BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,967,290	C→T	G50S (GGT→AGT)	cheY ←	chemotaxis regulator transmitting signal to flagellar motor component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,967,290	0	C	T	100.0%	537.5 / NA	136	G50S (GGT→AGT)	cheY	chemotaxis regulator transmitting signal to flagellar motor component
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (61/75); total (61/75)

Only 100 of 139 total aligned reads displayed.

GCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCAT  >  NC_000913/1967142‑1967437

  cgcAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgcct                                                                                                                                                 >  3:590664/1‑151 (MQ=255)

     agcaATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACtgcctgcc                                                                                                                                              >  1:252574/1‑151 (MQ=255)

       caATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGcctgcctg                                                                                                                                            >  1:1157224/1‑151 (MQ=255)

               ttCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTAt                                                                                                                                    >  4:331999/1‑151 (MQ=255)

                tctcTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTAtt                                                                                                                                   >  3:479434/1‑151 (MQ=255)

                 ctctTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACGTa                                                                                                                                     <  1:707025/148‑1 (MQ=255)

                     ttcttcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTgaga                                                                                                                               <  3:332017/150‑1 (MQ=255)

                     ttcttcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTgag                                                                                                                                >  2:1695934/1‑149 (MQ=255)

                     ttcttcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTgag                                                                                                                                <  2:133799/149‑1 (MQ=255)

                     ttcttcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGGTCCTGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTgag                                                                                                                                <  1:176400/149‑1 (MQ=255)

                      tcttcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTgaga                                                                                                                               >  2:252246/1‑149 (MQ=255)

                      tcttcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGc                                                                                                                             >  1:1260832/1‑151 (MQ=255)

                         tcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGc                                                                                                                             <  1:103685/148‑1 (MQ=255)

                          cGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTc                                                                                                                          <  3:210640/150‑1 (MQ=255)

                           gCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGa                                                                                                                        <  4:402686/151‑1 (MQ=255)

                            cTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGAc                                                                                                                       >  2:1564407/1‑151 (MQ=255)

                            cTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGAc                                                                                                                       >  1:555415/1‑151 (MQ=255)

                            cTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGAc                                                                                                                       >  2:998746/1‑151 (MQ=255)

                             ttCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACg                                                                                                                      >  1:751293/1‑151 (MQ=255)

                                 gCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCa                                                                                                                   <  1:1494215/150‑1 (MQ=255)

                                  cAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATc                                                                                                                 <  2:297196/151‑1 (MQ=255)

                                  cAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATc                                                                                                                 <  2:1489807/151‑1 (MQ=255)

                                   aGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCt                                                                                                                >  3:319838/1‑151 (MQ=255)

                                     tCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTc                                                                                                              >  1:1301682/1‑151 (MQ=255)

                                      cACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTcc                                                                                                             <  1:353987/151‑1 (MQ=255)

                                        ccATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCg                                                                                                            <  2:385856/150‑1 (MQ=255)

                                         cATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCt                                                                                                          >  3:514900/1‑151 (MQ=255)

                                         cATTAACACTGGCAATGCCGACATCCCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCt                                                                                                          <  2:758389/151‑1 (MQ=255)

                                                    gCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACatt                                                                                               <  2:1574460/151‑1 (MQ=255)

                                                    gCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACatt                                                                                               <  4:566731/151‑1 (MQ=255)

                                                      aaTGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACattat                                                                                             >  1:1510289/1‑151 (MQ=255)

                                                        tGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTg                                                                                           >  1:398946/1‑151 (MQ=255)

                                                        tGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTg                                                                                           >  1:953886/1‑151 (MQ=255)

                                                            gACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATc                                                                                       >  2:1531411/1‑151 (MQ=255)

                                                            gACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATc                                                                                       >  2:1730652/1‑151 (MQ=255)

                                                              cATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATccc                                                                                     <  1:1359867/151‑1 (MQ=255)

                                                               aTCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATccc                                                                                     >  3:118177/1‑150 (MQ=255)

                                                               aTCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATccc                                                                                     >  3:11855/1‑150 (MQ=255)

                                                               aTCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCa                                                                                    <  4:287655/151‑1 (MQ=255)

                                                                   cgcCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAg                                                                                   <  1:735233/148‑1 (MQ=255)

                                                                   cgcCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGctc                                                                                >  4:580798/1‑151 (MQ=255)

                                                                     ccATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGctct                                                                               <  1:952617/150‑1 (MQ=255)

                                                                      cATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCttt                                                                             <  3:376273/151‑1 (MQ=255)

                                                                            cACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTcagcag                                                                       <  1:1406222/151‑1 (MQ=255)

                                                                             aCGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAgg                                                                      <  1:1657726/151‑1 (MQ=255)

                                                                               gAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGtt                                                                    >  4:313745/1‑151 (MQ=255)

                                                                               gAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGtt                                                                    <  1:870281/151‑1 (MQ=255)

                                                                                aaTTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGtt                                                                    >  2:764086/1‑150 (MQ=255)

                                                                                aaTTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGtt                                                                    >  2:858709/1‑150 (MQ=255)

                                                                                aaTTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGt                                                                     <  1:976678/149‑1 (MQ=255)

                                                                                  ttGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACg                                                                 >  3:573386/1‑151 (MQ=255)

                                                                                    gTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGc                                                                <  1:1031731/150‑1 (MQ=255)

                                                                                         cAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTAt                                                           <  1:883995/150‑1 (MQ=255)

                                                                                         cAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATg                                                          >  1:1708481/1‑151 (MQ=255)

                                                                                           gCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCg                                                        >  3:224558/1‑151 (MQ=255)

                                                                                           gCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCg                                                        <  2:36727/151‑1 (MQ=255)

                                                                                             aaTTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTc                                                      <  1:1619049/151‑1 (MQ=255)

                                                                                              aTTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCg                                                     <  1:763712/151‑1 (MQ=255)

                                                                                              aTTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCg                                                     >  1:11484/1‑151 (MQ=255)

                                                                                              aTTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCg                                                     <  2:389257/151‑1 (MQ=255)

                                                                                               ttCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGc                                                    >  2:678686/1‑151 (MQ=255)

                                                                                                tCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGc                                                    >  3:415263/1‑150 (MQ=255)

                                                                                                tCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGc                                                    >  1:365363/1‑150 (MQ=255)

                                                                                                 ccAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCa                                                   <  1:1032775/150‑1 (MQ=255)

                                                                                                     gCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCAtggtg                                              >  2:323887/1‑151 (MQ=255)

                                                                                                        atccatATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGa                                            >  1:594623/1‑150 (MQ=255)

                                                                                                          ccatATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGaaa                                          <  2:434434/150‑1 (MQ=255)

                                                                                                          ccatATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGaaa                                          <  2:332729/150‑1 (MQ=255)

                                                                                                           catATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAg                                        <  3:2491/151‑1 (MQ=255)

                                                                                                            atatTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGACAAGt                                       >  1:1202465/1‑151 (MQ=255)

                                                                                                            atatTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGt                                       >  1:577799/1‑151 (MQ=255)

                                                                                                            atatTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGt                                       >  2:1003649/1‑151 (MQ=255)

                                                                                                            atatTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGt                                       >  2:1385153/1‑151 (MQ=255)

                                                                                                             tatTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTc                                      >  2:574315/1‑151 (MQ=255)

                                                                                                              atTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCa                                     <  1:660038/151‑1 (MQ=255)

                                                                                                                  ggCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCca                                 <  4:86302/151‑1 (MQ=255)

                                                                                                                  ggCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCca                                 <  1:254834/151‑1 (MQ=255)

                                                                                                                    cATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCcaca                               <  1:406568/151‑1 (MQ=255)

                                                                                                                     aTGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCcaca                               >  2:1036732/1‑150 (MQ=255)

                                                                                                                         tCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCa                           <  3:257433/150‑1 (MQ=255)

                                                                                                                         tCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCa                           <  1:37695/150‑1 (MQ=255)

                                                                                                                         tCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCa                           <  2:731428/150‑1 (MQ=255)

                                                                                                                           cAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCaaa                         >  2:70013/1‑150 (MQ=255)

                                                                                                                            aGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCaaaaa                       <  2:134882/151‑1 (MQ=255)

                                                                                                                            aGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCaaaaa                       <  4:75361/151‑1 (MQ=255)

                                                                                                                            aGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCaaaa                        >  2:98525/1‑150 (MQ=255)

                                                                                                                             gTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAAt                      <  1:852170/151‑1 (MQ=255)

                                                                                                                             gTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAAt                      <  4:413607/151‑1 (MQ=255)

                                                                                                                               cGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAAttt                    >  1:1737678/1‑151 (MQ=255)

                                                                                                                                   gaTAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAg                 <  2:1472897/150‑1 (MQ=255)

                                                                                                                                   gaTAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGt                <  2:946089/151‑1 (MQ=255)

                                                                                                                                   gaTAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGt                <  2:279715/151‑1 (MQ=255)

                                                                                                                                    aTAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGtt               <  2:1410347/151‑1 (MQ=255)

                                                                                                                                      aaCAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTc              <  4:56048/150‑1 (MQ=255)

                                                                                                                                      aaCAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTc              <  2:681382/150‑1 (MQ=255)

                                                                                                                                      aaCAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCt             <  2:578288/151‑1 (MQ=255)

                                                                                                                                        cAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCttt           >  4:205573/1‑151 (MQ=255)

                                                                                                                                         aaaTCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTa          <  1:1332079/151‑1 (MQ=255)

                                                                                                                                               aTAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGcc    >  1:1606266/1‑151 (MQ=255)

                                                                                                                                                tAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGcc    >  2:1331031/1‑150 (MQ=255)

GCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCAT  >  NC_000913/1967142‑1967437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`