Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 592,031 T→C Y383C (TAT→TGT)  nfrB ← bacteriophage N4 receptor, inner membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913592,0310TC100.0% 406.1 / NA 107Y383C (TAT→TGT) nfrBbacteriophage N4 receptor, inner membrane subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (60/47);  total (60/47)

Only 100 of 109 total aligned reads displayed.

CGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCATACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTGGAAAACA  >  NC_000913/591883‑592177
                                                                                                                                                    |                                                                                                                                                  
cGTCAGGCCGTAGTAGCCAGTAACGAAAATCGCCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCacac                                                                                                                                                  >  4:1089440/1‑151 (MQ=255)
cGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCacac                                                                                                                                                  >  2:854946/1‑151 (MQ=255)
  tCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGc                                                                                                                                                >  2:1382353/1‑151 (MQ=255)
   cAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGcc                                                                                                                                               >  4:1257158/1‑151 (MQ=255)
       ccGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCcagca                                                                                                                                           <  2:924404/151‑1 (MQ=255)
        cGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCcagca                                                                                                                                           >  4:1418198/1‑150 (MQ=255)
        cGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCcagca                                                                                                                                           >  4:468290/1‑150 (MQ=255)
           agtagCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCcagcaaca                                                                                                                                        <  2:848494/150‑1 (MQ=255)
              agCCAGTAACGAAAATCCCCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCcagcaacagca                                                                                                                                     <  1:427075/150‑1 (MQ=255)
               gCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATCAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCaaa                                                                                                                                   <  2:208448/151‑1 (MQ=255)
                      aCGAAAATCACCCGCTGCACGATGCGGTTACCCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGa                                                                                                                            <  4:378930/151‑1 (MQ=255)
                       cGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGat                                                                                                                           >  2:872314/1‑151 (MQ=255)
                       cGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGat                                                                                                                           >  1:286653/1‑151 (MQ=255)
                         aaaaTCTCCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGatca                                                                                                                         <  1:28380/151‑1 (MQ=255)
                         aaaaTCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGatca                                                                                                                         <  2:1200410/151‑1 (MQ=255)
                           aaTCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGatcatc                                                                                                                       <  4:1154781/151‑1 (MQ=255)
                           aaTCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGatcatc                                                                                                                       >  4:478072/1‑151 (MQ=255)
                              cACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCAcc                                                                                                                    >  2:1598318/1‑151 (MQ=255)
                               aCCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCAcc                                                                                                                    >  2:1651565/1‑150 (MQ=255)
                                cccGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCa                                                                                                                   <  2:1064037/150‑1 (MQ=255)
                                cccGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCa                                                                                                                   <  4:1395424/150‑1 (MQ=255)
                                  cGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGc                                                                                                                 >  2:617097/1‑150 (MQ=255)
                                    cTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTACCCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCag                                                                                                               <  1:43427/150‑2 (MQ=255)
                                    cTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATc                                                                                                              >  3:155757/1‑151 (MQ=255)
                                      gCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATc                                                                                                              <  4:119575/149‑1 (MQ=255)
                                       cACGATGCGGTTACCCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATcgcg                                                                                                           <  2:601972/151‑1 (MQ=255)
                                         cGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAg                                                                                                         <  4:804398/151‑1 (MQ=255)
                                          gATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAgg                                                                                                        >  4:391132/1‑151 (MQ=255)
                                           aTGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAgg                                                                                                        >  2:1361092/1‑150 (MQ=255)
                                           aTGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGa                                                                                                       <  2:1109381/151‑1 (MQ=255)
                                           aTGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGa                                                                                                       <  3:51802/151‑1 (MQ=255)
                                            tGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGa                                                                                                       <  2:1050346/150‑1 (MQ=255)
                                            tGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGa                                                                                                       >  1:376268/1‑150 (MQ=255)
                                             gCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGa                                                                                                       >  4:1659366/1‑149 (MQ=255)
                                                 ttAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTg                                                                                                  >  4:1318374/1‑150 (MQ=255)
                                                  tAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGa                                                                                                 <  2:898946/150‑1 (MQ=255)
                                                   aaCCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCTGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGAc                                                                                                >  4:356252/1‑150 (MQ=255)
                                                    aCCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACaa                                                                                              <  2:1475496/151‑1 (MQ=255)
                                                           aaCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACt                                                                                       <  2:231295/151‑1 (MQ=255)
                                                            aCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTg                                                                                      <  4:1533011/151‑1 (MQ=255)
                                                             ccAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGa                                                                                     <  4:108560/151‑1 (MQ=255)
                                                                   tttAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGccc                                                                               >  2:617353/1‑151 (MQ=255)
                                                                     tAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCt                                                                             >  4:1071628/1‑151 (MQ=255)
                                                                      aGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGcccca                                                                             <  2:434934/150‑2 (MQ=255)
                                                                       gCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCttt                                                                           <  2:1370647/151‑1 (MQ=255)
                                                                         cacaGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGc                                                                         >  4:1134143/1‑151 (MQ=255)
                                                                         cacaGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGc                                                                         >  3:399853/1‑151 (MQ=255)
                                                                         cacaGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGc                                                                         >  4:1268346/1‑151 (MQ=255)
                                                                          acaGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCg                                                                        <  4:1139291/151‑1 (MQ=255)
                                                                           cagcagGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCgg                                                                       >  4:1390136/1‑151 (MQ=255)
                                                                              cagGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTcg                                                                    >  2:515223/1‑151 (MQ=255)
                                                                              cagGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTcg                                                                    >  2:1595030/1‑151 (MQ=255)
                                                                              cagGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTc                                                                     <  2:1615377/150‑1 (MQ=255)
                                                                               agGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTcgc                                                                   >  2:1676413/1‑151 (MQ=255)
                                                                                gggTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTcgcg                                                                  >  4:285260/1‑151 (MQ=255)
                                                                                   tCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGcc                                                                >  2:1022727/1‑150 (MQ=255)
                                                                                     aTTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGcc                                                                >  3:309909/1‑148 (MQ=255)
                                                                                      ttAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCag                                                              >  1:207799/1‑149 (MQ=255)
                                                                                       tAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCagag                                                            <  2:880650/150‑1 (MQ=255)
                                                                                       tAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCag                                                              >  1:354386/1‑148 (MQ=255)
                                                                                           cATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAagt                                                       >  2:7809/1‑151 (MQ=255)
                                                                                           cATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAagt                                                       >  4:237022/1‑151 (MQ=255)
                                                                                            aTGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAagt                                                       >  1:405500/1‑150 (MQ=255)
                                                                                               cgcTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGtt                                                   >  4:1477840/1‑151 (MQ=255)
                                                                                               cgcTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGtt                                                   <  2:1642816/151‑1 (MQ=255)
                                                                                                 cTGCCGCTGAAAATAGAAAGGAAATGCCGGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTc                                                  >  3:236052/1‑150 (MQ=255)
                                                                                                   gCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGc                                               >  1:3571/1‑151 (MQ=255)
                                                                                                      gCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTc                                            <  1:398484/151‑1 (MQ=255)
                                                                                                      gCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTc                                            >  2:1084957/1‑151 (MQ=255)
                                                                                                       cTGAAAATATAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTc                                            <  4:152324/150‑1 (MQ=255)
                                                                                                        tGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTc                                            >  4:1334624/1‑149 (MQ=255)
                                                                                                         gAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAg                                          <  2:1255575/150‑1 (MQ=255)
                                                                                                           aaaTAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCt                                       >  2:543511/1‑151 (MQ=255)
                                                                                                               aGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAg                                   <  4:1653571/151‑1 (MQ=255)
                                                                                                                 aaaGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAgg                                  <  2:60667/150‑1 (MQ=255)
                                                                                                                   aGGAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTcc                               >  4:717070/1‑151 (MQ=255)
                                                                                                                    ggAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTcc                               >  3:7833/1‑150 (MQ=255)
                                                                                                                     gAAATGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCAt                             >  2:315429/1‑151 (MQ=255)
                                                                                                                      aaaTGCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCAtt                            <  4:1085308/151‑1 (MQ=255)
                                                                                                                          gCCAGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATg                        >  4:1189806/1‑151 (MQ=255)
                                                                                                                            taGGCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATggg                      >  2:669424/2‑151 (MQ=255)
                                                                                                                              ggCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGtt                    <  2:467640/151‑1 (MQ=255)
                                                                                                                              ggCATCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGtt                    >  4:1064943/1‑151 (MQ=255)
                                                                                                                                 aTCGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGtttt                  <  4:1679674/150‑1 (MQ=255)
                                                                                                                                   cGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTaaa               <  4:519646/151‑1 (MQ=255)
                                                                                                                                   cGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTaaa               <  2:738110/151‑1 (MQ=255)
                                                                                                                                   cGGGCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTaa                <  2:269458/150‑1 (MQ=255)
                                                                                                                                    gggCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTaa                >  2:941967/1‑149 (MQ=255)
                                                                                                                                    gggCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAg              <  4:540401/151‑1 (MQ=255)
                                                                                                                                     ggCCACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGc             >  4:854197/1‑151 (MQ=255)
                                                                                                                                       ccACAAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCt           <  3:207814/151‑1 (MQ=255)
                                                                                                                                         acaAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTg         >  4:1387063/1‑151 (MQ=255)
                                                                                                                                          caAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTgg        >  3:365501/1‑151 (MQ=255)
                                                                                                                                          caAACTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTgg        >  4:518137/1‑151 (MQ=255)
                                                                                                                                            aaCTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTGGa       >  2:1115350/1‑150 (MQ=255)
                                                                                                                                            aaCTTTCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTGGa       >  1:254654/1‑150 (MQ=255)
                                                                                                                                                ttCACACGCCAGCAACAGCGAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTGGAAAAc   <  4:637864/150‑1 (MQ=255)
                                                                                                                                                ttCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTGGaaaa    <  2:203590/149‑1 (MQ=255)
                                                                                                                                                 tCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTGGAAAACa  <  3:436541/150‑1 (MQ=255)
                                                                                                                                                 tCACACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTGGAAAACa  >  1:43440/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCATACGCCAGCAACAGCAAAAGCTGGATCATCACCAGCATCGCGAGGAAGCTGACAAAGTTACTGATTGCCCCTTTGCGGTCGCGCCAGAGAAAGTAGTTCAGCGTCAGGCTGGAGGTCCATTTATGGGTTTTAAAGCCTTGGAAAACA  >  NC_000913/591883‑592177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑