| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 949,117 | (T)5→4 | coding (452/909 nt) | ycaN ← | LysR family putative transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 949,113 | 0 | T | . | 91.9% | 344.0 / 16.7 | 87 | coding (456/909 nt) | ycaN | LysR family putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (7/0); new base . (39/40); total (47/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.34e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAAGGTTTGCCGCTGGGATAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATCTTTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATACGTG > NC_000913/948964‑949258 | aaaGGTTTGCCGCTGGGATAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATTGCCACGCCTATCCTAtttt > 1:806984/1‑151 (MQ=255) tGCCGCTGGGATAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATCttttcgac < 2:76341/150‑5 (MQ=255) tGCCGCTGGGATAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATCttttcgac < 2:922128/150‑5 (MQ=255) gggATAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCaa < 2:962012/150‑1 (MQ=255) gggATAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACCCTGATCATATCTTTTT‑GACGATGCaa > 1:631425/1‑150 (MQ=255) gATAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTa < 1:350000/151‑1 (MQ=255) aTAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATCTTTTT‑GACGATGCAACTa > 1:616066/1‑150 (MQ=255) aCGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGTCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTc > 2:629027/1‑151 (MQ=255) aCGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTc > 2:951535/1‑151 (MQ=255) cGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCg < 1:453987/151‑1 (MQ=255) gAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATCTTTTT‑GACGATGCAACTAAGTCg > 1:749012/1‑150 (MQ=255) gAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCg > 2:659001/1‑150 (MQ=255) gAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGa < 2:1116328/151‑1 (MQ=255) aaaaCAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAAc < 2:963455/151‑1 (MQ=255) aaaaCAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAAc < 1:1014456/151‑1 (MQ=255) aaaaCAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAAc < 2:695993/151‑1 (MQ=255) aaaaCAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCCCCACGCTGATCATATC‑TTTTCCACGATGCAACCAAGTCGaa > 1:1017496/1‑150 (MQ=255) aaaCAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGaa > 2:45460/1‑149 (MQ=255) aaaCAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAAc > 2:1181125/1‑150 (MQ=255) aaaCAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACg < 1:737434/151‑1 (MQ=255) aacaacACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGaa > 2:545223/1‑148 (MQ=255) aacaCATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAg < 2:1007804/151‑1 (MQ=255) acaTTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCg > 2:85792/1‑150 (MQ=255) acaTTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑t < 2:336047/151‑1 (MQ=255) aTTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCCCGCTGATCATATCTTTTT‑GACGATGCAACTAAGTCGAACGCCAACg > 1:952659/1‑148 (MQ=255) atgatTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATCTTTTT‑GACGATGCCACTAAGTCGAACGCCAGCG‑TCaaa > 2:722246/1‑149 (MQ=255) tAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCCCGCTGGTCATATCTTTTT‑GACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGccc > 1:13641/1‑148 (MQ=255) aaGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGtt > 2:661447/1‑151 (MQ=255) gATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACg > 1:451174/1‑151 (MQ=255) aTCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACg > 2:788000/1‑150 (MQ=255) aTCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGa < 2:257833/151‑1 (MQ=255) tCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGGACGCCACGCTTTACCTATC‑TTTTCGACCATGGCACTAAGTCTGACGCCCACG‑TCAAAGACCCGTTGGAc > 1:1152041/1‑148 (MQ=255) cATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGat > 1:808593/1‑150 (MQ=255) gAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCg < 1:441260/151‑1 (MQ=255) gATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACa < 1:959925/151‑1 (MQ=255) ggCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAag < 1:906445/150‑1 (MQ=255) gCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAagag < 1:709753/151‑1 (MQ=255) ggTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAgtc < 1:1155727/151‑1 (MQ=255) tttGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAgtcg > 2:144787/1‑150 (MQ=255) ccATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATAT‑ATTTTCGACGATGCAACTAAGGCGAACGCCATCG‑TCAAAGCCCTGTTGGACGATATCGGCAAGAGAGGCGTCAg > 2:1201340/1‑150 (MQ=255) cATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGtt < 1:977451/151‑1 (MQ=255) cATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGtt < 1:98394/151‑1 (MQ=255) atatCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGGCGATCGCCACCCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCCGTTTGACGATATCGACAAGAGAGTCGTCCGtt > 1:809261/1‑150 (MQ=255) tCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGACCGCCACGCCTATCATATCTTTTTGGA‑GATTCAACTTCATCGGACGCCAGCGCTCAATCCCCTTTTTG‑CGGTATACACAAAAGAGTCCTCCCTtgtg > 1:577920/1‑150 (MQ=255) cTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTtgtg > 2:178373/1‑149 (MQ=255) gCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCt < 2:661739/150‑1 (MQ=255) aaGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGAc < 1:179874/151‑1 (MQ=255) aaGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGACGAACGCCACGCTGGTCATATC‑CTTTCCAAGAAGCAACTAAATCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGAAATCGACAAGAAAGTCGTCAGGTGTGAGCCCGa > 1:50988/1‑150 (MQ=255) aGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCCATCGCCACGCTGCGCCAATC‑TTTTCGACGAATCTAAAAAATCGAACGCCAGCG‑CCAAAGCCCTCTTTGTGGATATCGACAATAGAGTCGTCAGTTGTGGGGTCgcgt > 1:618488/1‑148 (MQ=255) gTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACtt > 2:741334/1‑151 (MQ=255) gTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACtt < 2:675952/151‑1 (MQ=255) ggCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACCCTGATCATATC‑TTTTCGACGATGCAACAAAGTCGAAAGCCAGCG‑TCAAAACCCTCTTTGACGATTTCGGAAAGAGAGTCGTCTGTTGTGAGGTCGACTTTTatat > 2:569729/1‑150 (MQ=255) gCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCa < 1:341110/151‑1 (MQ=255) ttGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAATCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAAAGAGTCGTCAGTTGTGAGCTCGACTTTTATATCAgg > 2:143657/1‑150 (MQ=255) gctgctACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGat > 2:209823/1‑150 (MQ=255) gctgctACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGat < 1:464514/150‑1 (MQ=255) gctgctACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGat < 2:911620/150‑1 (MQ=255) gctACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGatat < 1:376688/149‑1 (MQ=255) gctACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATAtt < 1:579726/150‑1 (MQ=255) acaTAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACg > 2:1187834/1‑149 (MQ=255) aaTTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGaa < 2:35199/151‑1 (MQ=255) aTTTCACTGGCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGaaa < 1:226403/151‑1 (MQ=255) ggCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAaaccaacc < 2:800156/149‑1 (MQ=255) ggCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAaaccaacc > 2:1003840/1‑149 (MQ=255) ggCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAg < 2:736530/151‑1 (MQ=255) ggCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAg < 1:370709/151‑1 (MQ=255) gCGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCGACCAGt < 2:917107/151‑1 (MQ=255) cGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGt > 2:972682/1‑150 (MQ=255) cGGGCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTa < 1:609751/151‑1 (MQ=255) ggCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTaaa < 2:635551/151‑1 (MQ=255) gCCGATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAg < 1:478874/151‑1 (MQ=255) gATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGAc > 1:1007123/1‑150 (MQ=255) gATCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACa < 2:1183607/151‑1 (MQ=255) aTCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACAt > 2:234696/1‑151 (MQ=255) aTCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACAt < 2:862370/151‑1 (MQ=255) tCGCCACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACAtt > 1:156434/1‑151 (MQ=255) ccACGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTaa > 2:176964/1‑150 (MQ=255) cGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAat > 2:503667/1‑151 (MQ=255) cGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAat > 1:1144394/1‑151 (MQ=255) cGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAat > 1:552215/1‑151 (MQ=255) cGCTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAat > 2:1062334/1‑151 (MQ=255) cTGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAatat > 2:719958/1‑151 (MQ=255) tGATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAatat > 1:35715/1‑150 (MQ=255) gATCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATAc > 1:299327/1‑151 (MQ=255) aTCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATACg > 2:853919/1‑151 (MQ=255) aTCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATACg > 2:1116121/1‑151 (MQ=255) tCATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATACGt > 2:317236/1‑151 (MQ=255) cATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATACGta < 1:195243/151‑2 (MQ=255) cATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATACGt < 1:348178/150‑1 (MQ=255) cATATC‑TTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATACGTg < 2:83921/151‑1 (MQ=255) | AAAGGTTTGCCGCTGGGATAACGAAAAACAACACATTGATGATTAAGCAGATCATGAGGATGGCGGGGTTTGCCATATCTTGCAAAGTACTCTGGCGTTGCTGCTACACATAATTTCACTGGCGGGCCGATCGCCACGCTGATCATATCTTTTTCGACGATGCAACTAAGTCGAACGCCAGCG‑TCAAAGCCCTGTTGGACGATATCGACAAGAGAGTCGTCAGTTGTGAGCTCGACTTTAATATCAGGATATTCACGTGTGAAACCAACCAGTAAAGACATTAAAAATATACGTG > NC_000913/948964‑949258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |