Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,350,8530AC42.2% 204.4 / 16.0 102S725A (TCA→GCA) arcBaerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB
Reads supporting (aligned to +/- strand):  ref base A (54/5);  new base C (0/43);  total (54/48)
Fisher's exact test for biased strand distribution p-value = 1.49e-23
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 103 total aligned reads displayed.

TTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTACAAGT  >  NC_000913/3350704‑3351001
                                                                                                                                                      |                                                                                                                                                    
ttttGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGAc                                                                                                                                                     >  4:1354834/1‑151 (MQ=255)
 tttGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGa                                                                                                                                                      <  4:455100/149‑1 (MQ=255)
 tttGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGAcc                                                                                                                                                    >  1:139322/1‑151 (MQ=255)
  ttGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGAcc                                                                                                                                                    <  3:258162/150‑1 (MQ=255)
    gCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGAcccc                                                                                                                                                  <  3:189179/150‑1 (MQ=255)
    gCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGAcccc                                                                                                                                                  <  4:79227/150‑1 (MQ=255)
     tcacccacGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCccgc                                                                                                                                                >  2:634352/2‑151 (MQ=255)
               tttCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCttt                                                                                                                                       >  3:1082/1‑150 (MQ=255)
                  cAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAAtt                                                                                                                                   >  2:1391054/1‑151 (MQ=255)
                   aGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAAttt                                                                                                                                  >  3:414686/1‑151 (MQ=255)
                        ttCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGt                                                                                                                             >  2:1577619/1‑151 (MQ=255)
                           tACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGtcct                                                                                                                          >  4:102420/1‑151 (MQ=255)
                             cgtcgtGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGtccttc                                                                                                                        >  4:83870/1‑151 (MQ=255)
                             cgccgggccccctctctTTTTTCATCACTGAATCCCCTCCCCCGCCTTTTTCTCCCGAGGCCGAGGGGTCAGGAGACTGAATTGGCTTCCCCTGTTTTGGAGGGTGGCTTAA‑CCCCCCTGCCCCCGCCGCACCTTTAATTTTATGtcc                                                                                                                           <  2:1468285/135‑1 (MQ=255)
                              gtcgtGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGtccttcc                                                                                                                       >  1:266574/1‑151 (MQ=255)
                              gtcgtGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGtccttcc                                                                                                                       >  4:265654/1‑151 (MQ=255)
                              gtcgtGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGtccttcc                                                                                                                       >  2:1200363/1‑151 (MQ=255)
                               tcgtGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGtccttcct                                                                                                                      >  1:245127/1‑151 (MQ=255)
                                 gtGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTc                                                                                                                     >  4:491219/1‑150 (MQ=255)
                                 gtGACCCCACTCTTCTTTCATCTCTTCAACCCATTCCCCGACTTTATCTCCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGCCCCAGCTTTTGCAGATGGCGTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTc                                                                                                                     <  4:1181105/150‑1 (MQ=255)
                                  tGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTca                                                                                                                    >  4:657143/1‑150 (MQ=255)
                                  ggACCCCACTCTCCTTCCATCTCTCCAACCCATCCCCCGACTTTATCTCCCCAGGCCGGAAGGTCGGGAGACTGATTTTGCTGCCCCATCTTTTGAGGGTGTCAAAA‑CCCCCCCTCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTcaa                                                                                                                   <  2:1561876/150‑1 (MQ=255)
                                     cccccctctTTTTTCATCTCTTAAATCCATCCACCGACGTTATCTCCCCAGGCCGGAAGGTCAGGAGACTAAATTTGCTGCCCCGGTTGTTGCAGATGGCGTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTcaa                                                                                                                   <  3:441733/143‑1 (MQ=255)
                                     cccccctctTCTTTCTTCTCTCCAACCCATCCCCCGACTTTATCTCCCCAGGCCGGAGGGTCAGGAGATTGATTTTGCTGCCCCAGTTTTTGCAGATGGCGAAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTca                                                                                                                    <  1:402568/142‑1 (MQ=255)
                                     cccccctctTCTTTCATCTCTTCAACCCATCCACCGACGTTATCTCCCCAGGCCGGAGGGTCAGGAGACTGATTTTGCTGCCCCAGCTTTTGCAGATGGCGTAC‑CCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTcaaca                                                                                                                 <  4:494835/145‑1 (MQ=255)
                                     cccccctctTCTTTCATCTCTCAAACCCATCCCCCGACTTTATCTCCCCAGGCCGGAAGGTCGGGAGACTAATTTTGCTGACCCAGTTTTTGCAGATGGCCTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTcaaca                                                                                                                 <  1:412998/145‑1 (MQ=255)
                                      gCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAAt                                                                                                               >  4:909238/1‑151 (MQ=255)
                                       ccACGCTTCTTTCACCCGTTAATCCCATCCCCCGGTTTTATCTCCCCAGGCCGGAGGGCCAGGATAATAATTTTGCTGCCCGAGCTGTTGCATAGGACGAAA‑CCCCTCGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATg                                                                                                              <  4:1121483/151‑1 (MQ=255)
                                        ccctctTCTTTCACCTCTTCAACCCATTCCCCGACGTTATCTCCCCAGGCCGGAAGGTCAGGAGACTGATTTTGCTGCCCCAGCTGTTGCAGAGGGCGTAA‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGc                                                                                                             <  4:1267998/149‑1 (MQ=255)
                                          ctctTCTTTCATCTCTTCAACCCATCCCCCGACTTTATCTTCCCAGGCGGGAAGGTCAGGAGACTGATTTTGCTGCCCCAGTTTTTGCAGATGGCGTAC‑CCCCACGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGc                                                                                                             <  1:375169/149‑1 (MQ=255)
                                           tcttctTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtt                                                                                                          >  2:880496/1‑151 (MQ=255)
                                               cttTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtttttt                                                                                                      >  4:1229446/1‑151 (MQ=255)
                                                 ttCATCTCTTCAATCCATTCCCCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGTTTTTGCAGAGGGCGTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTa                                                                                                     <  3:194511/150‑1 (MQ=255)
                                                   cATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATcc                                                                                                  >  4:1568132/1‑151 (MQ=255)
                                                      ctctTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTgc                                                                                               >  3:420976/1‑151 (MQ=255)
                                                         tcaaacccATCCCCCGCCTTTTTCTCCCCAGGCGGAAAGGTCGGGAGACTGAATTTGCTGCCCCAGCTGTTGCAGAGGGCTAAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTg                                                                                                <  4:715114/141‑1 (MQ=255)
                                                          tCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCg                                                                                           >  4:315840/1‑151 (MQ=255)
                                                            actCCATTCCCCCACTTTATCTCCCCAGGCCGGAAGGTCAGGATACTGAATTTGCGGCCCCTGGTGTTGAAGTTGGCCTAC‑CCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTc                                                                                         <  2:986433/149‑1 (MQ=255)
                                                            aaTCCTTCCCCCGACTTTATCTCCCCAGGCCGGAAGTTCAGGAGACTAATTTTGCTACCCCAGTTGTTGCAGATGGCTTAC‑CCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTgc                                                                                               <  2:1343326/145‑1 (MQ=255)
                                                            aaTCCATCCCCCGACGTTATCTCCCCAGGCCGGAAGGTCAGGAGACTGATTTTGCTGCCCCAGTTGTTGCAGATGGCGTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTgcgc                                                                                             <  4:384000/147‑1 (MQ=255)
                                                                  ttCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTc                                                                                   >  2:1384235/1‑151 (MQ=255)
                                                                    ccccgcgtttATCTTCCCGGGCCGGAGGGGCAGGAGACTAATTTTCCTCACCCATTTGTTGAAG‑TGGCCTAACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCg                                                                                           <  1:19500/133‑1 (MQ=255)
                                                                    ccccgcctttATCTCCCCAGGCCGAAGGGTCGGGAGACTAAATTTGCTGCCCCAGCTGTTGCAGATGGCGTAC‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGa                                                                                 <  3:435679/143‑1 (MQ=255)
                                                                    ccccGACTTTATCTCCCCAGGCGGGAAGGTCAGGAGACTGAATTTGCTGCCCCAGCTGTTGCAGATGGCGTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCg                                                                                  <  4:1564337/148‑1 (MQ=255)
                                                                    ccccGACTTTATCTCCCCAGGCCGGAGGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCTTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGa                                                                                      <  4:1206135/144‑1 (MQ=255)
                                                                    ccccGACTTTATCTCCCCAGCCCGGAAGGTCAGGAGACTGATTTTGCTGCCCCAGTTTTTGCAGATGGCGTAC‑CCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTg                                                                                                <  2:266845/134‑1 (MQ=255)
                                                                    ccccGACGTTTTCTCCCCAGGCCGGAAGGTCAGGAGACTAATTTTGCTGCCCCAGTTGTTGAAGAGGGCGAAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGAt                                                                                     <  2:984728/145‑1 (MQ=255)
                                                                     aCCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGAc                                                                                >  2:196238/1‑151 (MQ=255)
                                                                      cccacttaaTCTCCCCGGGCCGGAAGGTAGGGGGACTGATTTCGCCGCCCCGGTTGTTGCAGAGGGCTTAC‑CCCCACGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCg                                                                                  <  2:1611640/140‑1 (MQ=255)
                                                                      ccGACTTTATCTCCCCGGGCCGGAGGGTCGGGAGATTAATTTTGCTCCCCCAGTTTTTGAAGATGTCTTAC‑CCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCg                                                                                  <  2:1267333/148‑1 (MQ=255)
                                                                      ccGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACt                                                                               >  4:898854/1‑151 (MQ=255)
                                                                          cGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTcc                                                                             >  2:1484454/1‑149 (MQ=255)
                                                                          cGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTcc                                                                             >  2:1434278/1‑149 (MQ=255)
                                                                           gTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGc                                                                          >  3:300313/1‑151 (MQ=255)
                                                                            ttATCTCCCCAGGCGGGAAGGTCAGGAGACTGATTTTGCTCACCCAGCTTTTGCAGAGGGCGTAC‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGc                                                                          <  4:866508/150‑1 (MQ=255)
                                                                            ttATCTCCCCAGGCCGGAAGGTCGGGAGACTGATTTTGCTGCCCCATCTGTTGCAGATGGCGTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCa                                                                            <  2:139205/148‑1 (MQ=255)
                                                                            ttATCTCCCCAGGCCGGAAGGTCAGGAGACTGATTTTCCTGACCCAGTTTTTGAAGATGGCGAAC‑CCCCCCGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTc                                                                              <  2:1168921/146‑1 (MQ=255)
                                                                              aTCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACg                                                                       >  2:1356425/1‑151 (MQ=255)
                                                                                    ccAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGAc                                                                  >  4:788688/1‑150 (MQ=255)
                                                                                    cagggCCGGAGGGTCGGGAGACTGATTTTGCTGCCCCAGTTTTTGCAGATGGCGTAC‑CCCCTCTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTg                                                                    <  1:267850/145‑1 (MQ=255)
                                                                                      aGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACAt                                                                >  4:1219932/1‑150 (MQ=255)
                                                                                      aGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACAt                                                                >  2:866490/1‑150 (MQ=255)
                                                                                       ggCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACAt                                                                >  4:614536/1‑149 (MQ=255)
                                                                                         ccGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGcc                                                            >  3:359252/1‑151 (MQ=255)
                                                                                           ggAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCg                                                          >  4:1117093/1‑151 (MQ=255)
                                                                                            gAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCgg                                                         >  4:928805/1‑151 (MQ=255)
                                                                                             agggTCAGGAGACTGAATTTGCTGACCCAGTTGTTGCAGATGGCGTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGc                                                        <  3:39937/149‑1 (MQ=255)
                                                                                               gttCAGGAGACTGAATTTCCAGCCCCAGCTGTCGGATATGCCGCAC‑CCCCCCCGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGcat                                                      <  1:161485/149‑1 (MQ=255)
                                                                                                    ggAAACTAATTTTGCTACCCCAGCTTTTGCAGAGGGCAAAC‑CCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGcatcat                                                   <  3:174384/149‑1 (MQ=255)
                                                                                                    gaagaCTGAATTTGCTGACCCGTCTGTTGCAGATGGCGTAA‑CCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCAtct                                                 <  2:159208/149‑1 (MQ=255)
                                                                                                            attttGCTGACCCAGTTTTTGCAGATGGCGTAC‑CCCCCCGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTtctc                                             <  3:266590/145‑1 (MQ=255)
                                                                                                             ttttGCTGCCCCAGCTTTTGAGGAGGTGGCAA‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAac                                         <  2:717590/149‑1 (MQ=255)
                                                                                                               ttGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACAcc                                      >  4:578448/1‑151 (MQ=255)
                                                                                                               cgctctcccgttcTGTTGGAGATGGCGAAC‑CCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAacac                                       <  1:437527/138‑1 (MQ=255)
                                                                                                                  cTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGc                                    >  4:1235558/1‑150 (MQ=255)
                                                                                                                     aCCCAGTTGTTGAAGATGGCATAC‑CCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTa                                  <  2:318861/149‑1 (MQ=255)
                                                                                                                      cccAGCTGTTGCAGAGGGCGTAC‑CCCCCCTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTa                                  <  2:490532/148‑1 (MQ=255)
                                                                                                                        cAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCg                             >  4:1038459/1‑151 (MQ=255)
                                                                                                                        cAGCTGTTGCAGATGGCGTAA‑CCCCACTGA‑CCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGt                            >  1:220990/1‑151 (MQ=255)
                                                                                                                         aGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGt                            >  4:1067138/1‑151 (MQ=255)
                                                                                                                             gTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAacac                                       >  3:437546/1‑136 (MQ=255)
                                                                                                                              ttGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTg                       >  1:418057/1‑151 (MQ=255)
                                                                                                                              ttGCAGATGCCGTAC‑CCCCCCGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGt                        <  2:102247/150‑1 (MQ=255)
                                                                                                                                 cAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATc                    >  1:355461/1‑151 (MQ=255)
                                                                                                                                 cAGATGGCCTAC‑CCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATc                    <  2:551592/151‑1 (MQ=255)
                                                                                                                                 cAGATGGCAAAC‑CCCCGCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGAt                     <  2:497736/150‑1 (MQ=255)
                                                                                                                                     atgccacacccccACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATc                    <  2:1415375/139‑1 (MQ=255)
                                                                                                                                       gCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTc              >  4:1343939/1‑151 (MQ=255)
                                                                                                                                        cGTAC‑CCCCCCCGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAg                  <  2:1145887/146‑1 (MQ=255)
                                                                                                                                        cGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCg             >  3:418901/1‑151 (MQ=255)
                                                                                                                                            acccccACGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCgg            <  4:785031/147‑1 (MQ=255)
                                                                                                                                            a‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCGGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTcc         >  2:1055392/1‑151 (MQ=255)
                                                                                                                                            a‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTcc         >  2:100421/1‑151 (MQ=255)
                                                                                                                                              ccccACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGt           <  1:95620/148‑1 (MQ=255)
                                                                                                                                               cccACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTa       <  1:1082/151‑1 (MQ=255)
                                                                                                                                                ccACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTAc      >  4:539890/1‑151 (MQ=255)
                                                                                                                                                ccACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTAc      >  2:1510779/1‑151 (MQ=255)
                                                                                                                                                 cACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTAc      >  1:290355/1‑150 (MQ=255)
                                                                                                                                                   cTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTACa     >  2:897720/1‑149 (MQ=255)
                                                                                                                                                    tGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTACAAGt  >  1:81807/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
TTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCCGGAAGGTCAGGAGACTGAATTTGCTGACCCAGCTGTTGCAGATGGCGTAA‑CCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTACAAGT  >  NC_000913/3350704‑3351001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑