BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,420,637	C→T	N91N (AAC→AAT)	ydaS →	Rac prophage; putative DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,420,637	0	C	T	100.0%	659.9 / NA	165	N91N (AAC→AAT)	ydaS	Rac prophage; putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (76/89); total (76/89)

Only 100 of 167 total aligned reads displayed.

GCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAACAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCG  >  NC_000913/1420490‑1420784

gcctgccGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATaaa                                                                                                                                                  <  4:879541/151‑1 (MQ=255)

 cctgccGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAAt                                                                                                                                                 <  2:358976/151‑1 (MQ=255)

   tgccGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATcc                                                                                                                                               >  2:547075/1‑151 (MQ=255)

    gccGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATcc                                                                                                                                               <  2:418149/150‑1 (MQ=255)

    gccGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCt                                                                                                                                              <  4:1221402/151‑1 (MQ=255)

      cGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCa                                                                                                                                            <  1:914925/151‑1 (MQ=255)

      cGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCa                                                                                                                                            <  4:1724465/151‑1 (MQ=255)

       gagagaTGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCAt                                                                                                                                           >  1:949263/1‑151 (MQ=255)

          agaTGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTg                                                                                                                                        <  3:427249/151‑1 (MQ=255)

                ccAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATa                                                                                                                                  <  1:609466/151‑1 (MQ=255)

                 cAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAAATAAATGACAGTAATAAATCCTCATTTGATCATa                                                                                                                                  <  4:930797/150‑1 (MQ=255)

                   gCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCt                                                                                                                               <  1:1898489/151‑1 (MQ=255)

                    cAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTg                                                                                                                              <  1:1658492/151‑1 (MQ=255)

                     aaTTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGa                                                                                                                             <  4:50737/151‑1 (MQ=255)

                     aaTTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGa                                                                                                                             <  1:1359272/151‑1 (MQ=255)

                      aTTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGaa                                                                                                                            <  3:544429/151‑1 (MQ=255)

                      aTTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGaa                                                                                                                            <  4:1130833/151‑1 (MQ=255)

                      aTTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGa                                                                                                                             >  1:252316/1‑150 (MQ=255)

                       ttGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGaa                                                                                                                            >  2:88546/1‑150 (MQ=255)

                          aaCGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACAt                                                                                                                        <  1:1618947/151‑1 (MQ=255)

                           aCGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATc                                                                                                                       >  4:441325/1‑151 (MQ=255)

                            cGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCa                                                                                                                      <  1:673925/151‑1 (MQ=255)

                             gTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCaa                                                                                                                     <  4:1113856/151‑1 (MQ=255)

                             gTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCa                                                                                                                      >  1:869041/1‑150 (MQ=255)

                             gTGCAACAAGAGGTCAGGTTCTGGGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTGGGCATGTTGGTCGGAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATc                                                                                                                       >  3:449865/1‑149 (MQ=255)

                               gCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCa                                                                                                                      >  1:1007466/1‑148 (MQ=255)

                               gCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAaga                                                                                                                   <  4:1025655/151‑1 (MQ=255)

                                caacaaGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAag                                                                                                                    >  1:1109621/1‑149 (MQ=255)

                                 aacaaGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAgg                                                                                                                 <  3:31628/151‑1 (MQ=255)

                                 aacaaGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAgg                                                                                                                 >  4:643099/1‑151 (MQ=255)

                                  acaaGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGc                                                                                                                >  4:184241/1‑151 (MQ=255)

                                   caaGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCa                                                                                                               <  4:1816891/151‑1 (MQ=255)

                                    aaGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCa                                                                                                               >  2:132630/1‑150 (MQ=255)

                                    aaGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCa                                                                                                               >  4:1465088/1‑150 (MQ=255)

                                                tCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGa                                                                                                   <  1:968494/150‑1 (MQ=255)

                                                   gtgCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGaaa                                                                                                 <  4:149390/149‑1 (MQ=255)

                                                      cGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCa                                                                                             >  3:511788/1‑150 (MQ=255)

                                                         agaaCTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGc                                                                                          >  1:706711/1‑150 (MQ=255)

                                                          gaaCTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCAt                                                                                        <  1:1349893/151‑1 (MQ=255)

                                                           aaCTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATg                                                                                       >  4:396546/1‑151 (MQ=255)

                                                             cTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATg                                                                                       >  1:1891995/1‑149 (MQ=255)

                                                                cGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGcac                                                                                  <  4:322628/151‑1 (MQ=255)

                                                                 gTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGcac                                                                                  >  4:196899/1‑150 (MQ=255)

                                                                 gTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGca                                                                                   >  4:1891689/1‑149 (MQ=255)

                                                                 gTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGca                                                                                   <  1:1890960/149‑1 (MQ=255)

                                                                   ccTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCGTTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATc                                                                               >  1:1162752/1‑151 (MQ=255)

                                                                    cTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATc                                                                               <  1:438259/150‑1 (MQ=255)

                                                                      gATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCg                                                                              <  1:512940/149‑1 (MQ=255)

                                                                      gATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCg                                                                              <  4:1597222/149‑1 (MQ=255)

                                                                      gATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGaa                                                                            <  4:1248883/151‑1 (MQ=255)

                                                                        tatTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATc                                                                          >  4:1529683/1‑151 (MQ=255)

                                                                         atTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATc                                                                          <  4:1806258/150‑1 (MQ=255)

                                                                         atTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATc                                                                          >  4:227527/1‑150 (MQ=255)

                                                                         atTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCa                                                                         <  4:796117/151‑1 (MQ=255)

                                                                           tGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAgt                                                                       >  4:1871190/1‑151 (MQ=255)

                                                                            gACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAgtg                                                                      <  1:441168/151‑1 (MQ=255)

                                                                             aCTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAgtgt                                                                     >  4:1632280/1‑151 (MQ=255)

                                                                             aCTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAgtgt                                                                     <  2:40216/151‑1 (MQ=255)

                                                                               tGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGtgttg                                                                   >  2:236041/1‑151 (MQ=255)

                                                                                ggTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGtgtt                                                                    <  3:416841/149‑1 (MQ=255)

                                                                                  tCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGttt                                                                >  1:314884/1‑151 (MQ=255)

                                                                                           cgacgTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTagca                                                       <  1:833648/151‑1 (MQ=255)

                                                                                            gacgTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTagcag                                                      <  1:396971/151‑1 (MQ=255)

                                                                                              cgTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGcc                                                    >  1:1524224/1‑151 (MQ=255)

                                                                                               gTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCg                                                   <  4:1799886/151‑1 (MQ=255)

                                                                                                  cGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGaa                                                 >  1:243611/1‑150 (MQ=255)

                                                                                                     cATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGaaaa                                               >  4:1173355/1‑149 (MQ=255)

                                                                                                     cATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGaaaa                                               >  2:161106/1‑149 (MQ=255)

                                                                                                      aTGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAgg                                            <  4:287041/151‑1 (MQ=255)

                                                                                                        gttgttCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGggc                                          <  4:945367/151‑1 (MQ=255)

                                                                                                            ttCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGggcaggc                                      >  3:151880/1‑151 (MQ=255)

                                                                                                            ttCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGggcaggc                                      >  2:262549/1‑151 (MQ=255)

                                                                                                             tCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGggcaggc                                      <  2:84611/150‑1 (MQ=255)

                                                                                                              cGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGggcaggca                                     <  4:1627092/150‑1 (MQ=255)

                                                                                                              cGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCAt                                    >  1:355415/1‑151 (MQ=255)

                                                                                                               gCAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATg                                   <  4:1036453/151‑1 (MQ=255)

                                                                                                                cAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATgg                                  >  4:1559302/1‑151 (MQ=255)

                                                                                                                cAGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATgg                                  >  1:1230146/1‑151 (MQ=255)

                                                                                                                 aGAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATggg                                 >  1:358634/1‑151 (MQ=255)

                                                                                                                  gAATATGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGt                                >  3:411030/1‑151 (MQ=255)

                                                                                                                       tGTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGcc                            >  3:234528/1‑150 (MQ=255)

                                                                                                                        gTCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGcc                            >  4:269653/1‑149 (MQ=255)

                                                                                                                         tCAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCaa                          >  4:526237/1‑150 (MQ=255)

                                                                                                                          cAGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAAt                         <  1:1889102/150‑1 (MQ=255)

                                                                                                                           aGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGc                       <  4:1467101/151‑1 (MQ=255)

                                                                                                                           aGTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGc                       <  4:459027/151‑1 (MQ=255)

                                                                                                                            gTGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCa                      <  4:518201/151‑1 (MQ=255)

                                                                                                                             tGAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCa                      >  1:181025/1‑150 (MQ=255)

                                                                                                                              gAAGCATCTAAATGACAGTAATTAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGACTCATGAAAATCAAGCATGAGCACAGCGAAGCAGTGTTTTTTGCCCTAGCAGCCGAAAAAGGGCCGGCATGGGTAGCCAATGCAAt                    <  3:224673/151‑1 (MQ=255)

                                                                                                                              gAAGCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCaa                     <  1:1799371/150‑1 (MQ=255)

                                                                                                                                 gCAACTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTAc                 <  4:869414/151‑1 (MQ=255)

                                                                                                                                   aaCTAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTg               <  4:1390484/151‑1 (MQ=255)

                                                                                                                                      tAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTga              >  4:1138625/1‑149 (MQ=255)

                                                                                                                                      tAAATGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTg               >  4:814542/1‑148 (MQ=255)

                                                                                                                                         aTGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAat         <  2:215972/151‑1 (MQ=255)

                                                                                                                                         aTGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAat         >  1:1153588/1‑151 (MQ=255)

                                                                                                                                          tGACAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAat         >  1:1726470/1‑150 (MQ=255)

                                                                                                                                             cAGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCt     <  4:790579/151‑1 (MQ=255)

                                                                                                                                              aGTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTg    <  1:1037440/151‑1 (MQ=255)

                                                                                                                                               gTAATAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTgc   <  2:449879/151‑1 (MQ=255)

GCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAACAAATCCTCATTTGATCATACCTGAAACATCAAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCG  >  NC_000913/1420490‑1420784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`