Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,662,633 G→A A740A (GCG→GCA)  mdtF → anaerobic multidrug efflux transporter, ArcA‑regulated

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,662,6330GA100.0% 474.6 / NA 123A740A (GCG→GCA) mdtFanaerobic multidrug efflux transporter, ArcA‑regulated
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (52/71);  total (52/71)

Only 100 of 123 total aligned reads displayed.

AAAAACTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCAATGGTATGTA  >  NC_000913/3662485‑3662780
                                                                                                                                                    |                                                                                                                                                   
aaaaaCTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACt                                                                                                                                                   <  2:925369/151‑1 (MQ=255)
    aCTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCt                                                                                                                                               <  1:670450/151‑1 (MQ=255)
    aCTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCt                                                                                                                                               >  1:1632087/1‑151 (MQ=255)
      tAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTg                                                                                                                                              >  2:119562/1‑150 (MQ=255)
      tAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTg                                                                                                                                              >  2:1696030/1‑150 (MQ=255)
        aCCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGat                                                                                                                                            >  2:1717246/1‑150 (MQ=255)
         cccAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGatat                                                                                                                                          <  1:253154/151‑1 (MQ=255)
           cAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATc                                                                                                                                         >  3:582794/1‑150 (MQ=255)
           cAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCa                                                                                                                                        <  1:741887/151‑1 (MQ=255)
            aGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCa                                                                                                                                        >  1:147208/1‑150 (MQ=255)
            aGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCa                                                                                                                                        >  4:250119/1‑150 (MQ=255)
              gcgcGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAAcc                                                                                                                                     >  1:1472798/1‑151 (MQ=255)
                 cgAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAAcc                                                                                                                                     >  1:1510879/1‑148 (MQ=255)
                 cgAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGa                                                                                                                                  <  3:59336/151‑1 (MQ=255)
                 cgAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGa                                                                                                                                  <  2:1129828/151‑1 (MQ=255)
                  gAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGAc                                                                                                                                 >  1:1180367/1‑151 (MQ=255)
                   aaaCGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGAc                                                                                                                                 >  3:344167/1‑150 (MQ=255)
                   aaaCGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGAc                                                                                                                                 >  1:110077/1‑150 (MQ=255)
                    aaCGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACa                                                                                                                                >  3:443170/1‑150 (MQ=255)
                      cGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAAtt                                                                                                                             <  4:352215/151‑1 (MQ=255)
                         gCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCACGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTcc                                                                                                                          <  2:1466866/151‑1 (MQ=255)
                            gTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCAcc                                                                                                                       <  1:454230/151‑1 (MQ=255)
                               gttcgggacAGCGCCATCACCGAATAACGTGACCGGGGTAGGGTCGAACGGCCTGGAAGATACGCCGATGTTAAAAAAGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACAAGAAAATTTCCACCGcc                                                                                                                    >  1:1268860/9‑151 (MQ=255)
                               aTCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGcc                                                                                                                    >  1:840405/1‑151 (MQ=255)
                                  aCTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCt                                                                                                                   >  1:557533/1‑149 (MQ=255)
                                  aCTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTc                                                                                                                 <  1:400429/151‑1 (MQ=255)
                                     ggCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCgg                                                                                                               <  2:542804/150‑1 (MQ=255)
                                        aGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAGCGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGgcagc                                                                                                           <  1:1283029/151‑1 (MQ=255)
                                         gcgcAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGgcagca                                                                                                          <  2:1128045/151‑1 (MQ=255)
                                         gcgcAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGgcagc                                                                                                           >  1:1699016/1‑150 (MQ=255)
                                           gcAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCagcagc                                                                                                        <  1:1353892/151‑1 (MQ=255)
                                            cAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCt                                                                                                       >  4:517697/1‑151 (MQ=255)
                                             aaTCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCt                                                                                                       >  4:570270/1‑150 (MQ=255)
                                             aaTCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTa                                                                                                      <  2:1435567/151‑1 (MQ=255)
                                                cACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACg                                                                                                    <  4:326509/150‑1 (MQ=255)
                                                cACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGt                                                                                                   <  2:395465/151‑1 (MQ=255)
                                                 aCCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTg                                                                                                  >  1:782401/1‑151 (MQ=255)
                                                 aCCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTg                                                                                                  <  4:494860/151‑1 (MQ=255)
                                                   cGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGa                                                                                                 >  2:1077453/1‑150 (MQ=255)
                                                     aaTCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACg                                                                                              <  3:371704/151‑1 (MQ=255)
                                                          ggTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTc                                                                                         >  2:1680431/1‑151 (MQ=255)
                                                           gTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTcc                                                                                        <  4:130960/151‑1 (MQ=255)
                                                             cACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTc                                                                                      <  3:306995/151‑1 (MQ=255)
                                                              aCCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTc                                                                                      >  2:270848/1‑150 (MQ=255)
                                                               ccGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCaa                                                                                    <  2:464903/151‑1 (MQ=255)
                                                               ccGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCa                                                                                     <  1:581790/150‑1 (MQ=255)
                                                                cGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAAc                                                                                   >  4:303735/1‑151 (MQ=255)
                                                                  gggTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCa                                                                                 <  1:1209575/151‑1 (MQ=255)
                                                                  gggTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCa                                                                                 <  1:1664066/151‑1 (MQ=255)
                                                                    gTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAgg                                                                               <  2:26049/151‑1 (MQ=255)
                                                                       cGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGc                                                                            <  1:31424/151‑1 (MQ=255)
                                                                       cGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGc                                                                            >  2:641163/1‑151 (MQ=255)
                                                                        gCCCGAACGGCCTGGAAGATACACCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCg                                                                           >  2:1367442/1‑151 (MQ=255)
                                                                         cccGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCgg                                                                          >  3:14776/1‑151 (MQ=255)
                                                                         cccGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCgg                                                                          >  1:679981/1‑151 (MQ=255)
                                                                           cGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGt                                                                        <  1:850850/151‑1 (MQ=255)
                                                                            gAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTg                                                                       <  2:224036/151‑1 (MQ=255)
                                                                                ggCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGaaaa                                                                   <  3:341024/151‑1 (MQ=255)
                                                                                     ggAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAgt                                                               <  1:1243728/150‑1 (MQ=255)
                                                                                         gATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATg                                                          <  1:1065304/151‑1 (MQ=255)
                                                                                            aCGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTcc                                                       <  4:480340/151‑1 (MQ=255)
                                                                                             cGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCca                                                      <  4:279337/151‑1 (MQ=255)
                                                                                             cGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCca                                                      <  2:718742/151‑1 (MQ=255)
                                                                                              gCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCcag                                                     <  2:678909/151‑1 (MQ=255)
                                                                                               ccGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACATCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCcagg                                                    <  3:439429/151‑1 (MQ=255)
                                                                                                  aTGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCcaggc                                                   >  1:1657495/1‑149 (MQ=255)
                                                                                                    gTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCaggcaggc                                               <  1:1446458/151‑1 (MQ=255)
                                                                                                    gTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCaggcaggc                                               <  2:1427928/151‑1 (MQ=255)
                                                                                                     ttCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCaggcaggc                                               >  3:226893/1‑150 (MQ=255)
                                                                                                      tCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAggcaggca                                              <  2:1085765/150‑1 (MQ=255)
                                                                                                       cAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACg                                            <  4:401388/151‑1 (MQ=255)
                                                                                                       cAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGCGTATGTCcaggc                                                   >  1:1654248/1‑144 (MQ=255)
                                                                                                       cAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGGCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGCAAAAAGAGTATGTCCaggcaggcc                                              >  4:399925/1‑148 (MQ=255)
                                                                                                              aaCGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTcc                                     <  3:259208/151‑1 (MQ=255)
                                                                                                               aCGTCAACGCTGCGAAAGCTGAAGCGATGGTCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCGACCAGGGGCGGGTGGAAAAAGTGTATGTCCAGGCAGGGACGCCGGTcc                                     >  1:1450347/1‑150 (MQ=255)
                                                                                                                 gTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGGGAAAAAAGGGTATGTCCAGGCAGGCACGCCGTTCCGt                                   >  1:1157511/1‑150 (MQ=255)
                                                                                                                  tCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCcaggcag                                                 <  3:299498/135‑1 (MQ=255)
                                                                                                                  tCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCcaggcag                                                 >  4:299480/1‑135 (MQ=255)
                                                                                                                  tCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCg                                    >  1:1517126/1‑148 (MQ=255)
                                                                                                                  tCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTAt                                 >  2:1026262/1‑151 (MQ=255)
                                                                                                                  tCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGGGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTa                                  >  1:987609/1‑150 (MQ=255)
                                                                                                                   cAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATg                                <  4:558718/151‑1 (MQ=255)
                                                                                                                    aaCGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGt                               >  3:105684/1‑151 (MQ=255)
                                                                                                                      cGCTGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTg                             <  1:433234/151‑1 (MQ=255)
                                                                                                                         tGCGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGcc                           >  2:534134/1‑150 (MQ=255)
                                                                                                                           cGAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCgg                         >  3:312050/1‑150 (MQ=255)
                                                                                                                            gAAAGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGAt                       <  2:1648594/151‑1 (MQ=255)
                                                                                                                               aGCTGAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATaa                     >  2:504458/1‑150 (MQ=255)
                                                                                                                                   gAAGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCa                <  1:1486688/151‑1 (MQ=255)
                                                                                                                                   gAAGCGATGGGCGTGGCACTGGCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTTAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCa                <  1:877899/151‑1 (MQ=255)
                                                                                                                                     aGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAAc              <  4:154169/151‑1 (MQ=255)
                                                                                                                                     aGCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGGGAAAAAAGGGTATGTCCAGGCGGGCACGCCGTTCCGTATGGTGCCGGATAAcaacaa               >  1:738554/1‑150 (MQ=255)
                                                                                                                                     aGCGATGGGCGTGGCACGGTCTGATATCAACCAGACAATTTCCGCCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCATCCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCTGTATGTTGCCGGATAACATCAAc              <  1:86189/151‑1 (MQ=255)
                                                                                                                                      gCGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAAcc             <  2:1191570/151‑1 (MQ=255)
                                                                                                                                       cGATGGGCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCa            <  1:1695864/151‑1 (MQ=255)
                                                                                                                                            ggCGTGGCACTGTCTGATATCAACCAGACAATTTCCACCTCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCAATGGt       <  2:236405/151‑1 (MQ=255)
                                                                                                                                              cGTGGCACTTTCTGATATCAACCAGACAATTTCCACCGCTTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTTTATGTCCAGGCGGGCACGCCTTTCCGTATGTTGCCGGATAACATCAACCAATGGTAt     <  1:96662/151‑1 (MQ=255)
                                                                                                                                               gTGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCAATGGTa      <  3:432183/149‑1 (MQ=255)
                                                                                                                                                tGGCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCAATGGTATg    >  2:1010801/1‑150 (MQ=255)
                                                                                                                                                 ggCACTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGTTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCAATGGTATGTa  <  1:778148/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AAAAACTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCAATGGTATGTA  >  NC_000913/3662485‑3662780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑