| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,467,027 | C→T | R161R (CGC→CGT) | intS → | CPS‑53 (KpLE1) prophage; putative prophage CPS‑53 integrase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,467,027 | 0 | C | T | 98.7% | 571.1 / NA | 150 | R161R (CGC→CGT) | intS | CPS‑53 (KpLE1) prophage; putative prophage CPS‑53 integrase |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (83/65); total (85/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 150 total aligned reads displayed.
AACTGAACTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGCAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCATTCAACAA > NC_000913/2466883‑2467173 | aaCTGAACTTGCCAAAATGTTTGCCGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTagaaga < 1:1085779/151‑1 (MQ=255)aaCTGAACTTGCAAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTagaaga < 2:1369805/151‑1 (MQ=255) tGAACTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATg > 4:557009/1‑150 (MQ=255) aaCTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATgcgg < 4:575165/151‑1 (MQ=255) aaCTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATgcgg > 2:452696/1‑151 (MQ=255) aCTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATgcggc > 3:466915/1‑151 (MQ=255) cTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATgcggcg > 2:1556433/1‑151 (MQ=255) ttGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATgcggcg > 1:1447045/1‑150 (MQ=255) ttGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATgcggcg > 2:564825/1‑150 (MQ=255) ttGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATgcggcg > 2:851086/1‑150 (MQ=255) tGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATgcggcg < 1:182305/149‑1 (MQ=255) ccAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAgg < 1:1233408/150‑1 (MQ=255) ccAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGt < 2:1550470/151‑1 (MQ=255) ccAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGt < 3:312755/151‑1 (MQ=255) ccAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGt > 4:298376/1‑151 (MQ=255) cAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGt < 1:1144667/150‑1 (MQ=255) aaaaTGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGttt > 3:556863/1‑151 (MQ=255) aaaTGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGtttt > 1:243819/1‑151 (MQ=255) aaTGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTc > 2:1419956/1‑151 (MQ=255) aTGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTcc > 2:1346065/1‑151 (MQ=255) aTGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTcc > 4:735/1‑151 (MQ=255) gTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCg < 4:166102/150‑1 (MQ=255) cgacgacATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCt < 2:413665/151‑1 (MQ=255) acgacATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTAt < 2:1617377/151‑1 (MQ=255) gacATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTg < 1:1070291/151‑1 (MQ=255) acATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGt < 3:8929/151‑1 (MQ=255) cATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTc < 1:1389297/151‑1 (MQ=255) cATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTc > 2:541169/1‑151 (MQ=255) cATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTc > 2:240795/1‑151 (MQ=255) atgttACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTc > 4:336356/4‑150 (MQ=255) aTTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTc > 4:515243/1‑150 (MQ=255) ttACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCAcc < 2:501490/150‑1 (MQ=255) tACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCgg > 2:729759/1‑151 (MQ=255) aCCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCgg < 1:1458107/150‑1 (MQ=255) aCCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCgg > 1:707761/1‑150 (MQ=255) ccTATCATTAGCGGCCTTGAAATTGAGGATAATGAGCCGATGCAACTGCTGGAAGTAATCAGCAGGTTTGAAGATCGCGGTGCTATGGAACGAGCCAACAAATCACGTAGAAGATGAGGCGAGGTTTTCCGTTACGGTATTGTAAcc > 1:1612138/1‑147 (MQ=255) tATCATTGGAGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGCAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGacg > 1:168831/1‑148 (MQ=255) cATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCt > 1:1364770/1‑151 (MQ=255) tGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTaa > 1:725237/1‑150 (MQ=255) tGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTaa > 1:670931/1‑150 (MQ=255) ggcggcCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTaaa < 1:613003/150‑1 (MQ=255) tgcCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAatat > 1:814363/2‑150 (MQ=255) ggcATTGAAATTCAGGATATTGAGCCGATGCAACAGCTGGAAGGAATCCGCAGGTTTGAAGATCGCGGTGCAATGAAACGAGCCAACAAAGCAAGTAGAAGATGCGGCGAGGTTTTCCGGTAAGCTATTGACACCGGAAGGGCTAAat > 1:1262359/1‑148 (MQ=255) gcCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATaa < 1:175248/151‑1 (MQ=255) gcCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATaa < 1:420475/151‑1 (MQ=255) ttGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAAccc > 3:476738/1‑151 (MQ=255) tGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAAcc < 2:433701/149‑1 (MQ=255) aaaTTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGc > 2:294301/1‑151 (MQ=255) aaaTTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGc < 2:1541243/151‑1 (MQ=255) ttCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCAcc > 2:406960/1‑151 (MQ=255) aGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTg > 1:419416/1‑150 (MQ=255) atTGAGCCGCTGCAACTGCTGGAAGTAATCCACAGGGTTGAAGATCGCGGTGCCATGGAACGAGCCACCCAAGCACGCAGAAGATGCGGCGAGGTTTTCCGTTACGCTGTTGTCAACGGAAGGGATAAATATAACCCGGCACCTGACCTTg > 1:1698914/1‑151 (MQ=255) atTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCtt < 2:293712/150‑1 (MQ=255) gAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTg > 4:252613/1‑151 (MQ=255) aGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTg > 1:762247/1‑150 (MQ=255) aGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTg > 2:1214212/1‑150 (MQ=255) tGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCAt > 1:533547/1‑151 (MQ=255) aaCTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGaa < 2:125270/151‑1 (MQ=255) aaCTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGa > 2:547149/1‑150 (MQ=255) aaCTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGAGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGa > 1:1311728/1‑150 (MQ=255) gctgGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAgg > 3:91759/1‑149 (MQ=255) gctgGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGa < 2:423463/151‑1 (MQ=255) ggAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATAc > 3:170524/1‑151 (MQ=255) gAAGTAATCCGCAGTTTTGAAGATCGCGGTGCAATGGAGCGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACAGGAAGGGCTAAATATAACCCGGCACCTGCCCTTGCTGACGCCATGAAGGGATGcc < 1:212358/151‑1 (MQ=255) gAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATAcc < 1:1548207/151‑1 (MQ=255) gAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATAcc > 3:415585/1‑151 (MQ=255) aaGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCg > 2:172204/1‑151 (MQ=255) gTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGc > 3:344706/1‑150 (MQ=255) aaTCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCa > 1:1626460/1‑149 (MQ=255) aTCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCa > 2:492394/1‑148 (MQ=255) aGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACt > 2:577189/1‑151 (MQ=255) ggTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGGGGCGAGGGTTTTCGTTACGCTAATGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGAAACCGCAAGAAGAACtt > 1:286234/1‑151 (MQ=255) ggTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACtt < 1:857482/151‑1 (MQ=255) ggTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACtt < 2:707864/151‑1 (MQ=255) ttGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTcc < 1:544111/150‑1 (MQ=255) gAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGt < 2:765251/151‑1 (MQ=255) aaGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGtt < 2:1445072/151‑1 (MQ=255) aGATCGCGGGGCAATGCAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCCATTGTCACCGGACGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGCAGAACTTCCCGttt > 1:337264/1‑151 (MQ=255) gATCGCGGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTttc > 3:563079/1‑151 (MQ=255) tCGCGGTGCAATGGAACGAGCCAACAAATCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTTTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGTGATACCGCAAGGAGAACATCCCGTttctt > 2:471985/1‑151 (MQ=255) gcgGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTcc < 2:230488/151‑1 (MQ=255) cgGTGCAATGGAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCt < 2:1497400/151‑1 (MQ=255) ggAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCa < 4:490990/150‑1 (MQ=255) ggAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCa < 1:1214068/150‑1 (MQ=255) gAACGAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGa < 2:1531982/151‑1 (MQ=255) gAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATccc < 1:1556274/151‑1 (MQ=255) gAGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATccc > 1:116311/1‑151 (MQ=255) aGCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATTAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCg > 2:363384/1‑151 (MQ=255) gCCAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCgg > 2:414871/1‑151 (MQ=255) ccAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGc < 2:1718983/151‑1 (MQ=255) ccAACAAAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGc > 2:1132097/1‑151 (MQ=255) caacaaAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGc > 3:5187/1‑150 (MQ=255) caacaaAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGc > 1:89065/1‑150 (MQ=255) caacaaAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGc < 1:760090/150‑1 (MQ=255) aacaaAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCAt < 2:616484/151‑1 (MQ=255) acaaAGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCAtt < 2:922449/151‑1 (MQ=255) aaaGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCATTca < 4:556843/151‑1 (MQ=255) aGCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCATGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCATTcaac < 1:794335/151‑1 (MQ=255) gCACGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCATTcaaca < 3:508560/151‑1 (MQ=255) aCGTAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCATTcaacaa > 2:1144622/1‑150 (MQ=255) | AACTGAACTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGCAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCATTCAACAA > NC_000913/2466883‑2467173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |