| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,631,501 | C→T | pseudogene (785/1284 nt) | ydfJ ← | pseudogene, MFS transporter family; interrupted by Qin prophage;Phage or Prophage Related; putative transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,631,501 | 0 | C | T | 99.2% | 507.7 / NA | 132 | pseudogene (785/1284 nt) | ydfJ | pseudogene, MFS transporter family; interrupted by Qin prophage;Phage or Prophage Related; putative transport protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (57/74); minor base G (1/0); total (58/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 132 total aligned reads displayed.
TAATGGTGCTCGGGGCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGCCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTGCCAGCCAGAAGGATT > NC_000913/1631355‑1631648 | tAATGGTGCTCGGGGCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCg > 1:576398/1‑149 (MQ=255) aTGGTGCTCGGGGCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGaa < 1:232070/151‑1 (MQ=255) aTGGTGCTCGGGGCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGaa < 1:898103/151‑1 (MQ=255) gTGCTCGGGGCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATca < 1:539729/151‑2 (MQ=255) gTGCTCGGGGCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCg > 1:638634/1‑151 (MQ=255) cGGGGCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTg > 1:556269/1‑151 (MQ=255) ggggCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTg > 1:257144/1‑150 (MQ=255) ggCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGatc < 1:1139424/151‑1 (MQ=255) gCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGatca < 1:179821/151‑1 (MQ=255) cATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGatcat < 3:15034/151‑1 (MQ=255) aTAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGatcatc > 1:1546716/1‑151 (MQ=255) aGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCaa < 2:1235380/151‑1 (MQ=255) gCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAAt < 2:1001837/151‑1 (MQ=255) ttATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATTCa < 1:1442712/150‑1 (MQ=255) tCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTg > 3:177997/1‑151 (MQ=255) tCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTg > 2:923211/1‑151 (MQ=255) aCAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTg < 2:1128548/148‑1 (MQ=255) aaTGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTgg > 1:1140892/1‑150 (MQ=255) aaTGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGa < 4:453702/151‑1 (MQ=255) tGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAAt > 1:1391306/1‑151 (MQ=255) tGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAAt > 1:407721/1‑151 (MQ=255) aTAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTg < 4:232225/151‑1 (MQ=255) aaGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTg < 2:1421622/151‑1 (MQ=255) aGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGt > 2:634413/1‑151 (MQ=255) cATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGtt > 3:40235/1‑150 (MQ=255) aTTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTaa < 4:518068/151‑1 (MQ=255) aTTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTaa < 2:1664788/151‑1 (MQ=255) aTTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTa > 3:140464/1‑150 (MQ=255) tGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTaaa < 4:398904/150‑1 (MQ=255) ggCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACa < 2:448368/151‑1 (MQ=255) ccATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAAt < 2:1714583/151‑1 (MQ=255) ccATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAAt > 1:910948/1‑151 (MQ=255) cATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAAt > 1:863554/1‑150 (MQ=255) aTGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATaa < 2:466591/151‑1 (MQ=255) cAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTc < 2:1023458/151‑1 (MQ=255) gCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTg < 2:638724/151‑1 (MQ=255) cacaATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGc > 4:187548/1‑151 (MQ=255) aaTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt > 2:582759/1‑151 (MQ=255) aaTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt < 2:301506/151‑1 (MQ=255) aaTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt > 2:1474044/1‑151 (MQ=255) aaTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt < 3:326269/151‑1 (MQ=255) aaTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt < 1:1269954/151‑1 (MQ=255) aaTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt > 1:1280925/1‑151 (MQ=255) aaTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt < 1:266860/151‑1 (MQ=255) aTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt > 2:413783/1‑150 (MQ=255) aTCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACt > 2:1412381/1‑150 (MQ=255) gcgGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAAt < 3:334953/151‑1 (MQ=255) gcgGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAAt > 2:201947/1‑151 (MQ=255) cgGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAAt > 1:530871/1‑150 (MQ=255) cgGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATa < 2:1678145/151‑1 (MQ=255) ggAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAg < 2:317962/151‑1 (MQ=255) gAGGTATTCATAATAATATACGGCATCCGGCGACCAATGTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACGGATCACCAATGCATCTGTTGGAATTGCTGTGTTAAACAATAAGGGCTGCACTAAATat < 1:762175/150‑2 (MQ=255) ggTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCt < 3:81146/151‑1 (MQ=255) ggTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCt < 4:422285/151‑1 (MQ=255) tATTCATAATAATATACGGGGTGCGGGGACAAATTTTATCGGATAACCAACCAAGGAACGTAATGGACATAAAGTCGAGAATCGAAATGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCAATAAATAGCCtac > 1:304492/1‑149 (MQ=255) aTTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGc < 3:443253/150‑1 (MQ=255) aTTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGc > 2:241431/1‑150 (MQ=255) aTTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCa < 2:877352/151‑1 (MQ=255) ataataataTACGGGGTCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGa < 4:504155/151‑1 (MQ=255) ataataataTACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGa < 3:14072/151‑1 (MQ=255) ataCGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTg > 2:562065/1‑150 (MQ=255) ataCGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTg < 4:476414/150‑1 (MQ=255) taCGCGGTCCGGCGACCAATTTTATCGGCTAACCAACCAAGCAACGGAGTGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGATACACAATAACGTGTGCACTAAATATCCTGCAAGGAAAGTCt > 1:1581825/1‑148 (MQ=255) ggATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTa < 1:1005259/150‑1 (MQ=255) tCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAAccc > 4:125510/1‑151 (MQ=255) ccGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCg < 3:97111/151‑1 (MQ=255) ccGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCg > 2:399049/1‑151 (MQ=255) cGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCgg < 1:170934/151‑1 (MQ=255) gACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGtt > 4:218799/1‑151 (MQ=255) gACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGtt < 2:63384/151‑1 (MQ=255) ccAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTAc > 4:47935/1‑151 (MQ=255) ccAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTAc > 1:1281197/1‑151 (MQ=255) aTTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCg < 1:937314/151‑1 (MQ=255) ttATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGcc < 1:450998/150‑1 (MQ=255) ttATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCt > 2:743321/1‑151 (MQ=255) ttATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCt > 1:175553/1‑151 (MQ=255) ttATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCt > 2:194818/1‑151 (MQ=255) ttCGGATAACCAACCAAGAAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCTATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGACTGAATTAACCCGGAGTTACCCGCCTg > 1:1488860/2‑150 (MQ=255) aTCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTg > 4:530402/1‑150 (MQ=255) aTCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTg < 2:1663385/150‑1 (MQ=255) aTCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTg > 2:1023870/1‑150 (MQ=255) aTCGGATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGa < 2:1317066/151‑1 (MQ=255) ggATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATNCNTNNNTTGGAATTGCTTTGTTAAACNATNNNNNNNGCACTAAATNNCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCa < 2:810397/151‑1 (MQ=255) ggATAACCAACCAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCa < 1:879278/151‑1 (MQ=255) aTAACCAACCACGGAACGGAATGGTCATAAAGTCGAGAATCGAACTTATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACTTCTCCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGTGTTACCCGCCTGACCaa > 1:159329/1‑150 (MQ=255) aaccaaccAAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAAc < 3:560870/151‑1 (MQ=255) accaaccaAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACg < 2:1330406/151‑1 (MQ=255) accaaccaAGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACg < 1:650892/151‑1 (MQ=255) caaccaaGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGc > 1:1042813/1‑150 (MQ=255) ccaaGGAACGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGcc < 3:218817/151‑1 (MQ=255) cGGAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTgcc > 2:746887/1‑151 (MQ=255) ggAATGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTgcca < 2:1291332/151‑1 (MQ=255) aaTGGTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTgccagc < 4:411362/151‑1 (MQ=255) aaTGGTAATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTGTGTTAAACAATAACGTCTGCACAAAATAGCCTGCAAGGAAAGTCTGAATTAACCCCGAGTTACCCGCCTGACCAAAACGCAGCCCCGTTgccag < 1:358225/150‑1 (MQ=255) ggTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTgccagcca < 1:1412227/150‑1 (MQ=255) gTCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTGCCAGCCAGa < 2:1310569/151‑1 (MQ=255) tCATAAAGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTGCCAGCCAGa > 1:1573713/1‑150 (MQ=255) aaaGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTGCCAGCCAGAAGGa < 1:745089/150‑1 (MQ=255) aaaGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTGCCAGCCAGAAGGAt > 2:626085/1‑151 (MQ=255) aaGTCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTGCCAGCCAGAAGGAtt < 2:699867/151‑1 (MQ=255) | TAATGGTGCTCGGGGCATAGCTTTTATCTACAATGATAGAAAGCATTGGCCATGCCAGCACAATCGCGGAGGTATTCATAATAATATACGGGATCCGGCGACCAATTTTATCGGATAACCAACCAAGGAACGGAATGGTCATAAAGCCGAGAATCGAACTGATCATCAATGCATCTGTTGGAATTGCTTTGTTAAACAATAACGTCTGCACTAAATAGCCTGCAAGGAAAGTCTGAATTAACCCGGAGTTACCCGCCTGACCAAAACGCAGCCCTGTTGCCAGCCAGAAGGATT > NC_000913/1631355‑1631648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |