BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,778,196	C→T	L266L (CTC→CTT)	lldP →	L‑lactate permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,778,196	0	C	T	100.0%	464.6 / NA	118	L266L (CTC→CTT)	lldP	L‑lactate permease
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (51/67); total (51/67)

Only 100 of 118 total aligned reads displayed.

GCGCGGTATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACT  >  NC_000913/3778049‑3778342

gcgcGGTATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTaaa                                                                                                                                                 <  4:745723/151‑1 (MQ=255)

gcgcGGTATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTaa                                                                                                                                                  >  1:478919/1‑150 (MQ=255)

  gcgGTATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACg                                                                                                                                               <  2:197835/151‑1 (MQ=255)

   cgGTATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGc                                                                                                                                              >  1:379122/1‑151 (MQ=255)

      tATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTgg                                                                                                                                           >  1:409782/1‑151 (MQ=255)

        tCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTgg                                                                                                                                           >  4:658468/1‑149 (MQ=255)

        tCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGc                                                                                                                                          >  2:374252/1‑150 (MQ=255)

         cAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCa                                                                                                                                         <  4:1127840/150‑1 (MQ=255)

            agagACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGcc                                                                                                                                      >  4:301537/1‑150 (MQ=255)

            agagACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCa                                                                                                                                     <  3:29437/151‑1 (MQ=255)

              agaCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGt                                                                                                                                   <  4:738086/151‑1 (MQ=255)

              agaCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGt                                                                                                                                   <  3:84493/151‑1 (MQ=255)

              agaCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGt                                                                                                                                   <  4:1785324/151‑1 (MQ=255)

               gaCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTg                                                                                                                                  <  2:464805/151‑1 (MQ=255)

               gaCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTg                                                                                                                                  <  4:1784482/151‑1 (MQ=255)

               gaCGTGGCCTGCGGGCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCAGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTg                                                                                                                                  >  3:109311/1‑151 (MQ=255)

                aCGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGc                                                                                                                                 >  3:426599/1‑151 (MQ=255)

                 cGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGc                                                                                                                                 <  1:1832140/150‑1 (MQ=255)

                    ggCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCgtgt                                                                                                                             <  2:13884/151‑1 (MQ=255)

                     gCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCgtgt                                                                                                                             >  1:1031725/1‑150 (MQ=255)

                       cttcGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTAtt                                                                                                                          >  4:77819/4‑151 (MQ=255)

                            gTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGtt                                                                                                                     <  3:256226/151‑1 (MQ=255)

                                 gtttGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGGATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGTGTGCATTCCGtttt                                                                                                                   >  3:309372/3‑148 (MQ=255)

                                 ggTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTgg                                                                                                                 <  1:660445/150‑1 (MQ=255)

                                 ggTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGt                                                                                                                <  4:485125/151‑1 (MQ=255)

                                    tGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGa                                                                                                              <  1:1075826/150‑1 (MQ=255)

                                    tGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGAt                                                                                                             >  3:43642/1‑151 (MQ=255)

                                     gcgggcggCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGAtt                                                                                                            <  1:685176/151‑1 (MQ=255)

                                     gcgggcggCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGAt                                                                                                             <  2:258362/150‑1 (MQ=255)

                                        ggcggcTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgg                                                                                                         <  4:1850934/151‑1 (MQ=255)

                                          cggcTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTgggg                                                                                                       <  1:230787/151‑1 (MQ=255)

                                           ggcTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTggggg                                                                                                      <  4:576799/151‑1 (MQ=255)

                                               cGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGt                                                                                                   <  2:393733/150‑1 (MQ=255)

                                                    gCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAg                                                                                              <  1:54798/150‑1 (MQ=255)

                                                      cATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGtt                                                                                           <  1:750/151‑1 (MQ=255)

                                                       aTCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTg                                                                                          >  1:1684245/1‑151 (MQ=255)

                                                       aTCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTg                                                                                          <  4:1832772/151‑1 (MQ=255)

                                                        tCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTg                                                                                          >  3:428625/1‑150 (MQ=255)

                                                             cAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATg                                                                                     <  1:1126821/150‑1 (MQ=255)

                                                                tACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGc                                                                                 >  4:1416903/1‑151 (MQ=255)

                                                                  ccTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGc                                                                                 <  1:185296/149‑1 (MQ=255)

                                                                  ccTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCt                                                                                <  1:425694/150‑1 (MQ=255)

                                                                  ccTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTg                                                                               <  1:305178/151‑1 (MQ=255)

                                                                     tAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGcc                                                                            >  4:649311/1‑151 (MQ=255)

                                                                      aGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGcc                                                                            <  1:1317326/150‑1 (MQ=255)

                                                                        ctctAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCcac                                                                         >  3:422537/1‑151 (MQ=255)

                                                                         tctAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCcac                                                                         >  2:340786/1‑150 (MQ=255)

                                                                           tatcTTCATTGGGACGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTTTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCcac                                                                         <  4:1474950/145‑1 (MQ=255)

                                                                            aaCTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCcaca                                                                        <  4:1631823/148‑1 (MQ=255)

                                                                            aaCTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCg                                                                     <  1:1128765/151‑1 (MQ=255)

                                                                             aCTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCgg                                                                    >  4:1155632/1‑151 (MQ=255)

                                                                              cTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGt                                                                   >  2:153841/1‑151 (MQ=255)

                                                                                 cATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTac                                                                >  4:1493862/1‑151 (MQ=255)

                                                                                 cATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTa                                                                 <  1:807328/150‑1 (MQ=255)

                                                                                  aTTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTaca                                                               <  1:151563/151‑1 (MQ=255)

                                                                                     gggCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACt                                                             <  4:925809/150‑1 (MQ=255)

                                                                                      ggCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGc                                                           <  1:1898181/151‑1 (MQ=255)

                                                                                         cGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCggg                                                        <  4:389172/151‑1 (MQ=255)

                                                                                         cGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCggg                                                        >  1:991415/1‑151 (MQ=255)

                                                                                          ggAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGt                                                       >  1:1027887/1‑151 (MQ=255)

                                                                                          ggAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGt                                                       <  2:282574/151‑1 (MQ=255)

                                                                                              cTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAgg                                                   >  4:526838/1‑151 (MQ=255)

                                                                                               tGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAgg                                                   >  1:1303919/1‑150 (MQ=255)

                                                                                                gCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGgtg                                                 <  4:561577/151‑1 (MQ=255)

                                                                                                 ccGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGgtgt                                                <  1:1016786/151‑1 (MQ=255)

                                                                                                 ccGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGgtgt                                                >  4:1853463/1‑151 (MQ=255)

                                                                                                   ggACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTa                                              <  3:283372/151‑1 (MQ=255)

                                                                                                   ggACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTa                                              <  1:1862211/151‑1 (MQ=255)

                                                                                                       aTTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTg                                          <  4:935609/151‑1 (MQ=255)

                                                                                                           tctcTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACAGGTTACACTGCGGGTCAGGTGTTACGTGcc                                        >  4:1459368/1‑149 (MQ=255)

                                                                                                              ctTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGcca                                       <  3:25078/147‑2 (MQ=255)

                                                                                                              ctTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCt                                       <  1:1175330/147‑1 (MQ=255)

                                                                                                              ctTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCt                                       <  1:491002/147‑1 (MQ=255)

                                                                                                              ctTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTg                                      <  4:1703091/148‑1 (MQ=255)

                                                                                                                tCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGaca                                  >  4:55223/1‑150 (MQ=255)

                                                                                                                tCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGa                                    <  4:1332093/148‑1 (MQ=255)

                                                                                                                tCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGa                                    <  4:591376/148‑1 (MQ=255)

                                                                                                                 cGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACAcc                                <  4:1678129/151‑1 (MQ=255)

                                                                                                                  gCTGGTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCg                               >  4:1724041/1‑151 (MQ=255)

                                                                                                                   cTGGTATCACTGCTCTGCCTGCTGCAGTTCCTTAAACGCTGGCAGCCATTGCGTGTATTCCGGTTTGGTGATTTGGGGGCGTCACAGGATGATATGACGCTGGCCCAAACCGGTTACACTGCGGGTCAGGGGTTACGTGCCTGGACACCgt                              >  1:230739/1‑151 (MQ=255)

                                                                                                                      gTATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCgttcc                           >  1:1093147/1‑151 (MQ=255)

                                                                                                                       tATCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGGGCCTGGACACCgttcct                          >  1:1122057/1‑151 (MQ=255)

                                                                                                                        aTCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCgttcctg                         >  1:1430838/1‑151 (MQ=255)

                                                                                                                        aTCACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCgttcctg                         >  4:561933/1‑151 (MQ=255)

                                                                                                                          cACTGCTCTGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCgttcctgtt                       <  4:694191/151‑1 (MQ=255)

                                                                                                                               ctctGCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGttcctgttcctg                   >  1:168174/1‑150 (MQ=255)

                                                                                                                                   gCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACGCCGTTCCTGTTCCTGACAGc              <  2:388943/151‑1 (MQ=255)

                                                                                                                                   gCCTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGc              <  4:643860/151‑1 (MQ=255)

                                                                                                                                    ccTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCt             <  2:399264/151‑1 (MQ=255)

                                                                                                                                    ccTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCt             >  1:1586705/1‑151 (MQ=255)

                                                                                                                                    ccTGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCt             <  1:1802197/151‑1 (MQ=255)

                                                                                                                                      tGACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTAc           >  3:398815/1‑151 (MQ=255)

                                                                                                                                       gACGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTAcc          <  1:1866129/151‑1 (MQ=255)

                                                                                                                                        aCGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCg         <  4:1416047/151‑1 (MQ=255)

                                                                                                                                        aCGCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCg         >  1:1059924/1‑151 (MQ=255)

                                                                                                                                          gCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTa       <  4:1206388/151‑1 (MQ=255)

                                                                                                                                          gCTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTa       <  1:671416/151‑1 (MQ=255)

                                                                                                                                           cTGTTCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTa       >  1:340638/1‑150 (MQ=255)

                                                                                                                                               tCCTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACt  >  4:1818217/1‑151 (MQ=255)

                                                                                                                                                ccTTAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACt  <  1:1852740/150‑1 (MQ=255)

GCGCGGTATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACT  >  NC_000913/3778049‑3778342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`