Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,261,842 | 0 | T | G | 39.6% | 273.0 / 31.3 | 141 | T12P (ACC→CCC) | prs | phosphoribosylpyrophosphate synthase |
Reads supporting (aligned to +/- strand): ref base T (14/70); new base G (55/0); total (71/70) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.77e-26 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 144 total aligned reads displayed.
GCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACA > NC_000913/1261694‑1261990 | cacaAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGc < 4:249909/151‑1 (MQ=255) aGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑Gtt > 3:213936/1‑150 (MQ=255) gTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGGAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTa > 3:592770/1‑150 (MQ=255) gTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTAc < 2:930970/151‑1 (MQ=255) ggACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCa < 2:626969/151‑1 (MQ=255) gACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAg < 2:1445664/151‑1 (MQ=255) cTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCCGGGGGGC‑GCTAcc > 3:148336/1‑147 (MQ=255) tGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GGTACCAGCa > 2:1212141/1‑150 (MQ=255) ggATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTACCAGCaa > 3:415871/1‑150 (MQ=255) atgatgAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCaaaaa < 1:456094/151‑1 (MQ=255) atgatgAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCaaaaa < 2:1542057/151‑1 (MQ=255) tgatgaAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGGAAAACC‑GTTTGCTAGTTCCGGGGGGGG‑GTTTCCCGCaaaaa > 1:18401/1‑150 (MQ=255) tgatgaAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGGTAGTTCCCGGGCGGG‑GGTACCCGCaaaaa > 2:670774/1‑150 (MQ=255) gatgaAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCaaaaa > 2:1408536/1‑149 (MQ=255) atgaAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAAAACG‑CTGTGCTTGGTCCGGGGGGGC‑GTTATCAGCaaaaa > 4:258866/1‑148 (MQ=255) gaAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCtt < 1:1007180/150‑1 (MQ=255) aaaaTATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GGTACCAGCaaaaaaatt > 2:1512177/1‑145 (MQ=255) aaaaTATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GGTACCAGCAAAAAGCtt > 1:637904/1‑149 (MQ=255) aaTATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCata < 2:625288/151‑1 (MQ=255) tatCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGATGGCAATAAG‑TTGTGCTAGTTCCGGGGGGGG‑GTTACCAGCAAAAAGCTTCATATc > 1:374730/1‑151 (MQ=255) caccacCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCCATTCC‑TTGTGCTAGTTCCCGGGGGGC‑GTTACCAGCAAAAACCTTCATATCa > 1:263361/1‑149 (MQ=255) ccaccGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCa < 2:1644724/151‑1 (MQ=255) cgcgTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACgag < 3:427304/151‑1 (MQ=255) cgTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCATAACC‑TTCTGCTAGTTTCCGGGGGGC‑GGTTCCAACAAAAAGCTTCATATCAAGCAc > 1:1209091/1‑146 (MQ=255) gTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGagaa < 4:353301/150‑1 (MQ=255) aCATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTTGGAATACG‑CTGTGCTAGTTCCCGGGGGGC‑GGTACCAGCAAAAAAATTCCTATCAGGCACGagaa > 1:1307563/1‑148 (MQ=255) aCATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAgaagaa < 2:881117/151‑1 (MQ=255) aTTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTTGCAATACGTTTGGGTAATTTCCGGGGGGGC‑‑TTTCCCGCAAAAAGCATCTTATCCggga > 2:944662/1‑138 (MQ=255) tttCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCt < 1:1133134/150‑1 (MQ=255) cATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAg < 1:1017772/150‑1 (MQ=255) cATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAgg > 3:155772/1‑151 (MQ=255) aTTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAgg > 2:1626778/1‑150 (MQ=255) aTTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAAAACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAAACTCAgg > 1:868791/1‑150 (MQ=255) ttAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GGTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCCCAgg > 3:212907/1‑149 (MQ=255) aaTTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATg < 3:66774/151‑1 (MQ=255) aaTTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATg < 1:418618/151‑1 (MQ=255) aaTTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GCTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATg > 1:644919/1‑151 (MQ=255) aTTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGGTGGGAATACG‑TTGTGCTCGTTCCGGGGGGGC‑GGTACCAGCAAAAAGCTTCATATCAGGCACGGGAAGAAcc > 1:734981/1‑141 (MQ=255) tttGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGGGCTAGTTTCGGGGGGGC‑GGTACCAACAAAAAGCTTCATATCAAGGCCGAGAAGAAACCCAAGCATg > 1:501009/1‑149 (MQ=255) tACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGCGTGCAGTGTACAGGCGGTTTGCAATAAG‑TTGTGCTAGATCCTGGGGGGT‑GTTACTAACAAAAAGCATCTTACTAAGCACGCGACGAACCTCCGGctag > 1:1498783/1‑142 (MQ=255) tACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTTGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAAACTCAGGCATGCGTcc > 1:1640518/1‑150 (MQ=255) aCGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCa < 3:394168/150‑1 (MQ=255) gCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTTGGAATACG‑TTGTGCTAGGTCCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCAtt > 2:170936/1‑150 (MQ=255) gCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑GTGTGCTAGTTCCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCCCAGGCATGCGCCCAtt > 4:153978/1‑150 (MQ=255) tGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGG‑GGTACCAGCAAAAAACTTCATATCAGGCACGAGAAGAAACTCAGGCATGCGTCCAtttg > 1:97024/1‑148 (MQ=255) tGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAAACTCAGGCATGCGTCCATtg > 2:297444/1‑149 (MQ=255) tGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCCGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCCGGGACGAGAAGAACCTCAGGCATGCGTCCATtggt > 2:438051/1‑151 (MQ=255) gACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATtgg < 1:1249579/149‑1 (MQ=255) gACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGGTTGGAAAACC‑GTGTGCTAGTTTCGGGGGGGCGGTTTCCGGAAAAAAGC‑TCATATAAAGGCCCAGGAGAAACTCAGGCATGCGCCCACtgg > 2:133811/1‑149 (MQ=255) cTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAAAACC‑TTGTGCTAGTTCCGGGGGGGC‑GGTACCAGCAAAAAGCTTCATATCAGGGACGAGAAGAAACTCCGGCAAGCGGCCATtggtgg > 4:141656/1‑150 (MQ=255) cGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGGAAAACG‑TTGTGCTAGTTCCGGGGGGGC‑GGTACCAGCAAAAAGCTTCATATTAGGCACGAGAAGAACCTCAGGCATGCGTCCCTTTGGGGaaa > 1:1353311/1‑150 (MQ=255) gCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGa < 1:253765/151‑1 (MQ=255) cATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAAt < 1:133785/151‑1 (MQ=255) tCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑GTGTGCTAGTTCCGGGGTGGG‑GTTACCCGCCAAAAACTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGa > 2:224363/1‑147 (MQ=255) cGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCt < 4:457960/150‑1 (MQ=255) gCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGG‑GGTACCAGCAAAAAGCCTCCTATCAGGCACGCGAAGAACCCCCGGCATGCGTCCATTGGTGGAAAGAATCTg > 4:500485/1‑150 (MQ=255) tAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCCTTGGTGGAAAGAATCTGcc > 2:177518/1‑150 (MQ=255) aaGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGaa < 2:1723149/151‑1 (MQ=255) aGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTTCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAAACTCAGGCATGCGTCCCTTGGTGGGAAGAATCTGCCGaa > 2:916779/1‑150 (MQ=255) gccaCCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGGAATAAC‑TTGTTCTAGTTCCGGGGGGGC‑GTTACCAGCAAAAAGCCTCATATCCGGAACGAGAAGAAACTCCAGCATGAGGCCCCTGGAGGAAAAAAtacgccccaa > 1:1467228/4‑141 (MQ=255) gCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGGAATAAG‑TTGTGCTAATTCCGGGGGGGG‑GGTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCCCAGGCATGCGTCCCTTGGTGGAAAGAATCTGCCGaaa > 4:541497/1‑150 (MQ=255) aCCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GGTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAAACTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGaaaa > 2:487966/1‑148 (MQ=255) ccTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACtgt > 2:995909/1‑151 (MQ=255) cAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCgg < 1:156004/151‑1 (MQ=255) aGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCgg < 2:80721/150‑1 (MQ=255) gcggcgTCGCCGAGTGAAGTGTACAGGCGGTTGGGAATAAG‑GTGTGCTAGTTCCGGGGGGGC‑GTTTCCAGCAAAAAGCTTCATATCAGGCACGAGGAGAAACTCCGGCATGCGTCCATTGGTGGAAAGAAACTGCTGGAAAATGTGCggg > 1:1705919/1‑150 (MQ=255) cggcgTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑GTGTGCTAGTTCCGGGGGGGC‑GGTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAAACTCAGGCAAGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGcc > 2:367425/1‑151 (MQ=255) cgTCGCCGAGTGAAGTGTACAGGCGGTTTGCAAAACA‑TTTTGCTAGTTTCGGGGGGGC‑GGTACCAACAAAAAGCTTCATATCAGGCACGGGAAAAACCTCAGGGATGCGGCCATTGGTGGAAAGAAACTGCCGAAAACTGTGCggggc > 1:783625/1‑146 (MQ=255) gTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGc < 2:77293/151‑1 (MQ=255) gTCGCCGAGTGAAGTGTACAGGCGGATGGCAAAACG‑TTTGGGTTGTTCCCGGGGGGG‑GTTCCCCACAAAAAAGTTCCTATCCGGGCCGGAGAGAACCCCAGGCACGCGTCCCTTTGGGGGAAAAAAATGGCGAAAACTTTGCGGGGCAgg > 2:1529044/1‑150 (MQ=255) gCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGG‑GGTACCAGCAAAAAACTTCCTATCAGGCACGAGAAGAAACTCAGGCATGCGTCCATTGGTGGAAAAAATCTGCCGAAAACTGTGCGGGCCAGGCATg > 1:1714582/1‑151 (MQ=255) ccGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATg < 2:676043/150‑1 (MQ=255) ccGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGa < 3:485799/151‑1 (MQ=255) cGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGAt < 1:671724/151‑1 (MQ=255) gAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCttt < 3:414664/151‑1 (MQ=255) gAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCttt < 2:703682/151‑1 (MQ=255) gAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCtt < 4:398495/150‑1 (MQ=255) gAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGGGGC‑GTTAACCGCCAAAAACTTCATATTAAGCACCGGAAAAAACTCAAGCATGCGGTCATTTGGGGGAAAAAACTTCCGGAAAATGTTCCGGCCCGGCATGATCCttt > 1:945965/1‑151 (MQ=255) aGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTcc < 3:378389/151‑1 (MQ=255) tgtACAGGCGGTTGGGAATACG‑GTGTGCTAGGTCCGGGGGGGG‑GTTAACAGCAAAAAGCTTCATATCAGGGACGAGAAGAAACTCAGGGATGCGGCCATTGGGGGGAAGAATATGCCGAAAACTGTGCGGGCCCGGCATGATACttttccg > 1:181697/1‑147 (MQ=255) aCAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGc < 2:1693992/150‑1 (MQ=255) cAGGCGGTTGGCAATTCG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGTATGCCTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCg > 1:706717/1‑150 (MQ=255) cGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTa < 2:248808/151‑1 (MQ=255) ggCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTaaa < 2:328109/151‑1 (MQ=255) gCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAag < 2:1591255/151‑1 (MQ=255) aaTACT‑TTGTGCTATTTCCTGGGTGGC‑GTGACCAGCAAACAGCTTCATATCAGTCACGAGAAGAACCTCAGGCATGCTACCATTGGTGGAAAGAATCTGCCCAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAagag < 1:547602/151‑1 (MQ=255) aTACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAgc > 1:101080/1‑151 (MQ=255) aTACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAgc < 4:571296/151‑1 (MQ=255) aCG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTAATAAAGAgcgc < 1:479315/151‑1 (MQ=255) gtgCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATg < 1:1720091/150‑1 (MQ=255) tAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACg > 1:1160047/1‑151 (MQ=255) aGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAAc < 2:1448793/149‑1 (MQ=255) aGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGt > 1:1445662/1‑151 (MQ=255) gTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTc < 2:1406000/151‑1 (MQ=255) tCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTg > 2:1623842/1‑151 (MQ=255) tCCGGGGTAGC‑GTTACGAGTAAAAAGCTTCAGATCAGGCACGAGAAGAACCTCAGGCGTGCGTGCATTGGTTGAAAGAAACTGACAAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCt < 4:288760/150‑1 (MQ=255) ccGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTgg < 2:141698/151‑1 (MQ=255) cGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTgg > 1:1673944/1‑150 (MQ=255) ggggTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGa > 1:413848/1‑150 (MQ=255) tGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACa > 3:508766/1‑149 (MQ=255) | GCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACG‑TTGTGCTAGTTCCGGGGTGGC‑GTTACCAGCAAAAAGCTTCATATCAGGCACGAGAAGAACCTCAGGCATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTGCGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACA > NC_000913/1261694‑1261990 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |