| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,641,005 | G→A | S48S (TCG→TCA) | dtpB → | dipeptide and tripeptide permease B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,641,005 | 0 | G | A | 89.0% | 434.6 / 2.7 | 139 | S48S (TCG→TCA) | dtpB | dipeptide and tripeptide permease B |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (42/80); minor base C (15/0); total (58/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.68e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 139 total aligned reads displayed.
AAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCTACTTCAT > NC_000913/3640858‑3641151 | aaataTGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACaa < 2:553420/151‑1 (MQ=255) atatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAaga < 4:722126/151‑1 (MQ=255) tatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTTTTTG‑TTAAAAAGCTTGGGTTTTCACaa > 3:437416/1‑148 (MQ=255) atGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAagag < 2:1673402/150‑1 (MQ=255) atGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAagag < 4:480501/150‑1 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCa < 4:1382050/150‑1 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAg < 3:336541/151‑1 (MQ=255) aaTACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGG‑TTTTTTTCT‑TTAAA‑AGCTTTGGTTTTCCCAAAAGCAgg > 4:693968/1‑151 (MQ=255) aaTACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAg < 2:223613/150‑1 (MQ=255) acaacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑tt < 2:1285398/151‑1 (MQ=255) acaacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑tt < 2:592045/151‑1 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTTTTTG‑TTAAAAAAGTTGGGTTTTCACAAAAGCAggggtt > 2:84824/1‑147 (MQ=255) aacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCT‑TTTAAAAACTTGGATTTTCCCAAAAGCAGGC‑tttt > 2:610272/1‑151 (MQ=255) aacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑tttt < 4:721089/151‑1 (MQ=255) caacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTG‑TTAAAAAGCTTGGATTCTCACAAGAGCAGGC‑tttt > 3:126401/1‑149 (MQ=255) aacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTTTTCG‑TTTAACAGCTTGGGTTTTCACAAAAGCAGGC‑gttttt > 1:14674/1‑148 (MQ=255) acacCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTG‑TTTAAAAACTTGGGTTCTCACAAGAGCAGGC‑tttttt > 3:196733/1‑147 (MQ=255) ccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACttt < 4:13558/151‑1 (MQ=255) ccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACttt < 1:19399/151‑1 (MQ=255) cATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTTAACAACTTGGGTTCTCCCAAAAGCAGGG‑CTTTTTCTCtttt > 2:927652/1‑151 (MQ=255) aTGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTCTTCG‑TTTAACAGCCTTGATTCTCCCAAGAGGAGGG‑TTTTTTTACctttt > 3:342012/1‑150 (MQ=255) tGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCC‑TTTAAAACCTTGGGTTTTCCCAAAAGCAGGC‑TTTTTTTCCtttt > 4:278148/1‑149 (MQ=255) ggggATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTgg < 2:1212720/150‑1 (MQ=255) gggATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTg < 2:725684/151‑1 (MQ=255) gATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAAAAAGTTTGG‑TTTTCCCAAGAGGAGGC‑TTTTTTTACtttttggggt > 4:365572/1‑145 (MQ=255) aTGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCtt < 2:497397/151‑1 (MQ=255) tgcAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCG‑TTTAACAGCTTGGGTTCTCACAAGAGCAGGG‑GTTTTTCACTTTTTGTGCtttt > 4:1004526/1‑149 (MQ=255) gcagcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTT‑TTTAAAAACTTTGAGTTTCACAAGAGAAGGG‑TTTTTTTTCTTTTTTTGTttttttt > 1:94604/1‑148 (MQ=255) gcagcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTtg < 4:65890/149‑1 (MQ=255) cagcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTCTTC‑‑TTAAACAAATTGGGGTTTCTCAAGAGGAGGC‑GTTTGTTACTTTTTGGGCtttttgt > 4:812790/1‑147 (MQ=255) cagcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTtgctg < 4:731513/151‑1 (MQ=255) agcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTtgctgc < 4:150227/151‑1 (MQ=255) agcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTtgctgc < 2:1092838/151‑1 (MQ=255) gcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTgcg < 2:1282859/151‑1 (MQ=255) caACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTgcgc < 4:963668/151‑1 (MQ=255) aaCCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TCTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCt < 4:492260/151‑1 (MQ=255) aCCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTTTTCG‑GTGAAAAACTTTGGTTTTTACAAAAAGAGGC‑CTTTTTTACTTTTTGGGCTTTtgct > 3:440887/1‑145 (MQ=255) tCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTG‑TTTAAAAAATTTGGTTTTCACAAAAGGAGGG‑TTTTGTTTCTTTTTGGGCGTTTTTTGCGCTgg > 2:1365244/1‑149 (MQ=255) cGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGt < 4:710381/149‑1 (MQ=255) cGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGt < 2:340166/149‑1 (MQ=255) cGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTc < 2:622617/150‑1 (MQ=255) cccATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTAt < 2:101183/151‑1 (MQ=255) ccATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCG‑TTTAAAAACATGGGTTCTCACAAAAAGAAGG‑TTTTTTTTCTTTTTGTGTTTTTTCTGCGCTgggttat > 2:1366624/1‑145 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTT‑TTTAACAGCTTGGGTTTTCCCAAGAGCAGGC‑TTTTTTCACTTTTTGTGTTTTTTCTGCGCTGGGCTTTgg > 1:345555/1‑151 (MQ=255) ttCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTc < 4:610842/150‑1 (MQ=255) tCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCa < 4:1409138/150‑1 (MQ=255) cATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCAt < 4:1558361/150‑1 (MQ=255) cATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTTTTTG‑TTTAACAGCTTTGGTTCTCACAAAAACAGGG‑TTTTTTGTATTTTTGTGCTTTTTTTGCGCTgggttttgggctcctt > 2:1369610/1‑137 (MQ=255) tttttGTCGAGTTATGGGAGCTATTCGGCTACTACGGCGTTCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGTATTCTCTCAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCAtt < 4:1207139/149‑1 (MQ=255) tttttGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCAtt < 4:779562/149‑1 (MQ=255) tttttGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCAt < 3:381585/148‑1 (MQ=255) tGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTTG‑TTTAAAAGCTTTGGTTCTCCCAAAAGCAGGCGTTTTTTCCCTTTTGG‑GCTTTTTCTGCGCTGGTCTATTGGCTCCTTTCCATTtgcgg > 4:1017990/1‑150 (MQ=255) gTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTggcggc < 2:1527098/150‑1 (MQ=255) gAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑CTTTTTTCG‑TTTAACAACTTGGGTTTTCACAAGAACCGGG‑GTTTTTTACTTTTTGTGATTTTTGTGCCCTGGGCTATGGCCCCCttttcctttgggg > 4:1105490/1‑136 (MQ=255) aGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGt < 4:1075229/151‑1 (MQ=255) gTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTc < 2:1072901/151‑1 (MQ=255) gTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTc < 3:55755/151‑1 (MQ=255) tATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCg < 4:1139775/150‑1 (MQ=255) aTGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTG‑TTTAAAAACTTGGGTTTTCCCAAAAGCAGGG‑TTTTTTTACTTTTTGTGCTTTTTTTTCGCTGGTCTATTGCCTCCTTTTCATTtgcgggctttttgg > 4:776516/1‑141 (MQ=255) tGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTG‑TTTAACAGCTTGGAATCTCACAAAAGCAGGG‑TTTTTTCACTTTTTGTGGTTTTTCTGCGCTGGGCTTTGGCCTCCTTTTCATTggggggctttttggcg > 3:453612/1‑140 (MQ=255) gggAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑g < 2:1337490/150‑1 (MQ=255) actacGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTgggg < 2:1353211/149‑1 (MQ=255) actacGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGAc < 3:314543/151‑1 (MQ=255) acGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCa < 2:496521/150‑1 (MQ=255) ggCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCG‑TTAAACAGCCTTGATTCTCACAAGAGCAGGC‑GTTTGTCACTTTTTGTGCTTTTTCTGCGCTGGGCTATGGCCTCATTTCCATTGGGGGGTATGTCGGC‑GACCACCCCCTGGGGGCCcaa > 3:467741/1‑150 (MQ=255) cAGGGCGTACTGGC‑GG‑TTTTTTTCG‑TTAAAAAGCTTGGATTCTCCCAAAAGCCAGC‑TTTTGTCACTTTTTGTGGTTTTTCTTCGCTGGTCTATGGCCCCCTTTTCCTTGGCGGGCTTTTCGGCGGCCCACCTCCGGGGGCCCaacccccc > 2:1015515/1‑144 (MQ=255) cAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCGATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCa < 1:213286/151‑1 (MQ=255) gCGTACTGGC‑GG‑TTTTCTTTG‑TTTAAAAGCATTGGTTCTCCCAAGAGCAGGC‑GTTTGTTACTTTTTGGGGTTTTGTTGCGCCGGGCTATGGCCCCATTTTCATTTGCGGGGATTTTGGC‑GGCCACCCGCTGGGGGGCAcacccacc > 2:629689/1‑146 (MQ=255) cGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGtt < 4:1560922/151‑1 (MQ=255) cGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGtt < 2:1606566/151‑1 (MQ=255) aCTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCtt < 4:1000527/151‑1 (MQ=255) cTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCtt > 4:571993/1‑150 (MQ=255) tGGC‑GG‑TTTTCTTCG‑TTAAACCGCTTGGATTCTCACCAGAGCAGGC‑TTTTGTCCCTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGGTCTGTCGGC‑GGCCCCCTTCTGGGGGCCCAACACACCaattgtctttg > 2:795929/1‑141 (MQ=255) ggC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAATGCACCATTGTTCTTGGa < 4:864072/151‑1 (MQ=255) ggC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTg < 3:41941/149‑1 (MQ=255) ggC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGa < 4:1186106/151‑1 (MQ=255) gC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAg < 3:423440/151‑1 (MQ=255) c‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGc > 4:1528412/1‑151 (MQ=255) g‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCAc < 4:460424/151‑1 (MQ=255) ttcttaG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTtg > 3:19291/1‑151 (MQ=255) cG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTg < 4:330366/151‑1 (MQ=255) cG‑TTAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTg < 2:212477/151‑1 (MQ=255) ttAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCt > 2:1418145/1‑148 (MQ=255) tAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGc < 4:1676134/150‑1 (MQ=255) tAAACAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCg > 2:944432/1‑151 (MQ=255) aaaCAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCg < 4:921605/150‑1 (MQ=255) aaaCAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGa < 3:321155/151‑1 (MQ=255) aaaCAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑CACCACCTGCTGGGGACCAAAAGCCCCACTGTTCTTGGAGCACTTGTGCTGGCg > 2:709880/1‑150 (MQ=255) aCAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGAtt < 1:126387/151‑1 (MQ=255) aCAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGAtt > 4:1607554/1‑151 (MQ=255) cAGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTg > 4:1299443/1‑151 (MQ=255) aGCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTg < 2:811713/150‑1 (MQ=255) gCTTGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGc < 2:694749/151‑1 (MQ=255) cTTCGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTgg > 1:445521/1‑149 (MQ=255) ttGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCt > 1:228560/1‑150 (MQ=255) ttGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCt > 2:15764/1‑150 (MQ=255) tGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCTa < 4:619359/150‑1 (MQ=255) tGGATTCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCTa < 4:84980/150‑1 (MQ=255) ttCTCACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTg < 1:296262/121‑1 (MQ=255) tctcACAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCTACTTCAt > 4:591167/1‑151 (MQ=255) | AAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCG‑TTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGC‑GACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCTACTTCAT > NC_000913/3640858‑3641151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |