Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 280,171 G→A pseudogene (192/249 nt) insX ← pseudogene, IS3 family transposase family

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913280,1710GA100.0% 668.1 / NA 162pseudogene (192/249 nt)insXpseudogene, IS3 family transposase family
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (85/77);  total (85/77)

Only 100 of 168 total aligned reads displayed.

GCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATCAACAACCTGTTTG  >  NC_000913/280023‑280318
                                                                                                                                                    |                                                                                                                                                   
gCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGacgacg                                                                                                                                                   <  2:447992/151‑1 (MQ=255)
gCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGacgacg                                                                                                                                                   >  1:1547042/1‑151 (MQ=255)
gCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGacgacg                                                                                                                                                   <  4:902059/151‑1 (MQ=255)
    aacaacAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGAtc                                                                                                                                               >  1:883531/1‑151 (MQ=255)
      caacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGAtctc                                                                                                                                             <  4:841028/151‑1 (MQ=255)
       aacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCg                                                                                                                                            >  4:325901/1‑151 (MQ=255)
        acaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCgg                                                                                                                                           <  4:98554/151‑1 (MQ=255)
          aGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGcc                                                                                                                                         <  4:1302638/151‑1 (MQ=255)
           gACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCt                                                                                                                                        >  1:957705/1‑151 (MQ=255)
              cGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAg                                                                                                                                     <  1:498475/151‑1 (MQ=255)
                agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGc                                                                                                                                    >  2:398214/1‑150 (MQ=255)
                     gACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTg                                                                                                                               >  4:449439/1‑150 (MQ=255)
                       cacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACt                                                                                                                            <  1:679973/151‑1 (MQ=255)
                        acTGAAGTTCAAAACACCGAAAGAGATAATTGAAGGGGTAGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACt                                                                                                                            >  1:641054/1‑150 (MQ=255)
                        acTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTg                                                                                                                           <  1:1157027/151‑1 (MQ=255)
                        acTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTg                                                                                                                           >  4:1163449/1‑151 (MQ=255)
                          tGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGtt                                                                                                                         >  4:1565480/1‑151 (MQ=255)
                             aGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCtt                                                                                                                      >  4:1900764/1‑151 (MQ=255)
                             aGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCtt                                                                                                                      <  4:1219801/151‑1 (MQ=255)
                                tCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTttat                                                                                                                   >  1:229562/1‑151 (MQ=255)
                                  aaaaCACCGAATGAGATACTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTTCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGTATCTCGGCCTGAGCATCTGACTGTTCTttatt                                                                                                                  >  1:1633309/1‑150 (MQ=255)
                                  aaaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTttatt                                                                                                                  >  3:528910/1‑150 (MQ=255)
                                   aaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTttatt                                                                                                                  >  1:298980/1‑149 (MQ=255)
                                    aaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGt                                                                                                               >  1:1768836/1‑151 (MQ=255)
                                    aaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGt                                                                                                               >  4:1903069/1‑151 (MQ=255)
                                     acacCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTg                                                                                                              >  1:1653813/1‑151 (MQ=255)
                                     acacCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTg                                                                                                              >  1:815076/1‑151 (MQ=255)
                                       acCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTgg                                                                                                             >  1:1358133/1‑150 (MQ=255)
                                        ccGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGgaa                                                                                                           <  1:1466135/151‑1 (MQ=255)
                                         cGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGga                                                                                                            >  2:278665/1‑149 (MQ=255)
                                           aaaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGgaaga                                                                                                         >  4:715739/1‑150 (MQ=255)
                                            aaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAAt                                                                                                       >  4:508887/1‑151 (MQ=255)
                                            aaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAAt                                                                                                       >  1:1684663/1‑151 (MQ=255)
                                             agagATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATc                                                                                                      >  1:668940/1‑151 (MQ=255)
                                                gaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCgg                                                                                                   <  2:254389/151‑1 (MQ=255)
                                                gaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCgg                                                                                                   >  4:943207/1‑151 (MQ=255)
                                                        aaaGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTAct                                                                                           >  4:1909806/1‑151 (MQ=255)
                                                          aGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTActtc                                                                                         <  1:1825078/151‑1 (MQ=255)
                                                           ggggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTActtct                                                                                        <  4:1323529/151‑1 (MQ=255)
                                                             ggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCttt                                                                                      <  4:282530/151‑1 (MQ=255)
                                                             ggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCttt                                                                                      >  4:793958/1‑151 (MQ=255)
                                                                 ttGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATc                                                                                   <  4:1406733/150‑1 (MQ=255)
                                                                   gCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCa                                                                                 <  3:299538/150‑1 (MQ=255)
                                                                   gCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAg                                                                                <  4:250537/151‑1 (MQ=255)
                                                                   gCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAg                                                                                <  4:740182/151‑1 (MQ=255)
                                                                    cATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAgg                                                                               >  1:856728/1‑151 (MQ=255)
                                                                     aTTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGc                                                                              >  4:1322019/1‑151 (MQ=255)
                                                                     aTTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGc                                                                              <  4:816758/151‑1 (MQ=255)
                                                                       tGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCAt                                                                            >  1:59528/1‑151 (MQ=255)
                                                                             aTTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGc                                                                      <  4:177095/151‑1 (MQ=255)
                                                                                gAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCtgt                                                                   <  4:1547654/151‑1 (MQ=255)
                                                                                  aTCTACAGCAGCTTTTTTTAATCTGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTGGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgg                                                                 >  1:1808417/1‑151 (MQ=255)
                                                                                  aTCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgg                                                                 >  1:1615438/1‑151 (MQ=255)
                                                                                    cTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgggt                                                               >  4:1414179/1‑151 (MQ=255)
                                                                                     tACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgggtg                                                              >  3:191323/1‑151 (MQ=255)
                                                                                     tACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgggtg                                                              >  4:765017/1‑151 (MQ=255)
                                                                                      aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAACGGCTgtgggtgg                                                             >  3:67748/1‑151 (MQ=255)
                                                                                      aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgggtgg                                                             <  1:508687/151‑1 (MQ=255)
                                                                                      aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgggtgg                                                             <  3:410192/151‑1 (MQ=255)
                                                                                      aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgggt                                                               <  1:1003659/149‑1 (MQ=255)
                                                                                      aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgg                                                                 <  3:60861/147‑1 (MQ=255)
                                                                                      aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTgtgg                                                                 <  3:32952/147‑1 (MQ=255)
                                                                                       cagcagCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGggtggt                                                            >  1:953352/1‑151 (MQ=255)
                                                                                        agcagcTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGgtggtg                                                           <  3:119280/151‑1 (MQ=255)
                                                                                               ttttttAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATc                                                      <  4:1615785/149‑1 (MQ=255)
                                                                                               ttttttAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCg                                                     <  1:378293/150‑1 (MQ=255)
                                                                                                     aaTATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACgtg                                              >  1:1831100/1‑151 (MQ=255)
                                                                                                        atGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGtt                                            <  4:1724443/150‑1 (MQ=255)
                                                                                                        atGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTg                                           <  4:34287/151‑1 (MQ=255)
                                                                                                          gTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCa                                         <  4:1357131/151‑1 (MQ=255)
                                                                                                           tCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCa                                         >  4:374292/1‑150 (MQ=255)
                                                                                                            cccGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCaa                                        <  4:1507033/150‑1 (MQ=255)
                                                                                                             ccGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACg                                      >  1:426550/1‑151 (MQ=255)
                                                                                                               gTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCt                                    >  4:1117272/1‑151 (MQ=255)
                                                                                                                ttCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTg                                   >  1:1813191/1‑151 (MQ=255)
                                                                                                                ttCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTg                                   >  3:109254/1‑151 (MQ=255)
                                                                                                                        tAACCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAAc                              >  4:1247870/1‑148 (MQ=255)
                                                                                                                         aaCCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGaa                          <  3:244809/151‑1 (MQ=255)
                                                                                                                         aaCCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGa                           >  2:537811/1‑150 (MQ=255)
                                                                                                                         aaCCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGa                           >  4:1443088/1‑150 (MQ=255)
                                                                                                                          aCCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAAt                         >  4:958232/1‑151 (MQ=255)
                                                                                                                          aCCCGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAAt                         <  1:1761013/151‑1 (MQ=255)
                                                                                                                             cGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAAc                      <  1:131675/151‑1 (MQ=255)
                                                                                                                             cGTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAAc                      >  4:1162508/1‑151 (MQ=255)
                                                                                                                              gTTTCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAAcc                     >  4:15034/1‑151 (MQ=255)
                                                                                                                                ttCAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCg                    <  1:1833546/150‑1 (MQ=255)
                                                                                                                                  cAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCgaga                 <  1:738592/151‑1 (MQ=255)
                                                                                                                                  cAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCgag                  <  2:50770/150‑1 (MQ=255)
                                                                                                                                  cAGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCgag                  <  1:21729/150‑1 (MQ=255)
                                                                                                                                   aGCTCTTTCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCg                    >  2:393223/1‑147 (MQ=255)
                                                                                                                                        tttCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATcaac            >  1:1842699/1‑150 (MQ=255)
                                                                                                                                         ttCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATcaact           <  4:299695/150‑2 (MQ=255)
                                                                                                                                         ttCTGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATcaaca           <  4:119006/150‑1 (MQ=255)
                                                                                                                                            tGGAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGACCTTCTTTATCAGGGATTAAAGGTTGTGGGGGGGGATATCGAAACGTTTTGAAAGGCTGGAAACAGATTAACGGAGATAaaaaac         >  1:74307/1‑149 (MQ=255)
                                                                                                                                             ggAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATCaacaac         <  1:1088882/148‑1 (MQ=255)
                                                                                                                                             ggAGACGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATCAACAACCt       <  2:159924/150‑1 (MQ=255)
                                                                                                                                              gagaCGACGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATCaacaac         <  4:603381/147‑1 (MQ=255)
                                                                                                                                                gacgacGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATCAACAACCTGttt   <  1:1564865/151‑1 (MQ=255)
                                                                                                                                                gacgacGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATCAACAACCTGttt   <  2:326522/151‑1 (MQ=255)
                                                                                                                                                 acgacgGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATCAACAACCTGTTTg  <  1:764688/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCTTTATTAGTGGAAGAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCGAGACGTGTTGCAACGCTGGCAACAGAATAACCGAGATCAACAACCTGTTTG  >  NC_000913/280023‑280318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑