431/1‑150 (MQ=255)                                                                                                                                                   t‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGCCCTTg   >  1:1603996/1‑151 (MQ=255)                                                                                                                                                   t‑GGG‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGCCCTTg   >  2:1479057/1‑151 (MQ=255)                                                                                                                                                     ggg‑TTTCCCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGCCCTTGt  >  2:1030700/1‑151 (MQ=255)                                                                                                                                                            |                                                                                                                                                    CCCTATTTGGCCTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCA‑CTGGTC‑G‑T‑GGG‑TTT‑CCCCCCCAGGC‑G‑TTACCTGGCACCCTGCCCTAT‑GGAGCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTGCGCGCCCTTGT  >  NC_000913/3270332‑3270625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑