| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,350,844 | 0 | A | C | 39.8% | 174.0 / 12.5 | 93 | L728V (TTA→GTA) | arcB | aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB |
| Reads supporting (aligned to +/- strand): ref base A (43/13); new base C (0/37); total (43/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.52e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCG > NC_000913/3350696‑3350990 | ttAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAAcc > 1:161736/1‑151 (MQ=255) tAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAAccc > 3:80110/1‑151 (MQ=255) aGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAAcccc < 2:227293/151‑1 (MQ=255) tGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCAc > 3:496604/1‑151 (MQ=255) ggCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCAc < 2:328829/150‑1 (MQ=255) gCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTg < 1:1521164/151‑1 (MQ=255) ttttGACACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGa > 1:140784/1‑150 (MQ=255) tGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGAcccc > 2:394332/1‑151 (MQ=255) gCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGAcccc < 2:778904/150‑1 (MQ=255) ccacccacGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCccgc > 2:587016/1‑151 (MQ=255) cacccacGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCccgcc < 1:314768/151‑1 (MQ=255) cacccacGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCccgcc > 1:505080/1‑151 (MQ=255) cacccacGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCccgcc > 1:938956/1‑151 (MQ=255) cTTCCAGCACTTCTCCGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATCCCCCGCCGTTATCTCCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑TTGTTGCAGATGGCGTACCCCCCCTGACCCCGCCGCACCtt < 1:12133/150‑1 (MQ=255) tttCAGCACTTCTACGTCGGGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCttt > 1:649510/1‑150 (MQ=255) cAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAAtt > 3:512591/1‑151 (MQ=255) cAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAAtt > 2:591158/1‑151 (MQ=255) cccTTCTCCGTCGTCACGCCCCTTTTCTTTCATCTCTTCAACCCATCCCCCGACGTTTTCTTCCCAGGCCGGAAGGTCA‑GGACACTAATTTTGCTGACCCGG‑CTGTGGCAGTTGGTGTACCCCCACAGCCCCCGCCGCACCTTTa < 1:246180/143‑1 (MQ=255) catttCTCCGTCGTCACCCCCCTTTTCTTCCATCTCTCCAACCCATCCCCCGACTTTATCTTCCAAGGCGGGAGGGTCA‑GGAGACGAAATTGCCTGCCCCAT‑TTTTTGAAGAGGGCGAAACCCCACGCACCCCGCCGCACCTTTAATTTTa < 4:297437/148‑1 (MQ=255) cACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAAtttt > 2:978019/1‑150 (MQ=255) cgtcgtGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGtccttc > 1:76435/1‑151 (MQ=255) cgggACCCCCCTCTTTTTTCATCTCTTCAACCCATCCCCCGCCTTTATCTCCCCGGGCCGGAAGGTCA‑GGAGACTAAATTTGCTG‑CCCAGTTTTTTGAAGAGGGCGTACCCCCACGGCCCCCGCCGCACCTTTAATTTTa < 1:736517/137‑1 (MQ=255) gccccccctctTCTTTCATCTCTTCAATCCATCCCCCGCCTTTATCTCCCCAGGCCGGAAGGTCA‑GGAGACTGATTTTGCTGACCCAG‑CTTTTGCAGATGGCGAAACCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTca < 4:346051/142‑1 (MQ=255) cGCCACTCTTCTTTCATCTCTTAAATCCATCCCCCGACTTTATCTCCCCAGGCCGGAAGGTCA‑GGAGACTAAATTTGCTGACCCAG‑CTTTTGCAGAGGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGtccttcct < 2:766811/145‑1 (MQ=255) cccctctTCTTTCATCTCTTCAACCCATCCCCCGACGTTATCTCCCAAGGCGGGAAGGTGA‑GGAGACTAAATTGGCTGACCAAG‑CTGTTGAAGATGGCGTACCCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAAt < 2:404967/147‑1 (MQ=255) ccctctTCTTTCATCTCTTCAACCCATCCCCCGACTTTATCTCCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCGGCCCCAG‑CTGTTGCAGATGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATg < 1:1521771/148‑1 (MQ=255) ccctctTCTTCCATCCCTTCAACCCATCCCCCGATGTTATCTTCCCGGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGCCCCAG‑TTTTTGCAGATGGCGTACCCCCCCGGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGc < 1:586933/149‑1 (MQ=255) aCTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGcc > 1:1086914/1‑151 (MQ=255) tcttctTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtt > 1:423051/1‑151 (MQ=255) cttcttTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttt > 2:1560776/1‑151 (MQ=255) ttttttCACCTCTTCAATCCATTCCCCGACTTTATCTCCCCAGGCGGGAGGGTGA‑GGAGCCTGATTTTCCTGACCCAG‑CTGTTGAAGATGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttt < 2:299076/147‑1 (MQ=255) tcttTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttttt > 1:1702106/1‑151 (MQ=255) tttCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtttttt > 2:1063980/1‑150 (MQ=255) tttCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtttttt > 1:802857/1‑150 (MQ=255) ttcattctctcCAACCCCTCCCCCGAATTTTTCTTCCCGGGGGGGAGGGACA‑GGAGATTGAATTGCCGGACCCGT‑GTTTTGCAGGGGGCCCACCCCCACGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttt < 1:897257/142‑1 (MQ=255) ttCATCTCTTCAACCCATCCCCCGACGTTATCTCCCCAGGCCGGAAGGTCA‑GGAGACTGATTTTGCTGCCCCAG‑CTGTTGCAGATGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttttt < 2:717469/148‑1 (MQ=255) tctcTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCAGCACCTTTAATTTTATGTCCTTCCTCAACAATGCATTTTTTATCCt > 1:67142/1‑150 (MQ=255) ctctTCAATCAATCCCCCGACTTTATCTTCCCGGGCGGGAAGGTCA‑GGAGAATGATTTTGCTGCCCTAG‑TTTTTGCAGAGGGCGTACCCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTAt < 1:492005/146‑1 (MQ=255) ctacAACCCATCCCCCGACGTTATCTCCCCAGGCCGGAAGGTCA‑GGAGACTAAATTTGCTGACCCAG‑CTTTTGCAGAGGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTg < 4:48330/145‑1 (MQ=255) ccacaacccctcccccGACGTTTTTTCCCCAGCCGGGAGGGCAA‑GAACAGTAAATTTGCTCACCAAG‑TTTTTGGAGAGGGCGTAACCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTg < 1:1266247/134‑1 (MQ=255) ttCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGcc > 2:1619601/1‑151 (MQ=255) aaTCCATTCCCCCACGTTATCTCCCCAGGCCGGAAGGTAA‑GGAAACTAAATTGCCTCCCCATG‑TTTTTGCGGGTGGCTAACCCCCTCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCg < 1:658659/149‑1 (MQ=255) aaTCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTc > 2:967090/1‑151 (MQ=255) ccATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTc > 4:16383/1‑148 (MQ=255) ccccccccctttttATCTCCCCAGGCGGGAAGCTCA‑GGAGACTGATTTTCCAAACCCAG‑TTGTTGATGAGGGAGAACCCCCATTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGAt < 1:581636/139‑1 (MQ=255) atcccccGACGTTATCTTCCCGGCCGGGAAGGTAA‑GGAGACTGATTTTGCTGACCCAG‑TTGTTGCAGATGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGAt < 2:215129/145‑1 (MQ=255) atccACCGATGTTATCTCCCAAGGCCGAAGGATAA‑GATGATGAAATTGGCTGACCCAG‑CTTTTGAAGATGGCTTAACCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCa < 1:428699/144‑1 (MQ=255) cACCGACTTTTTCTCCCCAGGCCGAAGGGCCA‑GGAGACTAATTTTGTTGACCCAG‑CTTTTGAAGAGGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGa < 1:115400/151‑1 (MQ=255) cGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTc > 2:1296092/1‑151 (MQ=255) gACGTTATCTCCCCGGGCGGGAAGGTCA‑GAAGCCTGATTGTGCTCCCCCAG‑TGTTTGAAGAGGGCGTACCCCCTCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTcc < 1:1605813/151‑1 (MQ=255) actttATCTCCCGAGGCTGG‑AGGCCAGGGACACTGATTTTGCTGCCCCCG‑CTGTGGCGGAGGGGTTACCCCCTCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACt < 2:109326/145‑1 (MQ=255) aCGTTATCTCCCCAGGCCGGAAGGTAA‑GGAGACTAATTTGGCTGACCCAG‑CTGTTGCAGATGGCTTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTcc < 2:270793/150‑1 (MQ=255) ttATCTCCCCAGGCGGGAAGGTCA‑GGAGACTGAATTTGCTGCCCCTT‑TTGTTGAAGTGGGCTAAACCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCa < 1:561509/148‑1 (MQ=255) tATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCAc > 1:737210/1‑151 (MQ=255) cTTCCCATTCCGGAAGGACA‑GCAGACGCAATTTGCTGACACAG‑CTGTTGCAGATGGCGTAACCCCGCTGACCCCCCCGCACCTTTAATTTTATGTCCTTCCTCATCAATGCCTTTTTTATCCTGCGCAGTCAGATTCCACTCGTGCAc > 1:312885/1‑148 (MQ=255) cccGGGCGGGAAGGTCA‑GGAGACTGAATTTGCTGCCCCAG‑TTGTTGCAGATGGCGTACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGAc < 2:1529468/151‑1 (MQ=255) cAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACAt > 2:1283233/1‑151 (MQ=255) gCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGc > 2:739315/1‑151 (MQ=255) ccGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGcc > 2:256185/1‑151 (MQ=255) cGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGccc > 2:167014/1‑151 (MQ=255) ggAGGGTCA‑GGGGACTAAATTTGCTGCCCCTG‑CTGTTGCAGTTGCCTTACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGccc < 1:102991/150‑1 (MQ=255) ggAGGGTCA‑GGAGACTGAATTTGCTGACCCAG‑TTGTTGCAGATGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGccc < 1:1520339/150‑1 (MQ=255) ggAAGGTCG‑GGAGCCTGATTTTGCGCCCCCGG‑CTGTTGCGGAGGGCGAACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAg < 1:354922/147‑1 (MQ=255) ggAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCg > 2:724567/1‑151 (MQ=255) aaGGTCA‑GGAGACTAAATTTGCTGCCCCAG‑CTTTTGCAGATGGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCgg < 3:197716/150‑1 (MQ=255) aaGGCCA‑GGAGACAAATTTTGCTGCCCCAG‑CTGTTGCAGAGGGCTTACCCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGc < 1:776180/151‑1 (MQ=255) ggTCG‑GGAGAGGGATTTTGCTAACCCCG‑CTTTTGCAGGGGTCGGACCCCCCGGCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGca < 2:1271681/150‑1 (MQ=255) ggTCA‑GGAGACTGATTTGGCTGACCCAG‑TTTTTGCAGATGGCGAACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGcat < 1:1263094/151‑1 (MQ=255) gaagaCTAATTTTGCTCACCCAG‑TTTTTGAAGAGGGCTTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGcatc < 1:1000783/145‑1 (MQ=255) agaCTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCAtcttc > 3:435692/1‑151 (MQ=255) agaCTAATTTTGCTGACCTGG‑TTTTTGCAGATGGCATACCCCCCCTACCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGcatcat < 1:617316/147‑1 (MQ=255) gAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCaa > 2:383458/1‑150 (MQ=255) aaTTTGCTCACCCAG‑TTTTTGCAGGTGGCTCACCCCCCCCCACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCaaa < 4:480764/150‑1 (MQ=255) ttggCTGCCCCAG‑GTTTTGCAGAGGGCGTACCCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCa < 1:148976/143‑1 (MQ=255) ttGCTGACCCAG‑CTTTTTCAGAGGGCGTAACCCCCCTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCGCGCTGACATAGCCCGGCATCATCTTCTCAAaca < 2:667508/149‑1 (MQ=255) tGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCg > 2:931121/1‑151 (MQ=255) tGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCt > 4:9397/1‑150 (MQ=255) gccccgtcTGTTGCAGAGGGCATACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCg < 1:1657232/140‑1 (MQ=255) ccccAG‑CTGTTGCAGATGGCGTAACCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAAc < 3:57859/150‑1 (MQ=255) cccAG‑TTGTTGCAGATGGCGTAACCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTa < 4:496588/148‑1 (MQ=255) tGTTGCAGATGGCTAACCCCCACGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGt < 1:189925/148‑1 (MQ=255) tGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCgg > 1:1063129/1‑151 (MQ=255) tGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTCCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCgg > 2:418558/1‑151 (MQ=255) ttGCAGGTGACGAACCCCCCCGCACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCGTCTCAAACGCCGCTAACCCGTCgg < 1:1412392/149‑1 (MQ=255) ttGAAGATGGCTTACCCCCCCTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGt < 2:1489612/150‑1 (MQ=255) tgaggcgggCGTACCCCCCCCGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTg < 1:427038/143‑1 (MQ=255) tGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTg > 1:665066/1‑150 (MQ=255) aGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATc > 2:548854/1‑150 (MQ=255) gATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATc > 3:309372/1‑149 (MQ=255) tGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCt > 1:281682/1‑151 (MQ=255) gCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTc > 1:1052336/1‑151 (MQ=255) gCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGGCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTc > 2:1569102/1‑151 (MQ=255) cGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCg < 2:823564/151‑1 (MQ=255) | TTAGTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCA‑GGAGACTGAATTTGCTGACCCAG‑CTGTTGCAGATGGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCG > NC_000913/3350696‑3350990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |