Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,660,4080AG44.9% 137.1 / inf 286intergenic (+19/‑6)mdtE/mdtFanaerobic multidrug efflux transporter, ArcA‑regulated/anaerobic multidrug efflux transporter, ArcA‑regulated
Reads supporting (aligned to +/- strand):  ref base A (77/80);  new base G (67/61);  total (145/141)
Fisher's exact test for biased strand distribution p-value = 6.34e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01

Only 100 of 287 total aligned reads displayed.

GGGTCGTCACCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAGCGCTACC  >  NC_000913/3660259‑3660557
                                                                                                                                                     |                                                                                                                                                     
gggTCGTCACCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGa                                                                                                                                                       <  4:669330/150‑1 (MQ=255)
   tcgtcACCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTCAGGGGGCttt                                                                                                                                                   >  1:669283/1‑151 (MQ=255)
       cACCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATg                                                                                                                                               >  4:1042078/1‑151 (MQ=255)
       cACCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATg                                                                                                                                               <  4:8835/151‑1 (MQ=255)
        aCCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATgg                                                                                                                                              >  1:258947/1‑151 (MQ=255)
              ggCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACt                                                                                                                                        <  1:527288/151‑1 (MQ=255)
               gCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTa                                                                                                                                       <  1:84395/151‑1 (MQ=255)
               gCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTa                                                                                                                                           <  3:231398/147‑1 (MQ=255)
                      ggCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTAtt                                                                                                                                >  4:1333754/1‑151 (MQ=255)
                      ggCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTAt                                                                                                                                 <  1:610181/150‑1 (MQ=255)
                         tGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGAt                                                                                                                             >  4:1827061/1‑151 (MQ=255)
                         tGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGAt                                                                                                                             >  2:262975/1‑151 (MQ=255)
                         tGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGAt                                                                                                                             >  4:262789/1‑151 (MQ=255)
                         tGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGAt                                                                                                                             >  1:1306933/1‑151 (MQ=255)
                          ggCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGa                                                                                                                              <  1:1181347/149‑1 (MQ=255)
                          ggCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGa                                                                                                                              <  4:1549537/149‑1 (MQ=255)
                          ggCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATc                                                                                                                            <  4:362697/151‑1 (MQ=255)
                              aTCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGccc                                                                                                                        <  1:713482/151‑1 (MQ=255)
                                cGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCgg                                                                                                                      <  1:128015/151‑1 (MQ=255)
                                   gTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGttt                                                                                                                   <  4:1184245/151‑1 (MQ=255)
                                    tGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGtttt                                                                                                                  >  2:471646/1‑151 (MQ=255)
                                      aTCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTg                                                                                                                >  1:334892/1‑151 (MQ=255)
                                       tagTTTCCGGTTTGCAAAGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTg                                                                                                                <  1:378757/148‑1 (MQ=255)
                                        cGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGcc                                                                                                              >  1:1476572/1‑151 (MQ=255)
                                         gTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCt                                                                                                             >  4:1303236/1‑151 (MQ=255)
                                         gTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCt                                                                                                             <  1:1863753/151‑1 (MQ=255)
                                          tttCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTg                                                                                                            >  4:1466303/1‑151 (MQ=255)
                                            tCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTggg                                                                                                          >  4:1491596/1‑151 (MQ=255)
                                              cGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGtg                                                                                                        >  1:590704/1‑150 (MQ=255)
                                               ggTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGtgc                                                                                                       >  4:1061882/1‑149 (MQ=255)
                                                   tGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTTCCTGGGTACTTGc                                                                                                   >  4:622269/1‑151 (MQ=255)
                                                    gCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGcc                                                                                                  >  2:319740/1‑151 (MQ=255)
                                                     cAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCa                                                                                                 <  1:1582413/151‑1 (MQ=255)
                                                       aCGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCatt                                                                                               <  1:129779/151‑1 (MQ=255)
                                                        cGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCatt                                                                                               >  4:1386243/1‑150 (MQ=255)
                                                             tCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTatg                                                                                         >  1:946866/1‑151 (MQ=255)
                                                              cGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTatg                                                                                         >  1:726604/1‑150 (MQ=255)
                                                                 ccGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGc                                                                                     >  3:259441/1‑151 (MQ=255)
                                                                  tgggTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGccc                                                                                                                        >  3:125446/2‑115 (MQ=255)
                                                                  tgggTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGccc                                                                                                                        <  2:125451/114‑1 (MQ=255)
                                                                  cGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCt                                                                                    >  4:1079544/1‑151 (MQ=255)
                                                                     gTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGc                                                                                 <  4:71577/151‑1 (MQ=255)
                                                                        tCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAgg                                                                              >  1:468130/1‑151 (MQ=255)
                                                                         cAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAggt                                                                             >  3:461569/1‑151 (MQ=255)
                                                                            aGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAggtggt                                                                          <  4:126567/151‑1 (MQ=255)
                                                                              cACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCt                                                                        >  4:444651/1‑151 (MQ=255)
                                                                                   gCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGa                                                                   <  4:1814526/151‑1 (MQ=255)
                                                                                   gCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCg                                                                    >  2:14500/1‑150 (MQ=255)
                                                                                    cAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGAt                                                                  >  4:919038/1‑151 (MQ=255)
                                                                                    cAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGAt                                                                  <  1:91487/151‑1 (MQ=255)
                                                                                     aaTTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGAt                                                                  <  4:1605754/150‑1 (MQ=255)
                                                                                     aaTTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATc                                                                 <  3:324930/151‑1 (MQ=255)
                                                                                      aTTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCa                                                                <  4:499518/151‑1 (MQ=255)
                                                                                         tcctccAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATg                                                              <  3:531057/150‑1 (MQ=255)
                                                                                          cctccAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGa                                                             >  1:760748/1‑150 (MQ=255)
                                                                                          cctccAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGa                                                             <  4:957106/150‑1 (MQ=255)
                                                                                          cctccAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGaa                                                            <  2:533491/151‑1 (MQ=255)
                                                                                            tccAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACt                                                          >  4:979077/1‑151 (MQ=255)
                                                                                              cagccagGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACtt                                                         >  4:106797/1‑150 (MQ=255)
                                                                                                gccagGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTAcc                                                      <  4:1121917/151‑1 (MQ=255)
                                                                                                  cagGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCgg                                                    <  3:386552/151‑1 (MQ=255)
                                                                                                     gAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTg                                                 >  4:210584/1‑151 (MQ=255)
                                                                                                           gCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGt                                           >  1:810511/1‑151 (MQ=255)
                                                                                                            ccAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTa                                          <  4:1139030/151‑1 (MQ=255)
                                                                                                             cAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTAt                                         >  4:725161/1‑151 (MQ=255)
                                                                                                             cAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTAt                                         <  1:1731536/151‑1 (MQ=255)
                                                                                                             cAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTAt                                         <  1:1252831/151‑1 (MQ=255)
                                                                                                               gCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATcc                                       >  1:1021060/1‑151 (MQ=255)
                                                                                                               gCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATcc                                       <  1:294798/151‑1 (MQ=255)
                                                                                                                 aCCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGc                                     >  1:1339446/1‑151 (MQ=255)
                                                                                                                 aCCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGc                                     <  2:220471/151‑1 (MQ=255)
                                                                                                                  ccGAATCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCa                                    <  1:451205/151‑1 (MQ=255)
                                                                                                                     aaTCGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGAt                                 <  4:324998/151‑1 (MQ=255)
                                                                                                                        cGAAACAATAACGTTGCATGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTTCCGGTTGCGCAGTATCCGCAGATTg                               <  4:30172/150‑1 (MQ=255)
                                                                                                                        cGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTg                               <  1:819322/150‑1 (MQ=255)
                                                                                                                        cGAAACAATAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCACGAACTTACCGGTTGCGCAGTATCCGCAGATTgc                              >  4:1690672/1‑151 (MQ=255)
                                                                                                                        cGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTgc                              >  1:1793059/1‑151 (MQ=255)
                                                                                                                          aaaCAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTgcgc                            <  3:78125/151‑1 (MQ=255)
                                                                                                                          aaaCAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTgcgc                            >  4:543232/1‑151 (MQ=255)
                                                                                                                           aaCAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGcc                           >  4:789376/1‑151 (MQ=255)
                                                                                                                              aaTAACGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCAcc                        >  2:536783/1‑151 (MQ=255)
                                                                                                                               aTAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCg                       >  1:637327/1‑151 (MQ=255)
                                                                                                                               aTAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCg                       >  3:377097/1‑151 (MQ=255)
                                                                                                                                   cGTTGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCa                   <  1:1826344/151‑1 (MQ=255)
                                                                                                                                     ttGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCAtt                 >  4:123591/1‑151 (MQ=255)
                                                                                                                                     ttGCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCAtt                 >  1:1149568/1‑151 (MQ=255)
                                                                                                                                       gCAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTAc               >  4:1314784/1‑151 (MQ=255)
                                                                                                                                       gCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTa                <  4:1721923/150‑1 (MQ=255)
                                                                                                                                       gCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTAc               >  3:273952/1‑151 (MQ=255)
                                                                                                                                        cAGGCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTAcc              >  2:433869/1‑151 (MQ=255)
                                                                                                                                           gCTTAAGGGGGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTc           <  1:217139/151‑1 (MQ=255)
                                                                                                                                           gCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTc           >  2:193918/1‑151 (MQ=255)
                                                                                                                                           gCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTc           <  1:1091938/151‑1 (MQ=255)
                                                                                                                                            cTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTc           >  1:1902808/1‑150 (MQ=255)
                                                                                                                                              tAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAg         <  2:379494/150‑1 (MQ=255)
                                                                                                                                                tggggGCTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAgcgc      >  1:355674/2‑151 (MQ=255)
                                                                                                                                                aGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAgcgc      >  4:104579/1‑151 (MQ=255)
                                                                                                                                                  gggACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAGCGCTa    <  4:830133/151‑1 (MQ=255)
                                                                                                                                                    gACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAGCGCTAcc  >  1:1165080/1‑151 (MQ=255)
                                                                                                                                                    gACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTGCTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAGCGCTAcc  >  4:1891471/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGGTCGTCACCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAACGTTGCAGGCTTAAGGGGACTTTCATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAGCGCTACC  >  NC_000913/3660259‑3660557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑