| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 213,341 | 0 | A | G | 41.3% | 121.5 / 11.4 | 75 | G337G (GGA→GGG) | tilS | tRNA(Ile)‑lysidine synthetase |
| Reads supporting (aligned to +/- strand): ref base A (9/35); new base G (31/0); total (40/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.52e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCG > NC_000913/213192‑213486 | gATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGaa < 3:23006/151‑1 (MQ=255)gATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGaa < 1:745598/151‑1 (MQ=255) tGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAg > 1:451189/1‑150 (MQ=255) gCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAgt < 1:1096495/150‑1 (MQ=255) cTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAgggt > 1:851496/1‑150 (MQ=255) cACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGTGG‑CTGGGAAGTGTa < 4:180418/149‑1 (MQ=255) cACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑a < 4:339187/151‑1 (MQ=255) cccTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑Ag < 3:442125/150‑1 (MQ=255) ccTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGGAGGGGAC‑Ag > 1:58035/1‑149 (MQ=255) tGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGGAGGGTAA‑AGCt > 1:1236821/1‑149 (MQ=255) ttttACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGGAC‑AGCtt > 1:1089219/2‑149 (MQ=255) gTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGTGTAC‑AGCtt > 1:548467/1‑149 (MQ=255) tttACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTAC‑AGCCTaa > 1:813406/1‑150 (MQ=255) ttACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGGAGGGGAC‑AGCTTAAt > 4:406539/1‑150 (MQ=255) ttACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAAt < 1:114347/150‑1 (MQ=255) tACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAggggaacggctta > 3:438358/1‑136 (MQ=255) tACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTAA‑AGCTTaa > 1:51898/1‑148 (MQ=255) tACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGGTC‑AGCTTaa > 2:1045946/1‑148 (MQ=255) cGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTAC‑AGCTTTATGCgg > 1:438161/1‑151 (MQ=255) tGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAg < 1:1028367/150‑1 (MQ=255) gggCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAgg < 4:106284/150‑1 (MQ=255) gcgcGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGGAC‑AGCTTAAAGCGGGAGGCg > 1:559609/1‑150 (MQ=255) gcgcGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAgggg > 1:880040/1‑148 (MQ=255) gcgTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTAC‑AGCTTAATGCGGGAGGCGat > 4:364088/1‑150 (MQ=255) cgTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGGAGAGGAA‑AGCTTAATGCGGGGGGCGata > 3:156183/1‑150 (MQ=255) gAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGcc < 2:198158/151‑1 (MQ=255) ccGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTAC‑AGCTTTATGCGGGGGGGGGTATTTGCCCTc > 4:428908/1‑149 (MQ=255) ccGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTcca < 2:499286/151‑2 (MQ=255) cGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGGAGGGTAA‑AGCTTAATGAGGGGGGCGAGATTCACCCTCcgcgcg > 1:1164660/1‑149 (MQ=255) tATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGTGTAA‑AGCTTAATGCGGGGGGCGATATTCGCCCCCCCCGTGccg > 4:381248/1‑149 (MQ=255) aTCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGGAC‑AGCTTAATGCGGGGGGGGGTATTCGCCCTCcgc > 4:287688/1‑144 (MQ=255) cAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGAc < 1:17141/150‑1 (MQ=255) cGCACCTGTGGTGCATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCCGCCGCTGGAATTGCCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGaa < 2:406120/149‑1 (MQ=255) cGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGc < 1:971539/151‑1 (MQ=255) gCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCg < 1:1261989/151‑1 (MQ=255) aCTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGAAGGGGACAACCTTAAT‑CGGGGGGGGGAACTCGCCCTCCCCCGGCAGAAGAAGCg > 4:448315/1‑148 (MQ=255) cTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGGAGGGGAC‑AACTTTATGCGGGGGGGGGAATTTTCCCTTCCCCGGCAGAAGAAGCgg > 1:966199/1‑148 (MQ=255) cTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGTGGAC‑AGCTTAATGCGGGAGGGGATATTTGCCCCCCGCGGGCAGACGGAGCgggt > 1:740091/1‑148 (MQ=255) tgtgGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGGAGGGGAC‑AGCTTTATGCGGGAGGGGGTATTCGCCCTCCGCGTGCAGACGAAGCgg > 4:373807/1‑147 (MQ=255) tggtggATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTAC‑AGCTTAATGCGGGGGGCGATATTCGCCCTCCGCGTGCAGAAGAAGAGGGCAgcg > 3:433143/1‑151 (MQ=255) aTTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTTA‑AACTTAATGCGGGGGGGGGTATTATCCCCCCCCGGGCAGAAGAAACGGGCAgcggggg > 2:1136678/1‑145 (MQ=255) tAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGTGTAC‑AGCTTAATGCGGGGGGGGATATTTGCCCTCCGCGGGCAGACGAAACGGTCAGCGCGC‑Ggtt > 1:77032/1‑150 (MQ=255) aaaTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GGGGGGAGGGGAA‑AGCTTAATGCGGGAGGCGATATTTGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑Gttt > 1:911544/1‑149 (MQ=255) aaaTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCa < 2:559504/151‑1 (MQ=255) aaTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGAAGAGGGA‑AGCTTTATGCGGGGGGGGATATTCGCCCCCCGCGCGCAGACGAAGCGGTCAGCGGGC‑Ggttta > 3:159413/1‑148 (MQ=255) aTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCaaa < 2:402471/151‑1 (MQ=255) ccGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAgc < 1:566592/151‑1 (MQ=255) tCACGGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGGGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAgc < 2:1068483/148‑1 (MQ=255) cACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGGGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGGGC‑GTTTCAAAACGcc > 4:45203/1‑150 (MQ=255) aCCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAg < 4:285569/151‑1 (MQ=255) ccGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAg < 2:664406/150‑1 (MQ=255) ccGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAg < 4:204999/150‑1 (MQ=255) cGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGa < 1:1272191/151‑1 (MQ=255) gggCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGAt < 1:724838/151‑1 (MQ=255) ggCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTAC‑AGCTTAATGCGGGGGGGGATATTTGCCCTCCGCGTGCCGACGAAGCGGGCAGCGGGC‑GGTTCTAAGCGCCCGGAtt > 4:290224/1‑151 (MQ=255) aaaGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATtgct < 2:114031/151‑1 (MQ=255) aaGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATtgctg < 4:51510/151‑1 (MQ=255) aaaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGTAC‑AGCTTAATTCGGGGGGGGGTATTTGCCCTCCCCGGGCAGACGAAGCGGGCAGCGGGC‑GGTTCAAAACGCCCGGGTTGCTGCat > 4:415015/1‑149 (MQ=255) aaaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCatat < 2:501918/151‑1 (MQ=255) aaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATAtt < 1:398378/151‑1 (MQ=255) aaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGAAGGGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCCCGTGCAGACGAAGCGGTCAGCGGGC‑GTTTCAAAGCGCCAGGATTGCTGCATAtt > 4:27909/1‑150 (MQ=255) cATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGGAGGGGAC‑AGCTTTATGCGGGGGGGGACATTCTCCCCCCGCGTGCAGACGGAGCGGTTAGCGGGCGGTTTCAAA‑AGCCCGGATTGCTGGat > 2:1046431/1‑145 (MQ=255) tgtgCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCgg < 1:1274913/150‑1 (MQ=255) gCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑GTGGGGAGTGTGG‑AGCTTAAATGGGGGGGGGGTATTCCCCCTCCGCGGGCAGACGAAGAGGTCCGCGTGC‑GTGTTCAAGCGCCCAGGGTGGTGGATATTGTCgggggg > 2:138317/1‑148 (MQ=255) ccGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTa < 1:71368/151‑1 (MQ=255) cGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCCCGGGAAAGCAAA‑ACACTAAT‑CGGGAGGCGATAATCGCCCTCCGCGGGCAGAGGAAGAGGGCCACCTGCGGTTTCAACCGCCCAGGA‑TGCTCGATATTGTcgcgcgg > 1:1275112/1‑148 (MQ=255) gCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAAcggc < 1:1246021/151‑1 (MQ=255) aGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAAcggcgg < 3:408015/151‑1 (MQ=255) aaCCGCTGGAATTACCGGCGGGG‑GTGGGGAGTGTAC‑AGCTTAATGCGGGAGGCGATATTTGCCCTCCGCGGGCAGACGAAGCGGGCCGCGTGC‑GGTTCAAAACGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGGCGTAAGGTaa > 1:160890/1‑150 (MQ=255) ccGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGa < 2:702877/151‑1 (MQ=255) ggAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAAt < 1:183743/150‑1 (MQ=255) ggcggGG‑CTGGGAAGTGGAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGG‑GTTTCAAAGCGCCAGGGTTGCTGCATATTGTCGGGCGTAACGGCGGACGGAAGCTTAAGAAAAttcggcca > 2:1215276/1‑141 (MQ=255) gcggGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGc > 1:261836/1‑151 (MQ=255) gggg‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTg > 2:641822/1‑151 (MQ=255) gggg‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTg < 2:1236597/151‑1 (MQ=255) gg‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTggg < 4:338762/151‑1 (MQ=255) gggAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCg < 1:490154/149‑1 (MQ=255) | GATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGG‑CTGGGAAGTGTAC‑AGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCG > NC_000913/213192‑213486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |