Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,428,008 C→T pseudogene (315/402 nt) ytfA → pseudogene, related to transcriptional regulators

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,428,0080CT100.0% 396.8 / NA 99pseudogene (315/402 nt)ytfApseudogene, related to transcriptional regulators
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (57/42);  total (57/42)

ATTGGATGAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCCCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGTATCAATGGTT  >  NC_000913/4427864‑4428154
                                                                                                                                                |                                                                                                                                                  
aTTGGATGAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGc                                                                                                                                               >  1:1280178/1‑150 (MQ=255)
aTTGGATGAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGc                                                                                                                                               <  2:643719/150‑1 (MQ=255)
   ggATGAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTg                                                                                                                                           <  2:1386395/151‑1 (MQ=255)
       gAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGaa                                                                                                                                        <  1:696227/150‑1 (MQ=255)
       gAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGa                                                                                                                                         >  2:33265/1‑149 (MQ=255)
         aGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGcc                                                                                                                                     <  1:539693/151‑1 (MQ=255)
          gggAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGcc                                                                                                                                     >  1:639385/1‑150 (MQ=255)
              agaaACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACg                                                                                                                                >  2:1377963/1‑151 (MQ=255)
                aaaCACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTa                                                                                                                              <  1:673146/151‑1 (MQ=255)
                 aaCACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTa                                                                                                                              >  1:1248179/1‑150 (MQ=255)
                 aaCACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTa                                                                                                                              >  1:86369/1‑150 (MQ=255)
                  acacAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTa                                                                                                                              >  2:1160170/1‑149 (MQ=255)
                    acaATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGt                                                                                                                          >  2:1676026/1‑151 (MQ=255)
                      aaTATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGtca                                                                                                                        <  2:475835/151‑1 (MQ=255)
                         atTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATANTATTTGATCAACCAGCATACGCTTGGCCNGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGtcatc                                                                                                                      <  2:739225/150‑1 (MQ=255)
                           ttttAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCaa                                                                                                                    <  2:34238/150‑1 (MQ=255)
                           ttttAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCaa                                                                                                                    >  1:814731/1‑150 (MQ=255)
                              tAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAag                                                                                                                  >  1:457954/1‑149 (MQ=255)
                               aaGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAag                                                                                                                  >  1:375746/1‑148 (MQ=255)
                                aGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGAc                                                                                                              <  1:608618/151‑1 (MQ=255)
                                 gCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGAc                                                                                                              >  2:1110886/1‑150 (MQ=255)
                                  ccAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACa                                                                                                             >  2:789868/1‑150 (MQ=255)
                                      atatCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCt                                                                                                        <  1:689325/151‑1 (MQ=255)
                                          cGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGc                                                                                                    <  2:626502/151‑1 (MQ=255)
                                           gACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCt                                                                                                   <  1:1107889/151‑1 (MQ=255)
                                           gACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCt                                                                                                   >  1:1706215/1‑151 (MQ=255)
                                           gACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCt                                                                                                   >  1:1482546/1‑151 (MQ=255)
                                              ccATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGc                                                                                                <  2:30193/151‑1 (MQ=255)
                                              ccATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGc                                                                                                <  2:345920/151‑1 (MQ=255)
                                              ccATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGc                                                                                                >  1:1342644/1‑151 (MQ=255)
                                               cATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCt                                                                                               >  2:278115/1‑151 (MQ=255)
                                                aTTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCtt                                                                                              >  1:658799/1‑151 (MQ=255)
                                                  tGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCttt                                                                                             <  1:443292/150‑1 (MQ=255)
                                                   gCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTg                                                                                           <  1:60833/151‑1 (MQ=255)
                                                     aGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGt                                                                                         >  1:166699/1‑151 (MQ=255)
                                                     aGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGt                                                                                         <  1:71425/151‑1 (MQ=255)
                                                      ggTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGtt                                                                                        >  1:1441275/1‑151 (MQ=255)
                                                         gAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGAc                                                                                     <  1:970881/151‑1 (MQ=255)
                                                            tattaatattGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCt                                                                                  >  2:164210/1‑151 (MQ=255)
                                                               taatattGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTc                                                                                >  2:553075/1‑150 (MQ=255)
                                                                 atattGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATc                                                                             <  2:543851/151‑1 (MQ=255)
                                                                   attGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTa                                                                           <  2:1041259/151‑1 (MQ=255)
                                                                      gctgcGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTAcc                                                                         <  1:1681221/150‑1 (MQ=255)
                                                                        tgcGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACcgcg                                                                      >  1:809871/1‑151 (MQ=255)
                                                                         gcgcTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCgcgc                                                                     >  1:555170/1‑151 (MQ=255)
                                                                         gcgcTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCgcgc                                                                     >  1:644794/1‑151 (MQ=255)
                                                                          cgcTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCgcgc                                                                     >  1:249502/1‑150 (MQ=255)
                                                                          cgcTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCa                                                                    <  2:1448026/151‑1 (MQ=255)
                                                                          cgcTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCa                                                                    <  2:1222555/151‑1 (MQ=255)
                                                                              tGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACg                                                                  <  2:473802/149‑1 (MQ=255)
                                                                              tGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGa                                                                 <  2:1316425/150‑1 (MQ=255)
                                                                              tGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGa                                                                 >  2:1287799/1‑150 (MQ=255)
                                                                              cggCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGa                                                                 >  2:1287832/2‑150 (MQ=255)
                                                                               ggCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGaa                                                                <  1:567888/150‑1 (MQ=255)
                                                                               ggCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAAt                                                               <  2:1069293/151‑1 (MQ=255)
                                                                               ggCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAAt                                                               <  1:1108148/151‑1 (MQ=255)
                                                                                  ggATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATaa                                                             >  1:200210/1‑150 (MQ=255)
                                                                                      attattTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTg                                                        >  2:517243/1‑151 (MQ=255)
                                                                                       ttattTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGc                                                       >  1:883311/1‑151 (MQ=255)
                                                                                        tattTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGcc                                                      >  2:813901/1‑151 (MQ=255)
                                                                                           ttGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCAt                                                    <  1:1160083/150‑1 (MQ=255)
                                                                                            tGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATcc                                                  >  1:1217679/1‑151 (MQ=255)
                                                                                              aTCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCgg                                                >  1:1221298/1‑151 (MQ=255)
                                                                                               tCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGc                                               >  2:148569/1‑151 (MQ=255)
                                                                                                cAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCt                                              >  1:114054/1‑151 (MQ=255)
                                                                                                 aaCCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTg                                             >  1:1405981/1‑151 (MQ=255)
                                                                                                  aCCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTgg                                            >  1:797916/1‑151 (MQ=255)
                                                                                                  aCCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTgg                                            >  2:45145/1‑151 (MQ=255)
                                                                                                    cAGCATACGCTTGCCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCg                                          <  2:1230210/151‑1 (MQ=255)
                                                                                                       cATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGt                                       <  1:136624/151‑1 (MQ=255)
                                                                                                         tACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCggg                                        >  1:1686883/1‑148 (MQ=255)
                                                                                                         tACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTg                                      >  1:871599/1‑150 (MQ=255)
                                                                                                           cGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGaa                                    >  1:536443/1‑150 (MQ=255)
                                                                                                            gCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAAc                                   >  1:1316002/1‑150 (MQ=255)
                                                                                                             cTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAAc                                   >  1:1211026/1‑149 (MQ=255)
                                                                                                             cTTGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACa                                  <  1:1614111/150‑1 (MQ=255)
                                                                                                              ttGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAgg                                >  2:1580970/1‑151 (MQ=255)
                                                                                                               tGGCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAgg                                >  2:977558/1‑150 (MQ=255)
                                                                                                                ggCCTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGa                               <  2:639443/150‑1 (MQ=255)
                                                                                                                   cTGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTg                           >  2:1667957/1‑151 (MQ=255)
                                                                                                                    tGGTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGt                          >  1:1229513/1‑151 (MQ=255)
                                                                                                                     ggTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGtt                         <  1:915203/151‑1 (MQ=255)
                                                                                                                     ggTTTATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGtt                         <  2:1342737/151‑1 (MQ=255)
                                                                                                                       tttATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGGGAACAGGACCTGTTg                        >  1:939682/1‑150 (MQ=255)
                                                                                                                        ttATCACATCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTg                           >  1:549138/1‑146 (MQ=255)
                                                                                                                            cacaTCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGattatt                  <  2:366310/151‑1 (MQ=255)
                                                                                                                            cacaTCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGattatt                  >  1:1062478/1‑151 (MQ=255)
                                                                                                                            cacaTCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGattat                   <  2:375774/150‑1 (MQ=255)
                                                                                                                             acaTCAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGattatt                  >  2:455382/1‑150 (MQ=255)
                                                                                                                                 cAGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTcccc              >  2:205473/1‑150 (MQ=255)
                                                                                                                                  aGTATGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGt            <  2:555220/151‑1 (MQ=255)
                                                                                                                                     aTGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGTAt          <  1:710701/150‑1 (MQ=255)
                                                                                                                                      tGGTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGTAt          >  2:652003/1‑149 (MQ=255)
                                                                                                                                        gTTTCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGTATCAAt      <  2:1299214/151‑1 (MQ=255)
                                                                                                                                           tCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGTATCAATgg    >  1:1195619/1‑150 (MQ=255)
                                                                                                                                           tCACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGTATCAATgg    <  1:1243988/150‑1 (MQ=255)
                                                                                                                                            cACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGGCCTGTTGATTTTTCCCCGTATCAATGGtt  >  2:810002/1‑151 (MQ=255)
                                                                                                                                            cACCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGTATCAATGGtt  <  2:809936/151‑1 (MQ=255)
                                                                                                                                             aCCTCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGGACAGGACCCGTTGATTATTCCCCGTATCCAttgat  >  2:1272283/1‑146 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
ATTGGATGAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCCCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAAAACTGCCATCCGGCTGGCGGGTGAACAGGACCTGTTGATTATTCCCCGTATCAATGGTT  >  NC_000913/4427864‑4428154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑