| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,302,141 | T→C | E313G (GAG→GGG) | mdtO ← | membrane translocase (MDR) of MdtNOP efflux pump, PET family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,302,141 | 0 | T | C | 98.7% | 543.4 / ‑3.5 | 153 | E313G (GAG→GGG) | mdtO | membrane translocase (MDR) of MdtNOP efflux pump, PET family |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (63/88); total (64/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
AAACAGGCGAGCAGCGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCTCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCA > NC_000913/4301994‑4302287 | aaaCAGGCGAGCAGCGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTcccc > 2:67620/1‑150 (MQ=255)aaaCAGGCGAGCAGCGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCa < 1:219642/151‑1 (MQ=255) aaCAGGCGAGCAGCGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTcccc > 2:1138358/1‑149 (MQ=255) aGGCGAGCAGCGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGtt < 4:586988/151‑1 (MQ=255) ggCGAGCAGCGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTa < 2:299473/151‑1 (MQ=255) ggCGAGCAGCGGTTTTACCGCGGAACGCATATAGTCTGGATTGGTAAAAGCATCGGCGGGCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGCCCCAGTTGTAGCAACGTCTGGCAGATATTCCCCAgg < 1:1258050/148‑1 (MQ=255) cGAGCAGCGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTAc > 2:378714/1‑150 (MQ=255) cagcGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTcc < 2:1622731/151‑1 (MQ=255) agcGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTccc > 2:601039/1‑151 (MQ=255) cGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGt < 2:1638330/151‑1 (MQ=255) cGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGt > 1:793748/1‑151 (MQ=255) gTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTg < 1:200749/151‑1 (MQ=255) gTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTg > 2:1220019/1‑151 (MQ=255) gTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTg > 1:836927/1‑151 (MQ=255) tttttACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTgc > 4:191161/1‑151 (MQ=255) ttttACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCTCCAGGTTACATTCCCGTgcc > 1:1297710/1‑151 (MQ=255) ttttACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTgcc > 2:739629/1‑151 (MQ=255) ttttACCGCGTAGCGCATATACTCTGGATTGGTAAAAGCATCCGCGGCCATTGATGGCGGCTTGGCTGCGGGCGTTGGCGGCGCATTTGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTgcc > 1:979004/1‑151 (MQ=255) ttACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTgccg < 4:437168/150‑1 (MQ=255) tACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTgccgcc > 3:421449/1‑151 (MQ=255) tACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTgccgc < 1:967498/150‑1 (MQ=255) aCCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTgccgcc > 1:1720457/1‑150 (MQ=255) ccGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCa > 2:1311455/1‑150 (MQ=255) ccGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGCTTCGCTGCAGGCGTTGGCGGCGCATTCGTGTCCATCTGACCCAGTTTTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCa > 1:507813/1‑150 (MQ=255) cgcgTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCCGTTGTAACAACGTCTGGCAGATATTCCCCAGCTTACATTCCCGTGCCGCCATc < 1:691307/151‑1 (MQ=255) cgcgTAGCACATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATGGATGGCGTTTTGGCTGCGGGCGGTGGCGGCGTATTCGGGGCCGTCTGGCCCAGTTGTAACAACGTCTGGCAGGTATTCCCGATGTTACATGCCCGTGCCGCGATc < 1:70089/151‑1 (MQ=255) tAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTAATCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCtt > 2:1487536/1‑151 (MQ=255) atatAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCttcacttt > 1:740142/1‑151 (MQ=255) gTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTg > 1:1049662/1‑151 (MQ=255) gTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTg > 3:78995/1‑151 (MQ=255) gTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTg < 1:997921/151‑1 (MQ=255) cTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGAt > 2:389701/1‑151 (MQ=255) ggATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGAt < 4:34353/149‑1 (MQ=255) gATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATcc > 2:136980/1‑150 (MQ=255) gATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCg < 4:296878/151‑1 (MQ=255) gATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCg < 1:372187/151‑1 (MQ=255) gATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCg < 4:20789/151‑1 (MQ=255) tGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGcc < 2:385683/150‑1 (MQ=255) ggTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGcc > 2:767541/1‑149 (MQ=255) ggTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCa < 1:468469/150‑1 (MQ=255) ggTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAg < 2:1478834/151‑1 (MQ=255) aaaaGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGGTGGAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCAACGCTTCACGTTCAATGAGCCGCCAGTCg > 1:430619/1‑151 (MQ=255) aTCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGc < 2:133459/151‑1 (MQ=255) cggcggCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCa < 2:105465/151‑1 (MQ=255) cggcggCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCa < 2:1737728/151‑1 (MQ=255) ggcggcCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGcc > 2:1292292/1‑149 (MQ=255) aTTGATGGCGGTTTGGCTGCGGGCGTTGGGGGCGTATTAGGGTCCATATGACCCAGTTGTAACAACGTCTGGGAGATATTCCCCAGGGTAAATTCCCGGGCCGCCATCGGTTCACTTTCCATGAGCCGCCAGGCGCTTTGCCAGCACTGa > 1:81068/1‑150 (MQ=255) gATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCtt < 1:1294342/151‑1 (MQ=255) aTGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCGCTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTc < 2:672967/151‑1 (MQ=255) cGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGc > 1:596804/1‑150 (MQ=255) ggTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCa > 1:474355/1‑150 (MQ=255) gTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAAc < 2:168147/151‑1 (MQ=255) ggCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGc < 3:356507/150‑1 (MQ=255) gctgctGGCGTGGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGAGCCGCCAGGCGCTTTGCCAGCACTGCCCTTCAGCAACgg < 1:1109450/148‑1 (MQ=255) gCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCAt > 3:42043/1‑151 (MQ=255) tGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACACAGTTGTAACAACGTCTGGCAGATAGTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCAtgc > 4:256673/1‑151 (MQ=255) gCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCAtg < 3:183229/149‑1 (MQ=255) ggCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCa < 1:1150763/151‑1 (MQ=255) gTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCt > 4:386490/1‑151 (MQ=255) gTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCt < 1:629387/151‑1 (MQ=255) gTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCt > 1:377774/1‑151 (MQ=255) ggcggcGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCttgt > 2:77952/1‑151 (MQ=255) ggcggcGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCttg < 1:1267561/150‑1 (MQ=255) ggcgTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCttgttg > 1:28116/1‑150 (MQ=255) ggcgTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGa < 1:1328581/151‑1 (MQ=255) cgTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGAt < 1:833519/150‑1 (MQ=255) tATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTc > 2:1119488/1‑151 (MQ=255) aTTCGGGTTCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCt < 2:619327/151‑1 (MQ=255) aTTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCt > 2:1200354/1‑151 (MQ=255) aTTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCt > 1:1516096/1‑151 (MQ=255) aTTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCt > 1:1428620/1‑151 (MQ=255) tCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTg < 3:257821/150‑1 (MQ=255) cGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGaa < 1:165335/151‑1 (MQ=255) ccATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTaa < 2:396220/151‑1 (MQ=255) tGACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAAttttt > 2:86482/1‑151 (MQ=255) gACCCAGTTGTAACAACGTCTTGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGACGCTAAtt < 1:1353012/147‑1 (MQ=255) gACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAAttttt < 2:1393198/150‑1 (MQ=255) gACCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAAtttt < 1:1033688/149‑1 (MQ=255) aCCCAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGt < 1:811844/151‑1 (MQ=255) cccAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTc > 1:1342974/1‑151 (MQ=255) ccAGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCg < 3:3333/151‑1 (MQ=255) aGTTGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGa < 1:259176/151‑1 (MQ=255) ttGTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAAt > 1:1651067/1‑151 (MQ=255) gTAACAACGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAAtt < 2:1049790/150‑1 (MQ=255) aacaccGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCaa < 1:1147695/151‑1 (MQ=255) aacaacGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCaa < 2:740251/151‑1 (MQ=255) aacaacGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCaa < 1:547063/151‑1 (MQ=255) aacaacGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCa < 1:1517692/150‑1 (MQ=255) acGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCaataat < 1:1449030/151‑1 (MQ=255) acGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCaataat < 2:503491/151‑1 (MQ=255) cGTCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAAtt < 1:777880/151‑1 (MQ=255) tCTGGCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGc > 1:185792/1‑151 (MQ=255) ggCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGc < 1:1114001/148‑1 (MQ=255) gCAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTga < 1:176189/151‑1 (MQ=255) cAGATATTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTgag < 2:461939/151‑1 (MQ=255) gATATTCCCCAGGTTACATTCCGGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTgaga < 4:570030/150‑1 (MQ=255) atTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATc > 2:87986/1‑150 (MQ=255) atTCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCa < 2:661435/151‑1 (MQ=255) atTCCCCAGGGTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCATGAGAATc > 2:835576/1‑150 (MQ=255) ttCCCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATc > 2:57307/1‑149 (MQ=255) | AAACAGGCGAGCAGCGTTTTTACCGCGTAGCGCATATAGTCTGGATTGGTAAAAGCATCGGCGGCCATTGATGGCGGTTTGGCTGCGGGCGTTGGCGGCGTATTCGGGTCCATCTGACCCAGTTGTAACAACGTCTGGCAGATATTCTCCAGGTTACATTCCCGTGCCGCCATCGCTTCACTTTCACTGATCCGCCAGTCGCTTTGCCAGCACTGACCTTCAGCAACGGCATGCTGCAGCTTGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCA > NC_000913/4301994‑4302287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |