| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,896 | A→G | V55A (GTG→GCG) | rhtB ← | homoserine, homoserine lactone and S‑methyl‑methionine efflux pump |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,896 | 0 | A | G | 97.9% | 349.3 / ‑1.5 | 96 | V55A (GTG→GCG) | rhtB | homoserine, homoserine lactone and S‑methyl‑methionine efflux pump |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (48/46); total (49/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.52e-01 | |||||||||||
GAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAGGCAA > NC_000913/4008749‑4009040 | gagGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGcgca > 1:39894/1‑150 (MQ=255) ccAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATg > 1:695281/1‑151 (MQ=255) cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATg > 1:1624666/1‑150 (MQ=255) cGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATc > 2:869883/1‑151 (MQ=255) gATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCg > 1:357567/1‑151 (MQ=255) gATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGAAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATc > 1:1593072/1‑150 (MQ=255) aaTTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTc > 1:1445300/1‑151 (MQ=255) aaTTGCACCAGCCGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTc > 2:1663306/1‑151 (MQ=255) gCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGa > 2:539314/1‑150 (MQ=255) cACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGa > 1:1669150/1‑149 (MQ=255) cAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGccc > 1:918312/1‑151 (MQ=255) cAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGccc > 1:362479/1‑151 (MQ=255) cggcgCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGc > 2:1577006/1‑151 (MQ=255) ggcgCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCa < 2:1479614/151‑1 (MQ=255) gcgcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCaa < 2:1489324/151‑1 (MQ=255) cgcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAt < 1:525692/151‑1 (MQ=255) cgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAt > 2:866535/1‑149 (MQ=255) gcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGa < 1:1087575/151‑1 (MQ=255) ggATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccg < 1:1183514/150‑1 (MQ=255) gATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGAGGGAAAATAGCGTCCCCAACCCCACGCCACCCAGCGCAATATGAATCGCCCGTCCGGTCTGAAGCCCAGCAATACACGCCatc < 1:306766/148‑3 (MQ=255) aTTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgc < 1:23602/151‑1 (MQ=255) cccAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg < 1:743768/150‑1 (MQ=255) ccAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCTAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgcg < 1:172566/151‑1 (MQ=255) cAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGa < 2:142814/151‑1 (MQ=255) aTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGt < 2:1097891/151‑1 (MQ=255) cAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTgg > 2:1467732/1‑151 (MQ=255) cAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTg < 2:884367/150‑1 (MQ=255) aaGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGt > 1:1573893/1‑151 (MQ=255) aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGtt < 1:1113129/151‑1 (MQ=255) tAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTg > 2:1643046/1‑150 (MQ=255) aGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGc > 2:1624933/1‑151 (MQ=255) ccGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGGTAACCGTGGTTGAGCg > 1:510200/1‑150 (MQ=255) ccGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGa < 1:740835/151‑1 (MQ=255) cgcgCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCg > 1:1074951/1‑149 (MQ=255) gcgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAgg > 2:427576/1‑151 (MQ=255) tGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTc > 2:887391/1‑151 (MQ=255) gCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTc > 1:590596/1‑150 (MQ=255) cccACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCAt > 1:1539999/1‑151 (MQ=255) cccACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCAt < 1:1426724/151‑1 (MQ=255) acttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAgt < 2:1198556/151‑1 (MQ=255) ttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAgtgt > 1:386626/1‑151 (MQ=255) tcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGtt > 1:271248/1‑151 (MQ=255) caacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTg > 2:1568083/1‑151 (MQ=255) aacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCTATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGa < 2:76966/151‑1 (MQ=255) acacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGAt < 2:458917/151‑1 (MQ=255) cacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGAtt > 2:916265/1‑151 (MQ=255) acgtcgaaCGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTg < 2:281162/145‑1 (MQ=255) tcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCa < 1:1222430/150‑1 (MQ=255) aCGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCaga < 1:1179955/151‑1 (MQ=255) cGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCaga < 1:1535014/150‑1 (MQ=255) cGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCag > 2:1388768/1‑149 (MQ=255) cAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGcc > 1:561471/1‑151 (MQ=255) aaTCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCt < 1:1386819/151‑1 (MQ=255) aaTCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCt < 1:1428823/151‑1 (MQ=255) aaTCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCt < 1:1631734/151‑1 (MQ=255) aTCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTg < 1:1356498/151‑1 (MQ=255) aTCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTg < 1:1049306/151‑1 (MQ=255) aTCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTg > 2:1702437/1‑151 (MQ=255) aTCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTg > 1:388185/1‑151 (MQ=255) cACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTgg < 1:269830/150‑1 (MQ=255) gAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACa < 1:767878/151‑1 (MQ=255) aGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAg < 1:149625/151‑1 (MQ=255) cGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGc > 1:79214/1‑151 (MQ=255) gggAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCt < 2:749560/151‑1 (MQ=255) gggAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCt > 2:1503312/1‑151 (MQ=255) ggAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCtt > 2:359231/1‑151 (MQ=255) ggAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCtt > 1:780417/1‑151 (MQ=255) gAAAATAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCtt > 2:589131/1‑150 (MQ=255) aaaaTAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTaa < 2:897580/151‑1 (MQ=255) aaaTAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTaaa < 1:1203602/151‑1 (MQ=255) aaaTAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTaa > 2:1400271/1‑150 (MQ=255) aaaTAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTaa > 1:337257/1‑150 (MQ=255) aTAGCGTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAAt < 1:477257/151‑1 (MQ=255) gTCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCg > 2:221983/1‑151 (MQ=255) tCCCCAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCg > 2:134076/1‑150 (MQ=255) ccccAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGa < 2:1005943/150‑1 (MQ=255) ccAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGt < 2:1399794/151‑1 (MQ=255) cAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTc < 1:1332362/151‑1 (MQ=255) cAACCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTc > 2:175115/1‑151 (MQ=255) aaCCCCACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTca < 1:1116791/151‑1 (MQ=255) ccccACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTcagc > 2:999708/1‑151 (MQ=255) cccACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTcagca < 2:1330247/151‑1 (MQ=255) cccACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTcagc > 1:850342/1‑150 (MQ=255) cccACGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTcagc > 1:853254/1‑150 (MQ=255) aCGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGt > 2:903383/1‑151 (MQ=255) cGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGt < 1:60038/150‑1 (MQ=255) cGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGt > 2:1041399/1‑150 (MQ=255) cGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTa < 1:600327/151‑1 (MQ=255) cGCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTa < 1:1472584/151‑1 (MQ=255) gCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAg < 1:1377659/151‑1 (MQ=255) gCCAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAg < 1:1345384/151‑1 (MQ=255) ccAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAgg > 1:1602119/1‑151 (MQ=255) ccAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAgg > 1:1175769/1‑151 (MQ=255) ccAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAgg > 1:106725/1‑151 (MQ=255) cAACCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAGGc < 1:382647/151‑1 (MQ=255) aCCAGCGCAATATGAATCGCCAGTTCGGTCTGAAGCCCAGCAATAGACGCCCCCGCGCCGCGATAACCGTGGTTGAGCGAGATGGTCATAGTGTTGAATGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGCTAGGCaa < 1:427541/151‑1 (MQ=255) aCCAGCGCAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAGGCaa < 2:304705/151‑1 (MQ=255) | GAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAGGTGGTCATAGTGTTGATTGCACCAGAGCCTGGCGACAGGCTTAAAATGATCGATGTCAGCAGGTAGGCAA > NC_000913/4008749‑4009040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |