| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,982,684 | (C)8→10 | noncoding (79/87 nt) | leuT → | tRNA‑Leu |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,982,676 | 1 | . | C | 98.1% | 374.2 / ‑0.9 | 105 | noncoding (71/87 nt) | leuT | tRNA‑Leu |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (46/57); total (47/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
| * | NC_000913 | 3,982,676 | 2 | . | C | 92.4% | 357.4 / 23.4 | 105 | noncoding (71/87 nt) | leuT | tRNA‑Leu |
| Reads supporting (aligned to +/- strand): ref base . (5/3); new base C (42/55); total (47/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.50e-01 | |||||||||||
Only 100 of 123 total aligned reads displayed.
TGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTG > NC_000913/3982526‑3982817 || tGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑t > 1:241459/1‑151 (MQ=255) ggTAGAGCGCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACACCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑t < 1:536850/150‑1 (MQ=255) agCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGTGTTCAAG‑‑T‑‑‑ccccc‑‑c < 4:212960/151‑1 (MQ=255) gCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑cc < 4:272439/151‑1 (MQ=255) cccTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑ccc < 4:290483/151‑1 (MQ=255) cccTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑ccc > 2:1099120/1‑151 (MQ=255) ccTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑cccc > 1:803421/1‑150 (MQ=255) ccTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑cccc > 1:905960/1‑150 (MQ=255) cTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑cccct > 3:365237/1‑149 (MQ=255) tGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑ccccc > 1:899752/1‑148 (MQ=255) ggATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑ccccct < 1:248766/150‑4 (MQ=255) ggATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑ccccc > 1:572483/1‑147 (MQ=255) gATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCCCCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑ccccctcg < 1:716224/151‑6 (MQ=255) gATTGTGATTCCAGGTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑ccccctc < 3:24154/150‑5 (MQ=255) aTTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc‑‑ccccctcg > 2:165883/1‑145 (MQ=255) gtgATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCC‑‑CCCTCGcacc > 4:402131/1‑150 (MQ=255) aTTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACg < 1:1136682/151‑1 (MQ=255) ccAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCCCGACt > 1:924548/1‑151 (MQ=255) cAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACtt < 2:1212109/151‑1 (MQ=255) aGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACttt < 3:301872/151‑1 (MQ=255) gTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTa < 2:770833/151‑1 (MQ=255) cGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGa > 1:1093107/1‑150 (MQ=255) gggTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTg < 2:1170345/151‑1 (MQ=255) ggTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGa < 4:391066/151‑1 (MQ=255) gTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGa < 1:1029836/150‑1 (MQ=255) ttCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGaa > 2:752736/1‑150 (MQ=255) tCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAAc < 3:306584/150‑1 (MQ=255) tCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACt > 2:759107/1‑151 (MQ=255) cGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACt > 4:318536/1‑150 (MQ=255) cGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACt > 4:164212/1‑150 (MQ=255) aaTCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTaa > 4:124838/1‑150 (MQ=255) aaTCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTaaa > 4:439530/1‑150 (MQ=255) aTCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTaaaa < 3:201688/151‑1 (MQ=255) aTCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTaaaa < 2:553576/151‑1 (MQ=255) aTCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTaaa > 3:251318/1‑150 (MQ=255) cccATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGGCC‑‑‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAt < 2:458600/151‑1 (MQ=255) cccATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGAGGCGGAATTGGTAGACGAGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCTCCCTCGCACCACCACTTTAAAGAATTGAACTaaaa > 1:107159/1‑149 (MQ=21) cATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAtt > 1:235263/1‑150 (MQ=255) tAGCCCCCCCATTTTTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTTGTAGACGCGCCTGCTTCAGGTTTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCCCCCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCa < 2:228342/150‑1 (MQ=21) aGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaa < 2:1274775/150‑1 (MQ=255) gCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaaaa < 2:796296/151‑1 (MQ=255) gCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaaaa < 1:965144/151‑1 (MQ=255) cACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGGAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaaaa < 2:672483/149‑1 (MQ=255) cccATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGt < 1:1280433/151‑1 (MQ=255) cccATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGt > 4:123117/1‑151 (MQ=255) ccATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGt > 2:28266/1‑150 (MQ=255) ccATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGt < 1:28271/150‑1 (MQ=255) ccATTATTAGAAGTTGTGACAATGCGAAGGGGGCGGAATTTGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAg < 1:818015/149‑1 (MQ=25) attattAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAtt < 2:1092803/151‑1 (MQ=255) ttattaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAATGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAtt < 2:8613/150‑1 (MQ=255) tattaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAttt < 2:662101/150‑1 (MQ=255) attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTc < 2:753201/150‑1 (MQ=255) attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTc < 2:376107/150‑1 (MQ=255) attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCg < 1:994642/151‑1 (MQ=255) ttaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCgg > 2:526888/1‑151 (MQ=255) taGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCgg < 2:637566/150‑1 (MQ=255) taGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCgg < 3:57546/150‑1 (MQ=255) taGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGc > 2:1122187/1‑151 (MQ=255) aGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCg > 1:1280967/1‑151 (MQ=255) tgtgACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGGGt > 1:7379/1‑148 (MQ=255) gtgACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgcg > 1:397179/1‑151 (MQ=255) gtgACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgc < 1:11617/150‑1 (MQ=255) tgACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgcgc > 4:287376/1‑151 (MQ=255) cAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCt > 1:979566/1‑151 (MQ=255) aTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCtt < 4:370982/151‑1 (MQ=255) tGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTg > 1:73245/1‑151 (MQ=255) gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGa < 4:130937/106‑1 (MQ=255) gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGa > 3:130936/1‑106 (MQ=255) gAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCCCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGt > 3:259673/1‑150 (MQ=255) aaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGt > 4:11409/1‑149 (MQ=255) tGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAgcgc > 2:278378/1‑150 (MQ=255) gCGGAATTGGTAGACGCGCTAGCTTCAGGGGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTACCACCACGACTTTAAAAAATAAAACTAAAAAATAAAAAAGCAGGATTTCGGCGAGTATCGCAGCTTTGTaaggca > 2:1186858/1‑144 (MQ=17) ggAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTg < 3:154359/151‑1 (MQ=255) aaTTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGt > 2:621409/1‑151 (MQ=255) tGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGttt < 2:195909/150‑1 (MQ=255) aCGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGAcc > 2:346075/1‑150 (MQ=255) gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTgg > 2:300146/1‑151 (MQ=255) tAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGt > 2:672811/1‑151 (MQ=255) gCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCg > 2:861712/1‑151 (MQ=255) tCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGGGGGTCgg > 2:371297/1‑149 (MQ=255) aGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGt < 2:69364/151‑1 (MQ=255) gtgtTAGTGTCCTTACGGACGTTGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAACAAGCAGTATTTCGGCGAAGAGCGCACCTTGGTAGGGAAACGGGATTGGGCCCAGTGGGACGGTGGTTc > 2:830693/1‑151 (MQ=25) gtTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCg < 4:343378/150‑1 (MQ=255) gtTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGa < 1:930833/151‑1 (MQ=255) gtTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCg > 1:480552/1‑149 (MQ=255) tAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGaa < 2:1006704/150‑1 (MQ=255) tAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAAt > 1:74057/1‑151 (MQ=255) aGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAAt < 2:230258/150‑1 (MQ=255) gtCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCctc > 3:175551/1‑151 (MQ=255) gtCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCctc > 4:34502/1‑151 (MQ=255) tCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCct < 1:1044423/149‑1 (MQ=255) tACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCctctct < 2:1226568/149‑1 (MQ=255) cGGACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGcc > 3:157219/1‑151 (MQ=255) gACGTGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGa < 2:572372/151‑1 (MQ=255) tGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGGGTCCTCTCTCGCCGACCa > 2:5876/1‑150 (MQ=255) tGGGGGTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCa > 3:378600/1‑150 (MQ=255) ggggTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAAtt < 1:1191513/151‑1 (MQ=255) ggTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAAtttt < 1:216060/151‑1 (MQ=255) ggTTCAAG‑‑TC‑‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTg < 2:89903/151‑1 (MQ=255) gTTCAAG‑‑TCC‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTg > 4:56066/1‑151 (MQ=255) || TGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGTGGGTTCGAATCCCATTAGCCACCCCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCC‑‑CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTG > NC_000913/3982526‑3982817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |