Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,439,996 G→A R2C (CGC→TGC)  rplQ ← 50S ribosomal subunit protein L17

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,439,9960GA100.0% 435.6 / NA 109R2C (CGC→TGC) rplQ50S ribosomal subunit protein L17
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (62/47);  total (62/47)

Only 100 of 109 total aligned reads displayed.

CGGCTCAACTACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCGCATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTT  >  NC_000913/3439850‑3440141
                                                                                                                                                  |                                                                                                                                                 
cGGCTCAACTACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACAt                                                                                                                                                <  2:344279/150‑1 (MQ=255)
 ggCTCAACTACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATg                                                                                                                                               <  2:714864/150‑1 (MQ=255)
  gCTCAACTACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGAc                                                                                                                                             <  1:517222/151‑1 (MQ=255)
  gCTCAACTACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGAc                                                                                                                                             >  2:139781/1‑151 (MQ=255)
  gCTCAACTACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGAc                                                                                                                                             >  2:341270/1‑151 (MQ=255)
    tCAACTACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCt                                                                                                                                           >  1:1057398/1‑151 (MQ=255)
         tACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATcc                                                                                                                                      >  1:1074081/1‑151 (MQ=255)
              ggcgCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGACCCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTtct                                                                                                                                  <  2:421516/150‑1 (MQ=255)
              ggcgCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTtctc                                                                                                                                 >  1:106313/1‑151 (MQ=255)
               gcgcAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTtctc                                                                                                                                 >  2:352527/1‑150 (MQ=255)
               gcgcAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCa                                                                                                                                <  2:592330/151‑1 (MQ=255)
                       gtttCGCTTTAGGCAGCGTCGTCTTGCTGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAAcc                                                                                                                        >  2:35598/2‑151 (MQ=255)
                         ttCGCTTTAGGCAGTGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAAcca                                                                                                                       <  2:58748/150‑2 (MQ=255)
                         ttCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCt                                                                                                                       <  3:166962/150‑1 (MQ=255)
                         ttCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCt                                                                                                                       <  1:758050/150‑1 (MQ=255)
                          tCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCtt                                                                                                                      >  2:980795/1‑150 (MQ=255)
                            gCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAAc                                                                                                                   >  2:750484/1‑151 (MQ=255)
                            gCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAAc                                                                                                                   <  4:443305/151‑1 (MQ=255)
                              tttAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCt                                                                                                                 >  1:93830/1‑151 (MQ=255)
                                tAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCtgt                                                                                                               >  3:215501/1‑151 (MQ=255)
                                tAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCtgt                                                                                                               >  2:679107/1‑151 (MQ=255)
                                 aGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCtgtg                                                                                                              <  1:350426/151‑1 (MQ=255)
                                    cAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGAt                                                                                                            <  4:435760/150‑1 (MQ=255)
                                        gtcgtcTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGt                                                                                                       <  4:48488/151‑1 (MQ=255)
                                           gtcTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTAc                                                                                                    >  4:123170/1‑151 (MQ=255)
                                            tcTTGATGATTTCATGACGACCCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGtt                                                                                                      <  2:1060236/148‑1 (MQ=255)
                                            tcTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACt                                                                                                   >  4:288390/1‑151 (MQ=255)
                                             cTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTc                                                                                                  >  1:754312/1‑151 (MQ=255)
                                               tgatgaTTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGt                                                                                                >  3:46697/1‑151 (MQ=255)
                                                  tgatTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTc                                                                                               >  1:1107808/1‑149 (MQ=255)
                                                    atTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCg                                                                                           >  2:467835/1‑151 (MQ=255)
                                                    atTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCg                                                                                           >  1:35073/1‑151 (MQ=255)
                                                      ttCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGa                                                                                          <  1:614421/150‑1 (MQ=255)
                                                      ttCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGa                                                                                          <  4:33850/150‑1 (MQ=255)
                                                      ttCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGAt                                                                                         >  1:1243824/1‑151 (MQ=255)
                                                      ttCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGAt                                                                                         >  1:983721/1‑151 (MQ=255)
                                                        cATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGc                                                                                       >  1:701332/1‑151 (MQ=255)
                                                              gAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCg                                                                                 >  2:492394/1‑151 (MQ=255)
                                                               aaCCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCgg                                                                                >  1:1248874/1‑151 (MQ=255)
                                                                aCCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCgg                                                                                >  2:876581/1‑150 (MQ=255)
                                                                aCCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGt                                                                               >  2:88257/1‑151 (MQ=255)
                                                                 ccAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTg                                                                              >  1:1020830/1‑151 (MQ=255)
                                                                   aGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGc                                                                            >  2:15745/1‑151 (MQ=255)
                                                                    gTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTg                                                                              <  2:919758/148‑1 (MQ=255)
                                                                      gAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGcc                                                                           >  2:783103/1‑149 (MQ=255)
                                                                           tGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTc                                                                    >  4:42223/1‑151 (MQ=255)
                                                                            gCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTcc                                                                   >  1:38119/1‑151 (MQ=255)
                                                                             ccATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTcc                                                                   >  1:1167840/1‑150 (MQ=255)
                                                                               atatTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAgg                                                                <  1:1251671/151‑1 (MQ=255)
                                                                                tatTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAgg                                                                >  2:380013/1‑150 (MQ=255)
                                                                                 atTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGgcg                                                              >  2:884929/1‑151 (MQ=255)
                                                                                        aaCATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGccc                                                       <  2:1126381/151‑1 (MQ=255)
                                                                                                 tGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGt                                              >  3:56535/1‑151 (MQ=255)
                                                                                                 tGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGt                                              >  1:1071506/1‑151 (MQ=255)
                                                                                                    cGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTcc                                            >  4:102813/1‑150 (MQ=255)
                                                                                                    cGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTcc                                            >  2:701317/1‑150 (MQ=255)
                                                                                                      aTGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCAca                                         <  2:17373/151‑2 (MQ=255)
                                                                                                      aTGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACg                                         >  1:1006117/1‑151 (MQ=255)
                                                                                                        ggCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACggg                                       >  1:11874/1‑151 (MQ=255)
                                                                                                        ggCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACggg                                       >  4:332472/1‑151 (MQ=255)
                                                                                                        ggCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACgg                                        <  4:358081/150‑1 (MQ=255)
                                                                                                        ggCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACgg                                        <  1:465030/150‑1 (MQ=255)
                                                                                                         gctgctGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGa                                      <  2:543997/151‑1 (MQ=255)
                                                                                                           tgctgTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGa                                      >  1:186034/1‑149 (MQ=255)
                                                                                                            gctgTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGc                                   >  1:1242322/1‑151 (MQ=255)
                                                                                                            gctgTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGc                                   <  1:438062/151‑1 (MQ=255)
                                                                                                             ctgTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGcc                                  >  1:1153071/1‑151 (MQ=255)
                                                                                                             ctgTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGcc                                  >  3:14905/1‑151 (MQ=255)
                                                                                                              tgTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGcc                                  >  4:86353/1‑150 (MQ=255)
                                                                                                               gTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGcc                                  <  1:75046/149‑1 (MQ=255)
                                                                                                               gTTGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCa                                 <  1:88272/150‑1 (MQ=255)
                                                                                                                ttGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGc                               >  2:389987/1‑151 (MQ=255)
                                                                                                                 tGCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGc                               >  1:1272268/1‑150 (MQ=255)
                                                                                                                  gCGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCAc                             <  3:132068/151‑1 (MQ=255)
                                                                                                                   cGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACg                            <  1:1053257/151‑1 (MQ=255)
                                                                                                                   cGGTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACg                            <  3:446201/151‑1 (MQ=255)
                                                                                                                    ggTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGt                           <  1:1011479/151‑1 (MQ=255)
                                                                                                                    ggTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGt                           <  1:1217523/151‑1 (MQ=255)
                                                                                                                    ggTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTAGCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACg                            <  2:977722/150‑1 (MQ=255)
                                                                                                                     gTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTc                          >  3:332738/1‑151 (MQ=255)
                                                                                                                     gTTCAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTc                          <  1:392674/151‑1 (MQ=255)
                                                                                                                        cAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCttt                       >  4:86027/1‑151 (MQ=255)
                                                                                                                        cAGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCtt                        <  3:16368/150‑1 (MQ=255)
                                                                                                                         aGTTGACGACCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCttt                       >  1:964318/1‑150 (MQ=255)
                                                                                                                             gacgacCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAAtc                   <  1:665229/150‑1 (MQ=255)
                                                                                                                              acgacCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAAtctc                 <  3:206101/151‑1 (MQ=255)
                                                                                                                              acgacCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAAtctc                 >  4:73548/1‑151 (MQ=255)
                                                                                                                                gacCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAAtctc                 >  3:47960/1‑149 (MQ=255)
                                                                                                                                gacCACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAg               <  3:283000/151‑1 (MQ=255)
                                                                                                                                  ccACTCTTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTa             <  1:750639/151‑1 (MQ=255)
                                                                                                                                       ctTACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAaga          <  1:139803/149‑1 (MQ=255)
                                                                                                                                        ttACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAag           >  3:15584/1‑147 (MQ=255)
                                                                                                                                         tACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAagag         <  2:1254998/148‑1 (MQ=255)
                                                                                                                                         tACGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGAt       <  1:72480/150‑1 (MQ=255)
                                                                                                                                          aCGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGAttt     <  1:1221744/151‑1 (MQ=255)
                                                                                                                                          aCGATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGAtt      <  1:980448/150‑1 (MQ=255)
                                                                                                                                            gATGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGAttttt   <  1:881878/151‑1 (MQ=255)
                                                                                                                                             aTGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGAtttttt  <  2:1111678/151‑1 (MQ=255)
                                                                                                                                             aTGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGAtttttt  >  3:298955/1‑151 (MQ=255)
                                                                                                                                              tGGCACATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGAtttttt  >  2:487670/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
CGGCTCAACTACGCGGCGCAGCTCTTTCGCTTTAGGCAGAGTCGTCTTGATGATTTCATGACGAACCAGTGAACCTGCCATATTGCGGAACATAGCCTGGCGATGGCTGCTGTTGCGGTTCAGTTGACGACCACTCTTACGATGGCGCATGACCTTATCCTTCTCAGTAAAACCTTAACCTGTGATCCGGTTACTCGTCAGCGATGCTTGCCGGTGGCCAGTTTTCCAGGCGCATGCCCAGAGACAGTCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTT  >  NC_000913/3439850‑3440141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑