Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,079,433	T→C	V46A (GTG→GCG)	yiiE →	CopG family putative transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,079,433	0	T	C	100.0%	306.7 / NA	85	V46A (GTG→GCG)	yiiE	CopG family putative transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (29/56);  total (29/56)

TGGTAATGGCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGTGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAGGCTGTTTT  >  NC_000913/4079286‑4079577                                                                                                                                                    |                                                                                                                                                 tGGTAATGGCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGgcgc                                                                                                                                                <  1:375913/150‑1 (MQ=255) tGGTAATGGCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGcgcg                                                                                                                                               >  1:945892/1‑151 (MQ=255)   gTAATGGCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGt                                                                                                                                              >  1:124451/1‑150 (MQ=255)     aaTGGCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTaaa                                                                                                                                           <  2:972078/151‑1 (MQ=255)     aaTGGCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTaaa                                                                                                                                           <  1:701480/151‑1 (MQ=255)        ggCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGc                                                                                                                                         <  1:737488/150‑1 (MQ=255)         gCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCa                                                                                                                                        >  1:196123/1‑150 (MQ=255)          cGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCaaa                                                                                                                                      <  2:1111077/151‑1 (MQ=255)            aTGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAgg                                                                                                                                    <  2:109026/151‑1 (MQ=255)            aTGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAgg                                                                                                                                    >  1:644625/1‑151 (MQ=255)            aTGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGAAACGTCAGCAATTCCCGGCGCGTAAAGCAAAgg                                                                                                                                    >  1:638351/1‑151 (MQ=255)             tGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAggg                                                                                                                                   >  1:74796/1‑151 (MQ=255)              gAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAggg                                                                                                                                   <  2:417124/150‑1 (MQ=255)              gAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAggg                                                                                                                                   <  1:251302/150‑1 (MQ=255)              gAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAggg                                                                                                                                   >  2:821840/1‑150 (MQ=255)              gAATACGGTTTTTCTTCATTTACCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAggg                                                                                                                                   >  2:400460/1‑150 (MQ=255)                  aCGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGaggca                                                                                                                              <  2:26490/151‑1 (MQ=255)                   cGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGaggcag                                                                                                                             <  1:4601/151‑1 (MQ=255)                   cGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGaggc                                                                                                                               >  1:813950/1‑149 (MQ=255)                     gTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGaggcagg                                                                                                                            >  1:367017/1‑150 (MQ=255)                        tttCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCaa                                                                                                                         <  1:1066743/150‑1 (MQ=255)                          tcttcATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCaaaa                                                                                                                       <  1:850669/150‑1 (MQ=255)                             tcATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAgg                                                                                                                     <  2:999646/149‑1 (MQ=255)                              cATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAggggg                                                                                                                  >  1:783197/1‑151 (MQ=255)                               aTTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGa                                                                                                                 <  1:272086/151‑1 (MQ=255)                                 ttATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAgg                                                                                                               >  1:1083509/1‑151 (MQ=255)                                   aTCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTa                                                                                                             <  2:116238/151‑1 (MQ=255)                                   aTCAGAAGAGGCAATTAAACGGATGAACAAGCATCGGGGCTGGCGTAAGGTTTCAGGATCTGAAATTTTACGCGAAGAGGTAGCGCAATAGCTGGAACGTCAGCAATTCACGGCGCGAAAAGCAAAGGGAGGCAGGACAAaggagg                                                                                                                  >  1:301628/1‑146 (MQ=255)                                    tCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGt                                                                                                              >  2:73609/1‑149 (MQ=255)                                       gaagaGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTg                                                                                                         >  1:1067801/1‑151 (MQ=255)                                         agagGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTgg                                                                                                        >  1:250674/1‑150 (MQ=255)                                          gagGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGgtg                                                                                                      <  2:1112015/151‑1 (MQ=255)                                           agGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGgtgt                                                                                                     <  1:64045/151‑1 (MQ=255)                                            ggCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGtt                                                                                                    <  2:989002/151‑1 (MQ=255)                                                    aaCGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATc                                                                                             >  1:969903/1‑150 (MQ=255)                                                     aCGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATc                                                                                             >  2:103612/1‑149 (MQ=255)                                                       ggCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAgtg                                                                                         <  2:575040/151‑1 (MQ=255)                                                           gAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTaa                                                                                      <  1:1012688/150‑1 (MQ=255)                                                           gAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTa                                                                                       <  1:754179/149‑1 (MQ=255)                                                            aaCAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAgg                                                                                    >  1:362907/1‑151 (MQ=255)                                                                   ttCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATa                                                                              >  2:361711/1‑150 (MQ=255)                                                                    tCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATaa                                                                             <  2:171281/150‑1 (MQ=255)                                                                    tCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATaa                                                                             <  2:348549/150‑1 (MQ=255)                                                                    tCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATa                                                                              <  1:209355/149‑1 (MQ=255)                                                                        ggCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAAt                                                                        <  2:176924/151‑1 (MQ=255)                                                                        ggCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAAt                                                                        <  1:1054790/151‑1 (MQ=255)                                                                           tGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGAc                                                                     >  1:1065223/1‑151 (MQ=255)                                                                            ggCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGa                                                                      <  2:916986/149‑1 (MQ=255)                                                                            ggCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACa                                                                    <  1:191691/151‑1 (MQ=255)                                                                             gCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACaa                                                                   <  2:362910/151‑1 (MQ=255)                                                                              cGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACaaa                                                                  <  2:301063/151‑1 (MQ=255)                                                                               gTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACaaaa                                                                 <  2:882472/151‑1 (MQ=255)                                                                               gTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACaaa                                                                  >  1:441094/1‑150 (MQ=255)                                                                                     tttCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATAAGTGTAAGGAGCATAAGGAATGACAAAAAttt                                                             >  1:1004164/1‑149 (MQ=255)                                                                                      ttCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGGAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAAttttt                                                           <  1:1087221/150‑1 (MQ=255)                                                                                      ttCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAAttttt                                                           >  1:1105205/1‑150 (MQ=255)                                                                                                gCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCt                                                     <  2:765618/146‑1 (MQ=255)                                                                                                gCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCt                                                     <  1:178000/146‑1 (MQ=255)                                                                                                gCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCt                                                     <  2:929994/146‑1 (MQ=255)                                                                                                gCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGaa                                                 <  1:975669/150‑1 (MQ=255)                                                                                                gCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGa                                                  <  2:901588/149‑1 (MQ=255)                                                                                                gCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGa                                                  <  2:940209/149‑1 (MQ=255)                                                                                                   aTTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAAtata                                             <  2:300922/151‑1 (MQ=255)                                                                                                       tACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATaaaa                                          <  1:288055/150‑1 (MQ=255)                                                                                                           cgAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAAc                                       >  1:990924/1‑149 (MQ=255)                                                                                                             aaGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAAc                                       >  2:989630/1‑147 (MQ=255)                                                                                                             aaGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAAc                                       >  2:719347/1‑147 (MQ=255)                                                                                                               gCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGc                                 >  2:309059/1‑151 (MQ=255)                                                                                                                    agagCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCtt                             <  1:668774/150‑1 (MQ=255)                                                                                                                    agagCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCtt                             <  2:783208/150‑1 (MQ=255)                                                                                                                    agagCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTa                            <  2:156618/151‑1 (MQ=255)                                                                                                                      agCAATATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTAtt                          <  1:971476/151‑1 (MQ=255)                                                                                                                         aaTATCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGGGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTg                       >  1:753542/1‑151 (MQ=255)                                                                                                                            atCTGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGt                     <  1:403010/150‑1 (MQ=255)                                                                                                                               tGGAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTAtt                  >  1:722416/1‑150 (MQ=255)                                                                                                                                ggAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTa                    <  1:607687/147‑1 (MQ=255)                                                                                                                                ggAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTAt                   <  1:917662/148‑1 (MQ=255)                                                                                                                                 gAACGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAAt               <  2:799456/151‑1 (MQ=255)                                                                                                                                  aaCGTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATa              <  2:786278/151‑1 (MQ=255)                                                                                                                                     gTCAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACaa           <  1:624719/151‑1 (MQ=255)                                                                                                                                       cAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAg          <  2:644634/150‑1 (MQ=255)                                                                                                                                       cAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAg          <  2:638360/150‑1 (MQ=255)                                                                                                                                       cAGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAg          <  1:78893/150‑1 (MQ=255)                                                                                                                                        aGCAATTCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAGGc        <  2:732519/151‑1 (MQ=255)                                                                                                                                              tCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAGGCTGttt   <  2:113677/150‑1 (MQ=255)                                                                                                                                              tCCCGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAGGCTGttt   <  2:1130249/150‑1 (MQ=255)                                                                                                                                               cccGGCGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAGGCTGtttt  <  2:250677/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                 TGGTAATGGCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGTGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGACAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAGGCTGTTTT  >  NC_000913/4079286‑4079577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑