Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 574,383 G→A intergenic (+44/+146) quuD → / ← nmpC DLP12 prophage; putative antitermination protein/DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913574,3830GA100.0% 579.1 / NA 147intergenic (+44/+146)quuD/nmpCDLP12 prophage; putative antitermination protein/DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (77/70);  total (77/70)

Only 100 of 147 total aligned reads displayed.

ATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAGACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCGTAATCAGAT  >  NC_000913/574236‑574529
                                                                                                                                                   |                                                                                                                                                  
atatCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACg                                                                                                                                                 <  3:432553/151‑1 (MQ=255)
 tatCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGc                                                                                                                                                >  1:47349/1‑151 (MQ=255)
  atCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGcc                                                                                                                                               <  4:667795/151‑1 (MQ=255)
   tCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGccc                                                                                                                                              >  1:174473/1‑151 (MQ=255)
      ggAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCa                                                                                                                                           <  2:467754/151‑1 (MQ=255)
      ggAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCa                                                                                                                                           <  1:947701/151‑1 (MQ=255)
       gAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCa                                                                                                                                           >  2:346241/1‑150 (MQ=255)
        aaaaGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCaaa                                                                                                                                         <  4:1190325/151‑1 (MQ=255)
        aaaaGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCaa                                                                                                                                          >  2:21409/1‑150 (MQ=255)
         aaaGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCaaaa                                                                                                                                        <  1:858128/151‑1 (MQ=255)
         aaaGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCaaa                                                                                                                                         >  1:1848449/1‑150 (MQ=255)
          aaGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCaaaaa                                                                                                                                       <  4:1639200/151‑1 (MQ=255)
          aaGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCaaaa                                                                                                                                        >  4:678115/1‑150 (MQ=255)
          aaGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCACCCaaaaa                                                                                                                                       <  4:592654/151‑1 (MQ=255)
                aCAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAgg                                                                                                                                 >  4:378147/1‑151 (MQ=255)
                  aGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAggg                                                                                                                                >  1:856692/1‑150 (MQ=255)
                  aGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGt                                                                                                                               >  4:564576/1‑151 (MQ=255)
                  aGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGt                                                                                                                               >  1:491037/1‑151 (MQ=255)
                   gAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTa                                                                                                                              <  4:553417/151‑1 (MQ=255)
                    aaGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTaa                                                                                                                             <  4:1878405/151‑1 (MQ=255)
                     aGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAat                                                                                                                            >  2:420716/1‑151 (MQ=255)
                      ggCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAata                                                                                                                           <  3:391843/151‑1 (MQ=255)
                         tGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAatatat                                                                                                                        >  2:176700/1‑151 (MQ=255)
                         tGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAatatat                                                                                                                        >  4:1042495/1‑151 (MQ=255)
                          gAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAatatat                                                                                                                        >  1:605330/1‑150 (MQ=255)
                          gAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAAtatata                                                                                                                       <  1:30840/151‑1 (MQ=255)
                           aGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATaa                                                                                                                      <  4:368156/151‑1 (MQ=255)
                           aGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATaa                                                                                                                      <  1:1778454/151‑1 (MQ=255)
                                  aaTTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAgg                                                                                                               <  4:706418/151‑1 (MQ=255)
                                   aTTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGt                                                                                                              >  1:919437/1‑151 (MQ=255)
                                    ttGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGtt                                                                                                             >  1:1379446/1‑151 (MQ=255)
                                     tGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGttt                                                                                                            >  4:1624724/1‑151 (MQ=255)
                                             tGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGtt                                                                                                    >  4:937898/1‑151 (MQ=255)
                                             tGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGtt                                                                                                    >  4:1902923/1‑151 (MQ=255)
                                                 aaTGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGa                                                                                                 <  1:776278/150‑1 (MQ=255)
                                                 aaTGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGa                                                                                                 <  1:1710417/150‑1 (MQ=255)
                                                  aTGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAg                                                                                               <  2:358063/151‑1 (MQ=255)
                                                      cATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCa                                                                                             >  1:1652416/1‑149 (MQ=255)
                                                       aTTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAgg                                                                                          >  4:1913473/1‑151 (MQ=255)
                                                       aTTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAgg                                                                                          <  4:1905177/151‑1 (MQ=255)
                                                        ttAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAgg                                                                                          >  4:409244/1‑150 (MQ=255)
                                                          aGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTtg                                                                                       <  1:391260/151‑1 (MQ=255)
                                                            atatCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTtgtg                                                                                     <  1:1296915/151‑1 (MQ=255)
                                                            atatCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTtgtg                                                                                     <  4:26045/151‑1 (MQ=255)
                                                             tatCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGc                                                                                    >  1:1258192/1‑151 (MQ=255)
                                                              atCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCt                                                                                   >  4:1508096/1‑151 (MQ=255)
                                                                ccGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTc                                                                                 <  4:1839056/151‑1 (MQ=255)
                                                                  ggTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTa                                                                               <  4:1508100/151‑1 (MQ=255)
                                                                       gagaTGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAgg                                                                           >  1:120735/1‑150 (MQ=255)
                                                                        agaTGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGa                                                                          >  4:823850/1‑150 (MQ=255)
                                                                        agaTGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGa                                                                          >  1:1537744/1‑150 (MQ=255)
                                                                        agaTGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGa                                                                          >  1:789919/1‑150 (MQ=255)
                                                                          aTGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAg                                                                        <  1:178918/150‑1 (MQ=255)
                                                                            ggATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTgg                                                                     <  4:1849169/151‑1 (MQ=255)
                                                                                atCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTg                                                                 >  3:450458/1‑151 (MQ=255)
                                                                                  cGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTg                                                                 >  4:1301686/1‑149 (MQ=255)
                                                                                  cGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTg                                                                 >  4:1638145/1‑149 (MQ=255)
                                                                                   gttgttAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAgg                                                              <  1:918534/151‑1 (MQ=255)
                                                                                     tgttAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAggg                                                             >  1:296135/1‑150 (MQ=255)
                                                                                      gttAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAggg                                                             >  4:832646/1‑149 (MQ=255)
                                                                                      gttAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGa                                                            <  1:1246836/150‑1 (MQ=255)
                                                                                        taataaCTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGcc                                                         >  4:1101515/1‑151 (MQ=255)
                                                                                         aataaCTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGcc                                                         >  4:12017/1‑150 (MQ=255)
                                                                                           taaCTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACt                                                      >  4:383516/1‑151 (MQ=255)
                                                                                                ctAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTatat                                                 >  4:343000/1‑151 (MQ=255)
                                                                                                 taattaatATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATg                                                >  1:1008213/1‑151 (MQ=255)
                                                                                                 taattaatATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATg                                                >  4:280815/1‑151 (MQ=255)
                                                                                                   attaatATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGtt                                              >  2:384107/1‑151 (MQ=255)
                                                                                                     taatATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGtt                                              >  4:439930/1‑149 (MQ=255)
                                                                                                       atatGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTgggg                                          <  4:1361239/151‑1 (MQ=255)
                                                                                                         atGACAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTgggg                                          >  3:331184/1‑149 (MQ=255)
                                                                                                          tGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAgg                                       >  1:988292/1‑151 (MQ=255)
                                                                                                           gCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGc                                      >  4:961948/1‑151 (MQ=255)
                                                                                                            ccAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCa                                     <  1:1087354/151‑1 (MQ=255)
                                                                                                              aaTTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCaa                                    >  1:103648/1‑150 (MQ=255)
                                                                                                               aTTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGACAACg                                  >  1:54854/1‑151 (MQ=255)
                                                                                                               aTTGTTTACTAAAAATTATTAAAAATGGGGCGTCGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAAc                                   <  4:485748/150‑1 (MQ=255)
                                                                                                                ttGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACg                                  <  4:528137/150‑1 (MQ=255)
                                                                                                                ttGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGc                                 >  2:89850/1‑151 (MQ=255)
                                                                                                                 tGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGc                                 <  1:119619/150‑1 (MQ=255)
                                                                                                                 tGTTTACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGc                                 <  4:605583/150‑1 (MQ=255)
                                                                                                                     tACTAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTccc                            >  1:599180/1‑151 (MQ=255)
                                                                                                                      aatAAAAATTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATTAAGGGTAATATATAACAGGAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGGCACTTATATGTTGGGGAGGCAACGCCTccc                            >  1:562806/3‑150 (MQ=255)
                                                                                                                         aaaaaTTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCa                         <  3:5500/150‑1 (MQ=255)
                                                                                                                         aaaaaTTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCa                         >  4:1336672/1‑150 (MQ=255)
                                                                                                                           aaaTTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAAc                       >  2:521777/1‑150 (MQ=255)
                                                                                                                           aaaTTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACa                      <  4:259910/151‑1 (MQ=255)
                                                                                                                           aaaTTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACa                      <  1:211336/151‑1 (MQ=255)
                                                                                                                            aaTTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACat                     <  4:1422602/151‑1 (MQ=255)
                                                                                                                            aaTTATTAAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACat                     <  1:1478275/151‑1 (MQ=255)
                                                                                                                              ttattaAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGTCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACatat                   <  3:446923/150‑1 (MQ=255)
                                                                                                                                  taAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCttt               >  4:1294277/1‑151 (MQ=255)
                                                                                                                                  taAAAATGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCttt               >  3:177072/1‑151 (MQ=255)
                                                                                                                                      aaTGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCg           >  1:1715469/1‑151 (MQ=255)
                                                                                                                                       aTGGGGCGTTGCAACGCCCCCCAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCGt          <  4:744243/151‑1 (MQ=255)
                                                                                                                                       aTGGGGCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCGt          <  1:1867252/151‑1 (MQ=255)
                                                                                                                                          gggCGTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCGTAAt       <  4:1430829/151‑1 (MQ=255)
                                                                                                                                              gTTGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCGTAATCAGa   <  1:1368003/151‑1 (MQ=255)
                                                                                                                                                tGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCGTAGTCAGAt  <  1:867881/150‑1 (MQ=255)
                                                                                                                                                tGAAACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCGTAATCAGAt  <  4:1071860/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
ATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAATATGCCAATTGTTTACTAAAAATTATTAAAAATGGGGCGTTGAGACGCCCCCAAAAATAAAGGGTAATATATAACAGAAGGTTTATATAGTTAGAAGCAAGGTTGTGCTTCTAAAGGAAGTGGCTTGAGGGAGCCACTTATATGTTGGGGAGGCAACGCCTCCCGCAACATATCTTTTTCGTAATCAGAT  >  NC_000913/574236‑574529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: