BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,203,225	C→T	intergenic (+1/‑43)	croE → / → ymfL	e14 prophage; putative DNA‑binding transcriptional regulator/e14 prophage; putative DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,203,225	0	C	T	100.0%	569.1 / NA	146	intergenic (+1/‑43)	croE/ymfL	e14 prophage; putative DNA‑binding transcriptional regulator/e14 prophage; putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (72/74); total (72/74)

Only 100 of 149 total aligned reads displayed.

AAAAGTTGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGCAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAGCGGCTGAC  >  NC_000913/1203077‑1203372

aaaaGTTGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATtagtag                                                                                                                                                   <  4:277965/151‑1 (MQ=255)

aaaaGTTGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATtagtag                                                                                                                                                   <  2:1155657/151‑1 (MQ=255)

  aaGTTGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGa                                                                                                                                                  >  2:630468/1‑150 (MQ=255)

  aaGTTGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGAAATCTATCCGAAAGATTAGTAGa                                                                                                                                                  >  1:786288/1‑150 (MQ=255)

     ttGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAacac                                                                                                                                              >  1:1547073/1‑151 (MQ=255)

       ggCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAacacat                                                                                                                                            <  4:497245/151‑3 (MQ=255)

         cTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACttt                                                                                                                                           >  1:1588072/1‑150 (MQ=255)

           cAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTc                                                                                                                                          <  2:646214/149‑1 (MQ=255)

           cAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCa                                                                                                                                         <  2:1467765/150‑1 (MQ=255)

           cAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCa                                                                                                                                         >  1:1399272/1‑150 (MQ=255)

            aaCACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAAt                                                                                                                                       >  2:54462/1‑151 (MQ=255)

             acacCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAAtt                                                                                                                                      >  3:564098/1‑151 (MQ=255)

              cacCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAAttt                                                                                                                                     <  2:1310069/151‑1 (MQ=255)

               acCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAAtttt                                                                                                                                    >  3:39299/1‑151 (MQ=255)

               acCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAAtttt                                                                                                                                    <  2:639564/151‑1 (MQ=255)

                ccTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAAttttt                                                                                                                                   <  2:1213116/151‑1 (MQ=255)

                   ggCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTaa                                                                                                                                 <  2:797467/150‑1 (MQ=255)

                    gCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAAcc                                                                                                                               <  2:813223/151‑1 (MQ=255)

                      tACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACcac                                                                                                                             >  2:417072/1‑151 (MQ=255)

                       aCTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACcac                                                                                                                             <  3:297301/150‑1 (MQ=255)

                       aCTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACcac                                                                                                                             <  1:710387/150‑1 (MQ=255)

                           aCGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAAc                                                                                                                        <  4:72880/151‑1 (MQ=255)

                           aCGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAAc                                                                                                                        <  3:172801/151‑1 (MQ=255)

                               cTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATg                                                                                                                    >  1:1181902/1‑151 (MQ=255)

                                 ggTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATg                                                                                                                    <  1:952602/149‑1 (MQ=255)

                                 ggTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGa                                                                                                                   <  1:339795/150‑1 (MQ=255)

                                   ttttCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGc                                                                                                                >  2:1740017/1‑151 (MQ=255)

                                     ttCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCt                                                                                                               >  2:270165/1‑150 (MQ=255)

                                     ttCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCt                                                                                                               <  1:481625/150‑1 (MQ=255)

                                        aaTGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATc                                                                                                           >  1:641018/1‑151 (MQ=255)

                                               ataAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTggg                                                                                                      <  2:758108/149‑1 (MQ=255)

                                                 aaaaaaGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTa                                                                                                    >  3:427835/1‑149 (MQ=255)

                                                  aaaaaGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGc                                                                                                 <  1:1642595/151‑1 (MQ=255)

                                                  aaaaaGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGc                                                                                                 <  2:1223567/151‑1 (MQ=255)

                                                   aaaaGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGc                                                                                                 >  3:76747/1‑150 (MQ=255)

                                                     aaGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATc                                                                                              <  2:539858/151‑1 (MQ=255)

                                                     aaGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATc                                                                                              >  4:190164/1‑151 (MQ=255)

                                                      aGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATAGCTATCCGAAAGATTAGTAGAACACATTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCa                                                                                             <  1:1101749/151‑1 (MQ=255)

                                                            ttttGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGa                                                                                        >  1:1150102/1‑150 (MQ=255)

                                                             tttGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGaa                                                                                       <  4:492144/150‑1 (MQ=255)

                                                              ttGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGaaa                                                                                      >  4:316495/1‑150 (MQ=255)

                                                                gtgCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAAt                                                                                    <  1:339182/150‑1 (MQ=255)

                                                                  gCTGGCTAAAAAACTTGAGCAATACCCATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTGTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAg                                                                                  <  1:742111/150‑1 (MQ=255)

                                                                  gCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAAt                                                                                    >  4:39960/1‑148 (MQ=255)

                                                                     ggCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGaa                                                                                <  2:341987/149‑1 (MQ=255)

                                                                     ggCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGaa                                                                                <  1:1256594/149‑1 (MQ=255)

                                                                     ggCTAAAAAACTTGAGCAATACACATCAGGCGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGaaa                                                                               <  2:1518317/150‑1 (MQ=255)

                                                                        tAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAAc                                                                            >  1:1007659/1‑150 (MQ=255)

                                                                         aaaaaaCTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACa                                                                           <  2:1678339/150‑1 (MQ=255)

                                                                          aaaaaCTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGc                                                                         >  3:466087/1‑151 (MQ=255)

                                                                            aaaCTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCt                                                                       <  1:1681617/151‑1 (MQ=255)

                                                                              aCTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTg                                                                      >  2:148922/1‑150 (MQ=255)

                                                                              aCTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTg                                                                      >  3:436378/1‑150 (MQ=255)

                                                                                  gAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTgg                                                                 <  2:1439999/151‑1 (MQ=255)

                                                                                    gCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTa                                                               <  4:307045/151‑1 (MQ=255)

                                                                                         acacATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTg                                                           <  2:1510453/150‑1 (MQ=255)

                                                                                         acacATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGa                                                          <  1:212848/151‑1 (MQ=255)

                                                                                          cacaTCAGGTGCATTTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGa                                                          >  1:1719567/1‑150 (MQ=255)

                                                                                             aTCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGc                                                      <  2:766079/151‑1 (MQ=255)

                                                                                               cAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTg                                                    <  4:10138/151‑1 (MQ=255)

                                                                                                aGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGt                                                   >  2:1155090/1‑151 (MQ=255)

                                                                                                aGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGt                                                   <  1:589719/151‑1 (MQ=255)

                                                                                                  gTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCa                                                 <  2:1442820/151‑1 (MQ=255)

                                                                                                   tGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTc                                                  >  1:64724/1‑149 (MQ=255)

                                                                                                      aaTTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGaa                                              >  2:581291/1‑150 (MQ=255)

                                                                                                      aaTTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGaa                                              >  2:1351779/1‑150 (MQ=255)

                                                                                                      aaTTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGaa                                              >  1:1250885/1‑150 (MQ=255)

                                                                                                       aTTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAAAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGaaa                                             >  3:208793/1‑150 (MQ=255)

                                                                                                        ttACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGaaaa                                            >  1:898808/1‑150 (MQ=255)

                                                                                                         tACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGTCTAATCGTGGGTAAGCATCACTAGAAACTAGAAAAACAGCCTGAGTGGTACGTTAAAGCTGTCAGAAAAAc                                          >  1:1078370/1‑151 (MQ=255)

                                                                                                         tACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAAc                                          >  4:433402/1‑151 (MQ=255)

                                                                                                          aCGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACt                                         >  2:973252/1‑151 (MQ=255)

                                                                                                            gAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTAt                                       >  1:357482/1‑151 (MQ=255)

                                                                                                             aaaTCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATc                                      <  2:1585627/151‑1 (MQ=255)

                                                                                                                tCTGACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATcgcg                                   >  1:1066991/1‑151 (MQ=255)

                                                                                                                   gACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATcgc                                    <  3:286821/147‑1 (MQ=255)

                                                                                                                   gACTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCgcgg                                  <  2:1602867/149‑1 (MQ=255)

                                                                                                                    aCTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGt                               >  3:226519/1‑151 (MQ=255)

                                                                                                                    aCTTAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGt                               >  1:839311/1‑151 (MQ=255)

                                                                                                                      ttAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTg                             >  2:40342/1‑151 (MQ=255)

                                                                                                                      ttAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTg                             >  1:871287/1‑151 (MQ=255)

                                                                                                                       tAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTg                             <  3:395547/150‑1 (MQ=255)

                                                                                                                       tAAGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTg                             <  2:1588234/150‑1 (MQ=255)

                                                                                                                        aaGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGcc                           >  3:125924/1‑151 (MQ=255)

                                                                                                                        aaGACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGcc                           >  1:1637292/1‑151 (MQ=255)

                                                                                                                          gACCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGa                         <  2:1041762/151‑1 (MQ=255)

                                                                                                                           aCCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAg                        <  1:1420316/151‑1 (MQ=255)

                                                                                                                           aCCGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAg                        <  2:182645/151‑1 (MQ=255)

                                                                                                                             cGGATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTg                      >  1:111104/1‑151 (MQ=255)

                                                                                                                              ggATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTgg                     >  2:967712/1‑151 (MQ=255)

                                                                                                                               gATATCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGt                    >  2:306864/1‑151 (MQ=255)

                                                                                                                                atatCTATCCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGtt                   >  1:282593/1‑151 (MQ=255)

                                                                                                                                      atcCGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTg             >  4:198824/1‑151 (MQ=255)

                                                                                                                                         cGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGa            >  1:993416/1‑149 (MQ=255)

                                                                                                                                         cGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAg          <  1:417004/151‑1 (MQ=255)

                                                                                                                                         cGAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAg          <  4:66780/151‑1 (MQ=255)

                                                                                                                                          gAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAGc         <  2:1667466/151‑1 (MQ=255)

                                                                                                                                          gAAAGATTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAGc         >  2:256438/1‑151 (MQ=255)

                                                                                                                                               aTTAGTAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAGCGGCTg    >  4:278454/1‑151 (MQ=255)

                                                                                                                                                 tagtagAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAGCGGCTGAc  >  1:926907/1‑151 (MQ=255)

AAAAGTTGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAGCAGAACACTTTCAATTTTTAACCACAGAACGATGAGGCTAATCGTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAGCGGCTGAC  >  NC_000913/1203077‑1203372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`