BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,201,206	T→C	intergenic (‑174/‑291)	xisE ← / → ymfI	e14 prophage; putative excisionase/e14 prophage; uncharacterized protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,201,206	0	T	C	100.0%	575.0 / NA	164	intergenic (‑174/‑291)	xisE/ymfI	e14 prophage; putative excisionase/e14 prophage; uncharacterized protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (94/70); total (94/70)

Only 100 of 164 total aligned reads displayed.

CTGCTTAGTCTCAGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAA  >  NC_000913/1201059‑1201352

cTGCTTAGTCTCAGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCAcc                                                                                                                                                 >  1:24459/1‑151 (MQ=255)

 tGCTTAGTCTCAGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCAcc                                                                                                                                                 >  2:76195/1‑150 (MQ=255)

     tAGTCTCAGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGaa                                                                                                                                             >  2:482846/1‑150 (MQ=255)

     tAGTCTCAGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGa                                                                                                                                              <  1:607485/149‑1 (MQ=255)

       gTCTCAGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAgg                                                                                                                                          <  3:308398/151‑1 (MQ=255)

        tctcAGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAgg                                                                                                                                          >  4:1599058/1‑150 (MQ=255)

            aGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTa                                                                                                                                      >  1:280259/1‑150 (MQ=255)

             gCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAg                                                                                                                                    <  1:1217738/151‑1 (MQ=255)

                 atCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGaa                                                                                                                                 >  1:1848870/1‑150 (MQ=255)

                 atCGACCCTGCACGGTCGGTTAGTTTCTCAACAAAACAGAGAAGAGCACCTGTGGCCACAACTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGaa                                                                                                                                 >  1:1566664/1‑150 (MQ=255)

                    gACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGaaaaaa                                                                                                                             <  1:1901733/151‑1 (MQ=255)

                    gACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGaaaaa                                                                                                                              >  1:1361543/1‑150 (MQ=255)

                    gACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGaaaaa                                                                                                                              >  3:372761/1‑150 (MQ=255)

                     aCCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAAc                                                                                                                            >  2:412064/1‑151 (MQ=255)

                       ccTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTg                                                                                                                          >  1:103609/1‑151 (MQ=255)

                        cTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTgg                                                                                                                         >  4:268320/1‑151 (MQ=255)

                        cTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTgg                                                                                                                         >  4:349652/1‑151 (MQ=255)

                          gCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGt                                                                                                                        <  4:1394234/150‑1 (MQ=255)

                            aCGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTAc                                                                                                                      >  4:932665/1‑150 (MQ=255)

                               gtcggtTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGcc                                                                                                                  >  2:322906/1‑151 (MQ=255)

                                 cggtTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCa                                                                                                                 <  1:698370/150‑1 (MQ=255)

                                   gtTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGAATGGGTCGGGTTATTAGCCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGTAAAAAACTGGTACCGCCaa                                                                                                                <  1:35507/149‑1 (MQ=255)

                                       gTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTac                                                                                                          >  2:262485/1‑151 (MQ=255)

                                         ttCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTacac                                                                                                        >  3:385018/1‑151 (MQ=255)

                                         ttCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTaca                                                                                                         <  4:451817/150‑1 (MQ=255)

                                          tctcCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTacac                                                                                                        <  1:1064380/150‑1 (MQ=255)

                                             ccACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTacacac                                                                                                      >  1:1682140/1‑149 (MQ=255)

                                             ccACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTacacac                                                                                                      <  1:492683/149‑1 (MQ=255)

                                                caAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCAt                                                                                                 >  2:118777/1‑151 (MQ=255)

                                                      agagAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGtt                                                                                           >  4:958547/1‑151 (MQ=255)

                                                      agagAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGtt                                                                                           >  1:1810579/1‑151 (MQ=255)

                                                       gagaAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGtt                                                                                           <  4:1524636/150‑1 (MQ=255)

                                                        agaagaGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTtg                                                                                          <  4:1765786/150‑1 (MQ=255)

                                                          aagaGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTtgtg                                                                                        <  1:1293746/150‑1 (MQ=255)

                                                          aagaGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTtgtg                                                                                        <  4:245320/150‑1 (MQ=255)

                                                          aagaGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTgtgg                                                                                       >  4:1377843/1‑151 (MQ=255)

                                                              gCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTc                                                                                   >  4:885531/1‑151 (MQ=255)

                                                               cACTTGTGGCCACAGATATCAGGATGGGTCGGGTTATTAACCCGTCATCGGGGTATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGATTAAGAAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGgtgt                                                                                    <  4:1534224/149‑1 (MQ=255)

                                                               cACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTc                                                                                   >  2:206114/1‑150 (MQ=255)

                                                                 ccTGTGGCCACAGCTATCATGATGGTTCGGGTTATTAACCCTTCATCCGGGTATCCGCTTCTCTGTTTAGTAAAAGGGCCGGCTACAGAAAGGACTAAGGAAAAAACGGGTACCGCCAAGACTACACACAGCATAAAGTTgtgg                                                                                       <  1:1244995/144‑1 (MQ=255)

                                                                 ccTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTACCCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCggg                                                                                <  4:738992/151‑1 (MQ=255)

                                                                 ccTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCggg                                                                                <  4:167203/151‑1 (MQ=255)

                                                                 ccTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCggg                                                                                >  4:1789684/1‑151 (MQ=255)

                                                                 ccTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCggg                                                                                <  1:1902392/151‑1 (MQ=255)

                                                                   tgtgGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTg                                                                              >  2:54469/1‑151 (MQ=255)

                                                                    gtgGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTg                                                                              <  1:1501380/150‑1 (MQ=255)

                                                                         cacaGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCg                                                                        <  4:1141493/151‑1 (MQ=255)

                                                                         cacaGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCg                                                                        >  3:248836/1‑151 (MQ=255)

                                                                           caGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGt                                                                      >  2:451271/1‑151 (MQ=255)

                                                                            aGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAACCTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGt                                                                      <  1:1714323/150‑1 (MQ=255)

                                                                            aGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTg                                                                     <  4:291295/151‑1 (MQ=255)

                                                                              cTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGcc                                                                   >  4:1693060/1‑151 (MQ=255)

                                                                                aTCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCt                                                                  <  1:539433/150‑1 (MQ=255)

                                                                                   aGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCg                                                              <  3:117761/151‑1 (MQ=255)

                                                                                    ggATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCg                                                              >  4:831654/1‑150 (MQ=255)

                                                                                       tGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAgg                                                          >  4:1171170/1‑151 (MQ=255)

                                                                                       tGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAgg                                                          >  1:212881/1‑151 (MQ=255)

                                                                                        gggTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGt                                                         >  4:1631909/1‑151 (MQ=255)

                                                                                        gggCCGGGTTATTAACATGACATACGGGGATATTCTTTTCTGTTTTGTAAAAAGGGCGGCTCCAGAAAGGACAAAGGAAAAACCTGGTACCGCCAAGACTCCCCACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGt                                                         <  4:498904/151‑1 (MQ=255)

                                                                                         gggcGGGTTATAACCCCGTCATCGGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGtt                                                        <  1:1638225/148‑1 (MQ=255)

                                                                                         ggTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGtt                                                        >  1:1131481/1‑151 (MQ=255)

                                                                                           tCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACTCAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGc                                                      >  1:1529508/1‑151 (MQ=255)

                                                                                           tCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGc                                                      >  3:484260/1‑151 (MQ=255)

                                                                                            cGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGc                                                      >  2:186919/1‑150 (MQ=255)

                                                                                            cGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGCACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGc                                                      >  4:837248/1‑150 (MQ=255)

                                                                                              ggTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGcac                                                    >  1:677414/1‑150 (MQ=255)

                                                                                                  attaACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACAcc                                                 >  2:473783/1‑149 (MQ=255)

                                                                                                   ttaACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAgg                                              >  4:1402581/1‑151 (MQ=255)

                                                                                                   ttaACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAg                                               <  1:1873500/150‑1 (MQ=255)

                                                                                                   ttaACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAg                                               <  1:1846346/150‑1 (MQ=255)

                                                                                                      aCCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCgg                                           >  4:502548/1‑151 (MQ=255)

                                                                                                        ccGTTATCCGGGGATCCTCTTCTCTGTTTTGTAAAAAGGGCGGCTCCAGAAAGGCCTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCgg                                           <  1:1288322/149‑1 (MQ=255)

                                                                                                         cGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGaa                                                            <  1:905273/131‑1 (MQ=255)

                                                                                                         cGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGaa                                                            >  4:905667/1‑131 (MQ=255)

                                                                                                           tCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCgggtggg                                      >  1:118857/1‑151 (MQ=255)

                                                                                                                  gggATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCcac                               <  1:38192/151‑1 (MQ=255)

                                                                                                                    gATACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAg                             <  4:1544502/151‑1 (MQ=255)

                                                                                                                    gATACTCTCCTCTGTTTTGTAAAAAGGGCGGCACAAGAAAGGACTAAGGAAAAAACTGGTGCCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAg                             <  1:377579/151‑1 (MQ=255)

                                                                                                                     aTACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCcac                               >  1:146919/1‑148 (MQ=255)

                                                                                                                      tACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGa                            >  1:449555/1‑150 (MQ=255)

                                                                                                                      tACTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGa                            >  3:88220/1‑150 (MQ=255)

                                                                                                                       aCTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGa                            >  1:763608/1‑149 (MQ=255)

                                                                                                                       aCTCTTCTCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAg                          <  2:448061/151‑1 (MQ=255)

                                                                                                                           ttctCTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCg                      >  4:1505403/1‑151 (MQ=255)

                                                                                                                            tctcTGTTTTGTAAAAGGGGCGACCCCAGAAAGGCCTAAGAAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTc                       <  4:371394/149‑1 (MQ=255)

                                                                                                                            tctcTGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTc                       <  1:1332666/149‑1 (MQ=255)

                                                                                                                             ctctGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGAt                    >  4:1539742/1‑151 (MQ=255)

                                                                                                                               ctGTTTTGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGAt                    <  2:251184/149‑1 (MQ=255)

                                                                                                                                  ttttGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTc                >  2:479615/1‑150 (MQ=255)

                                                                                                                                  ttttGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTc                <  1:349539/150‑1 (MQ=255)

                                                                                                                                  ttttGTAAAAAGGACGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCCCAGCAGGTCGATTGTc                >  3:48384/1‑150 (MQ=255)

                                                                                                                                   tttGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCa               <  4:1826144/150‑1 (MQ=255)

                                                                                                                                   tttGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCa               <  1:93833/150‑1 (MQ=255)

                                                                                                                                     tGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAGCTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAg              <  4:1660842/149‑1 (MQ=255)

                                                                                                                                     tGTAAAAAGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGcc            >  2:356602/1‑151 (MQ=255)

                                                                                                                                         aaaaGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCa         >  3:380334/1‑150 (MQ=255)

                                                                                                                                          aaaGGGCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAAc       >  2:372918/1‑151 (MQ=255)

                                                                                                                                             gggCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCtt    <  1:1247414/151‑1 (MQ=255)

                                                                                                                                             gggCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCtt    <  1:316950/151‑1 (MQ=255)

                                                                                                                                             gggCGGCACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCtt    >  4:129672/1‑151 (MQ=255)

CTGCTTAGTCTCAGCATATCGACCCTGCACGGTCGGTTAGTTTCTCCACAAAACAGAGAAGAGCACCTGTGGCCACAGCTATCAGGATGGGTCGGGTTATTAACCCGTCATCCGGGGATACTCTTCTCTGTTTTGTAAAAAGGGCGGTACCAGAAAGGACTAAGGAAAAAACTGGTACCGCCAAGACTACACACAGCATAAAGTTGTGGTGTCGGGTGCCCCCGGTGCCTGGCGAAGGTTGCACACCAGGCGGGTGGGTATCCACAGAAGGTCGATTGTCAGCCTCAACCTTAA  >  NC_000913/1201059‑1201352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`