Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,905,028 T→C T131A (ACC→GCC)  queE ← 7‑carboxy‑7‑deazaguanine synthase; queosine biosynthesis

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,905,0280TC100.0% 405.6 / NA 103T131A (ACC→GCC) queE7‑carboxy‑7‑deazaguanine synthase; queosine biosynthesis
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (49/54);  total (49/54)

Only 100 of 103 total aligned reads displayed.

TCAGCGTTGCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGTATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATCCCT  >  NC_000913/2904884‑2905174
                                                                                                                                                |                                                                                                                                                  
tCAGCGTTGCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCgg                                                                                                                                              >  2:480979/1‑151 (MQ=255)
 cAGCGTTGCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCgg                                                                                                                                              <  3:222505/150‑1 (MQ=255)
   gCGTTGCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGgtg                                                                                                                                            >  2:139903/1‑150 (MQ=255)
     gTTGCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGc                                                                                                                                         <  4:1415776/151‑1 (MQ=255)
       tGCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCa                                                                                                                                        <  4:1636954/150‑1 (MQ=255)
        gCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAg                                                                                                                                       <  2:446289/150‑1 (MQ=255)
        gCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGc                                                                                                                                      >  4:8722/1‑151 (MQ=255)
        gCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGc                                                                                                                                      >  3:77142/1‑151 (MQ=255)
          cAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGt                                                                                                                                    >  2:1677102/1‑151 (MQ=255)
          cAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGt                                                                                                                                    <  3:188845/151‑1 (MQ=255)
                ttCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTc                                                                                                                               <  2:1098639/150‑1 (MQ=255)
                 tCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCAt                                                                                                                             >  4:1674293/1‑151 (MQ=255)
                      cAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTa                                                                                                                        <  4:495740/151‑1 (MQ=255)
                       aGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTAc                                                                                                                       <  3:186911/151‑1 (MQ=255)
                           cTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACt                                                                                                                   >  2:363262/1‑151 (MQ=255)
                             tCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACt                                                                                                                   <  1:263667/149‑1 (MQ=255)
                              cAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGt                                                                                                                >  4:1037716/1‑151 (MQ=255)
                               aaTATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGtt                                                                                                               >  4:1587152/1‑151 (MQ=255)
                               aaTATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGtt                                                                                                               >  2:195791/1‑151 (MQ=255)
                                  atCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCg                                                                                                            >  2:490000/1‑151 (MQ=255)
                                    cgcgTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCTAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGa                                                                                                           <  4:624940/150‑1 (MQ=255)
                                    cgcgTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGa                                                                                                           <  2:917262/150‑1 (MQ=255)
                                    cgcgTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGAt                                                                                                          <  2:1625670/151‑1 (MQ=255)
                                      cgTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCt                                                                                                        <  4:1566657/151‑1 (MQ=255)
                                        tACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTgg                                                                                                      >  1:100546/1‑151 (MQ=255)
                                         aCGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGc                                                                                                     <  3:310637/151‑1 (MQ=255)
                                         aCGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGc                                                                                                     <  4:1588798/151‑1 (MQ=255)
                                            cgcCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGc                                                                                                  <  4:462197/151‑1 (MQ=255)
                                              ccccACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCt                                                                                                 >  2:682751/1‑150 (MQ=255)
                                              ccccACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCt                                                                                                 >  2:204198/1‑150 (MQ=255)
                                               cccACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTa                                                                                                >  4:1097188/1‑150 (MQ=255)
                                                ccACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTaaa                                                                                              <  3:475286/151‑1 (MQ=255)
                                                ccACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTaa                                                                                               >  2:263823/1‑150 (MQ=255)
                                                  aCTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAAc                                                                                            >  1:187209/1‑151 (MQ=255)
                                                         gCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCt                                                                                      <  4:620857/150‑1 (MQ=255)
                                                          cTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCt                                                                                      >  3:372982/1‑149 (MQ=255)
                                                            tGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTc                                                                                  >  4:505497/1‑151 (MQ=255)
                                                             gATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCg                                                                                 >  2:1143848/1‑151 (MQ=255)
                                                             gATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCg                                                                                 >  2:1348623/1‑151 (MQ=255)
                                                             gATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCg                                                                                 <  4:1661681/151‑1 (MQ=255)
                                                                 tCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGc                                                                              <  4:1355943/150‑1 (MQ=255)
                                                                 tCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGc                                                                              >  2:28286/1‑150 (MQ=255)
                                                                  cGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATTCGGTAACCCACGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCa                                                                             <  4:234879/150‑1 (MQ=255)
                                                                  cGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAg                                                                            <  4:294566/151‑1 (MQ=255)
                                                                      ggCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGAtca                                                                        <  1:362092/151‑1 (MQ=255)
                                                                          cgctcCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGAtcagtc                                                                     <  2:76350/150‑1 (MQ=255)
                                                                           gctcCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGAtcagtca                                                                    <  4:77616/150‑1 (MQ=255)
                                                                           gctcCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGAtcagtc                                                                     >  4:1046838/1‑149 (MQ=255)
                                                                             tcCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTg                                                                 >  4:30866/1‑151 (MQ=255)
                                                                              ccAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATcagtcagt                                                                  <  4:449914/149‑1 (MQ=255)
                                                                                aGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGgca                                                              <  2:615337/151‑1 (MQ=255)
                                                                                aGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGgc                                                               >  2:1062988/1‑150 (MQ=255)
                                                                                    ccTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCaa                                                          <  4:716150/151‑1 (MQ=255)
                                                                                       gtgACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAAt                                                        <  2:41484/150‑1 (MQ=255)
                                                                                          acaacaCTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATg                                                    <  2:1525201/151‑1 (MQ=255)
                                                                                           caacaCTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATg                                                    >  4:1617763/1‑150 (MQ=255)
                                                                                            aacaCTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGaa                                                  <  4:1219379/151‑1 (MQ=255)
                                                                                            aacaCTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGa                                                   >  2:1082736/1‑150 (MQ=255)
                                                                                            aacaCTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGa                                                   >  4:385216/1‑150 (MQ=255)
                                                                                            aacaCTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGa                                                   <  2:1181359/150‑1 (MQ=255)
                                                                                            aacaCTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGa                                                   >  3:414352/1‑150 (MQ=255)
                                                                                            aacaCTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGa                                                   >  2:844934/1‑150 (MQ=255)
                                                                                              cacTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATg                                                >  4:703199/1‑151 (MQ=255)
                                                                                              cacTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATg                                                >  4:678932/1‑151 (MQ=255)
                                                                                              cacTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGGGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATg                                                >  3:93133/1‑151 (MQ=255)
                                                                                                 ttCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCa                                              >  4:1190167/1‑150 (MQ=255)
                                                                                                  tCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCa                                              <  4:1634244/149‑1 (MQ=255)
                                                                                                   cATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAg                                            <  3:30836/150‑1 (MQ=255)
                                                                                                   cATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAg                                            <  2:1387004/150‑1 (MQ=255)
                                                                                                   cATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAg                                            <  4:1101755/150‑1 (MQ=255)
                                                                                                      aGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTc                                        <  1:474418/151‑1 (MQ=255)
                                                                                                        ccgccgCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTcac                                      >  2:611928/1‑151 (MQ=255)
                                                                                                         cgccgcGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTcacc                                     >  4:1337245/1‑151 (MQ=255)
                                                                                                          gccgcGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTcacca                                    <  1:127040/151‑1 (MQ=255)
                                                                                                          gccgcGCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTcacc                                     >  1:205788/1‑150 (MQ=255)
                                                                                                            cgcgCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCaccacc                                  >  2:1653203/1‑151 (MQ=255)
                                                                                                            cgcgCATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCaccacc                                  <  3:187223/151‑1 (MQ=255)
                                                                                                             gcgcATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCAccc                                 >  4:1442220/1‑151 (MQ=255)
                                                                                                             gcgcATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCAccc                                 <  4:268069/151‑1 (MQ=255)
                                                                                                              cgcATGTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCg                                >  2:1556825/1‑151 (MQ=255)
                                                                                                                   gTTCAGCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATc                           <  4:1559091/151‑1 (MQ=255)
                                                                                                                       tgCTTTGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATcacc                        >  1:212039/2‑150 (MQ=255)
                                                                                                                          tttGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATg                                                    >  3:172995/1‑119 (MQ=255)
                                                                                                                          tttGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATg                                                    <  1:172981/119‑1 (MQ=255)
                                                                                                                          tttGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACAt                    >  2:1441761/1‑151 (MQ=255)
                                                                                                                           ttGGCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACcaca                     <  4:140141/149‑1 (MQ=255)
                                                                                                                              gCGATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCcg                <  3:141776/151‑1 (MQ=255)
                                                                                                                                gATACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCcgcg              <  4:618902/151‑1 (MQ=255)
                                                                                                                                  tACGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCcgcgcg            >  2:957046/1‑151 (MQ=255)
                                                                                                                                   aCGGTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCgg           <  4:101813/151‑1 (MQ=255)
                                                                                                                                     ggTAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGgtg         >  4:1542115/1‑151 (MQ=255)
                                                                                                                                       tAACCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGgtgt        >  1:297773/1‑150 (MQ=255)
                                                                                                                                        aaCCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTAt      <  2:504795/151‑1 (MQ=255)
                                                                                                                                         aCCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATc     <  4:1679136/151‑1 (MQ=255)
                                                                                                                                         aCCCAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATc     >  3:160938/1‑151 (MQ=255)
                                                                                                                                          cccAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATcc    <  4:753900/151‑1 (MQ=255)
                                                                                                                                           ccAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATccc   >  2:1461923/1‑151 (MQ=255)
                                                                                                                                            cAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATCCCt  <  2:125860/151‑1 (MQ=255)
                                                                                                                                            cAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATCCCt  >  4:1337525/1‑151 (MQ=255)
                                                                                                                                            cAGGCATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATCCCt  <  4:830136/151‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
TCAGCGTTGCCAGTAGTTCATCCAGTGCTTCAATATCGCGTACGCGCCCCACTGGATGCTTGATTTCGTTGGCTCGCTCCAGTGCCTGTGACAACACTTCATAGCCGCCGCGCATGTTCAGCTTTGGCGATACGGTAACCCAGGTATTCGGTGTGCAGCGTACCTCATGAGTACCACTGGTTTCGATCTGGCAGCTAAAACCGTTCTTTTCGAGCAGATCAGTCAGTGGCAGCAAATCATGAATGCAAGGCTCACCACCCGTAATCACCACATGCCGCGCGGTGTATCCCT  >  NC_000913/2904884‑2905174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: