| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,405,949 | G→A | A231A (GCC→GCT) | lrhA ← | transcriptional repressor of flagellar, motility and chemotaxis genes |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,405,949 | 0 | G | A | 99.1% | 416.7 / NA | 113 | A231A (GCC→GCT) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (59/53); minor base C (1/0); total (60/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
CACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATCGGCTCGCCTTT > NC_000913/2405805‑2406095 | cACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCttt < 2:252172/150‑1 (MQ=255)cACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAAACCAGCttt > 2:1237857/1‑150 (MQ=255) aCCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGGAAACCATCTACTTCACTCAGCACACGCAGGTCCGGGCCCATCATCTCAACCGCCCTTGCCGTCACGCCAACACCAGCttt > 1:681977/1‑149 (MQ=255) ccTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCa < 2:181545/150‑1 (MQ=255) ccTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCAc < 2:501601/151‑1 (MQ=255) gggCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTg < 3:79753/150‑1 (MQ=255) ggCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGcc < 1:171219/151‑1 (MQ=255) ccAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGc < 1:34708/151‑1 (MQ=255) aGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCAc > 4:292618/1‑151 (MQ=255) gCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACg > 1:99619/1‑151 (MQ=255) cATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAAc < 2:203686/151‑1 (MQ=255) attattACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCCGGTCCGGGCTCATCATCTCAAACGGCCTTGCCGTCCCGCCAAAATCAGCTTTCACTGCCGCACGAAc > 1:816149/1‑150 (MQ=255) attattACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAACCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAAc > 1:1155932/1‑150 (MQ=255) attaCTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGc < 2:761836/150‑1 (MQ=255) ttaCTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGcc > 1:937897/1‑150 (MQ=255) taCTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTTACTGCCGCACCAACGGCCgg > 2:339791/1‑151 (MQ=255) ggACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGc < 4:316496/151‑1 (MQ=255) aCGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCg > 1:791107/1‑150 (MQ=255) aCGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGt < 2:461762/151‑1 (MQ=255) ggATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCCAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTc > 2:68184/1‑150 (MQ=255) cATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGGCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGGAGCGTCGAgg > 3:118617/1‑150 (MQ=255) aTAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGGCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCCAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAgg > 2:884977/1‑149 (MQ=255) gCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAgg > 2:1001472/1‑146 (MQ=255) gCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACa < 3:96022/151‑1 (MQ=255) gCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAACCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGc > 1:263810/1‑147 (MQ=255) cacaGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACa > 2:1090588/1‑150 (MQ=255) acaGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGGCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACAt > 2:1031868/1‑150 (MQ=255) caGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATaa < 3:232442/151‑1 (MQ=255) aGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATa > 4:242878/1‑149 (MQ=255) aGCAAATATTCGGTATCAGGTAGCGGCGGTAAACCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATa > 1:108652/1‑149 (MQ=255) aaaTATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCCCTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATaa > 4:336173/1‑147 (MQ=255) aaaTATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGcc > 2:965509/1‑150 (MQ=255) aaaTATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGGCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGTGGCGACATAAGcc > 1:1021346/1‑150 (MQ=255) aaTATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAg < 1:161921/151‑1 (MQ=255) ttCGGTATCAGGTAGCGGCGGTAAGACATCTACTCCACTCAGCACACGCAGGTCCGTGCTCCTCATCTCAACCAGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGGCGAAACGACAAAAGCCAGt > 3:89456/1‑148 (MQ=255) tCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGc < 1:617161/150‑1 (MQ=255) cGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGcc > 4:189687/1‑150 (MQ=255) cGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCa < 2:1203027/151‑1 (MQ=255) cGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTAACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCa < 2:522943/151‑1 (MQ=255) ggTATCAGGTAGCGGCGGTAAGCCCTCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGcc > 2:755174/1‑149 (MQ=255) gTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCCTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACCAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCCTg > 2:837066/1‑151 (MQ=255) aTCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATgg < 1:707484/150‑1 (MQ=255) tCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGa > 3:54053/1‑150 (MQ=255) cAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGaa < 2:930767/150‑1 (MQ=255) ggTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAatat < 2:141689/151‑1 (MQ=255) gTAGCGGCGGTAAGCCATCTACTCCACTCCGCACACCCAGGGCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCCAGACCCGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACCTAAGCCAGTCGCCACGGGatat > 3:125686/1‑150 (MQ=255) tAGCGGCGGTAAGCCCTCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCCTGGAatat > 2:978461/1‑149 (MQ=255) cggcggTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCt > 2:412929/1‑151 (MQ=255) gcggTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCttt < 2:347232/151‑1 (MQ=255) gcggTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCttt < 3:315592/151‑1 (MQ=255) gTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTttatt > 1:879528/1‑151 (MQ=255) gTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTttatt < 3:410308/151‑1 (MQ=255) gCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGc < 4:4357/151‑1 (MQ=255) ccATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCg > 2:308783/1‑151 (MQ=255) aTCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGt > 2:360637/1‑150 (MQ=255) aCTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCg < 2:60222/148‑1 (MQ=255) cTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc > 1:826809/1‑149 (MQ=255) cTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc > 1:958078/1‑149 (MQ=255) cTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc > 1:147566/1‑149 (MQ=255) tCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGc > 1:1127647/1‑151 (MQ=255) ccACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAg < 2:970076/149‑1 (MQ=255) ccACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGc < 1:1009262/150‑1 (MQ=255) ccACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCa < 2:543380/151‑1 (MQ=255) cAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCata < 2:1155722/151‑1 (MQ=255) cacaCGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg < 2:653455/151‑1 (MQ=255) cacaCGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg < 1:736886/151‑1 (MQ=255) acacGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcgc > 3:101881/1‑151 (MQ=255) gCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGaaa < 2:945420/151‑1 (MQ=255) aGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCCAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGACAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc > 1:918937/1‑150 (MQ=255) ggTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACgg > 4:68058/1‑151 (MQ=255) ccGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCt > 1:233545/1‑151 (MQ=255) cGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTa < 1:1121562/151‑1 (MQ=255) ggCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAgg > 2:772928/1‑151 (MQ=255) tcatcaTCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGatc > 2:55193/1‑151 (MQ=255) catcatCTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGatca < 1:1123423/151‑1 (MQ=255) atcatcTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGatcat > 2:123046/1‑151 (MQ=255) atcatcTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGatcat > 4:119949/1‑151 (MQ=255) tcatcTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGatcatc > 1:120729/1‑151 (MQ=255) atcTCAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAAGGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGATACGGGCTAGGatcatc > 1:866405/1‑149 (MQ=255) ctcAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGc > 2:1076412/1‑151 (MQ=255) tcAACCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGc > 1:1040717/1‑150 (MQ=255) aaCCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCTCCATATCGCGAAACGGGCTAGGATCATCCAg < 1:1172339/147‑1 (MQ=255) aaCCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAAt > 2:892167/1‑151 (MQ=255) aCCGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATa < 3:292614/151‑1 (MQ=255) ccGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATAc > 1:974057/1‑151 (MQ=255) ccGGCCTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATAc < 1:411398/151‑1 (MQ=255) cccTTGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGCGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAAt > 1:1265225/2‑146 (MQ=255) ttGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAgg > 2:815098/1‑151 (MQ=255) tGCCGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAagag < 2:525140/149‑1 (MQ=255) ccGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGAt < 3:74861/151‑1 (MQ=255) ccGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGAt < 1:35552/151‑1 (MQ=255) cGTCACGCCAAGGCCAGCTTCCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTAGTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGAATCATCCAGCAATACAAGAGGGATc < 2:895141/151‑1 (MQ=255) cGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATc > 3:214181/1‑151 (MQ=255) cGTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATc < 3:15888/151‑1 (MQ=255) gTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATCg < 2:263774/151‑1 (MQ=255) gTCACGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATCg < 4:114838/151‑1 (MQ=255) aCGCCAAGACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATCGGc > 1:1089184/1‑150 (MQ=255) aGACCAGCTTTCACGGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATCGGCTCGCCtt < 2:681838/151‑1 (MQ=255) gACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATCGGCTCGCCttt < 1:1198718/151‑1 (MQ=255) gACCAGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATCGGCTCGCCttt > 1:1227196/1‑151 (MQ=255) | CACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATCGGCTCGCCTTT > NC_000913/2405805‑2406095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |