Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,619,018 A→G T264A (ACG→GCG)  deoA → thymidine phosphorylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,619,0180AG98.8% 313.3 / ‑3.9 83T264A (ACG→GCG) deoAthymidine phosphorylase
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (44/38);  total (45/38)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

GAACTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGACGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGAAGT  >  NC_000913/4618871‑4619163
                                                                                                                                                   |                                                                                                                                                  
gAACTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCgg                                                                                                                                                 >  1:465832/1‑151 (MQ=255)
gAACTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCgg                                                                                                                                                 >  2:719357/1‑151 (MQ=255)
 aaCTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCggg                                                                                                                                                >  2:330549/1‑151 (MQ=255)
 aaCTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGACGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCggg                                                                                                                                                >  4:27095/1‑151 (MQ=255)
   ctctctGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCggggg                                                                                                                                              >  3:220487/1‑149 (MQ=255)
   ctctctGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCggggg                                                                                                                                              >  2:664562/1‑149 (MQ=255)
      tctGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGaa                                                                                                                                            >  3:756655/1‑150 (MQ=255)
         gAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAat                                                                                                                                           <  3:1184097/148‑1 (MQ=255)
                  gCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCCCCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCcg                                                                                                                                <  2:1335746/150‑1 (MQ=255)
                  gCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCcgc                                                                                                                               >  2:1241094/1‑151 (MQ=255)
                   ccGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCcgcg                                                                                                                              <  2:280090/151‑1 (MQ=255)
                    cGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGt                                                                                                                             <  2:1128483/151‑1 (MQ=255)
                    cGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGGGAATATCGTAAccc                                                                                                                                 >  3:314698/1‑147 (MQ=255)
                       aGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTg                                                                                                                          <  3:1068566/151‑1 (MQ=255)
                             tgttgGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGa                                                                                                                     <  4:433520/150‑1 (MQ=255)
                             tgttgGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGa                                                                                                                     <  2:575655/150‑1 (MQ=255)
                               ttgGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGt                                                                                                                  >  3:1327986/1‑151 (MQ=255)
                                  gCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑c                                                                                                              >  3:1109868/1‑151 (MQ=255)
                                   cGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑c                                                                                                              >  2:295752/1‑150 (MQ=255)
                                   cGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑Cg                                                                                                             >  2:436601/1‑151 (MQ=255)
                                   cGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGGAACCCGCGTCTGTTTGATGTCA‑c                                                                                                              >  4:169754/1‑150 (MQ=255)
                                         tAACGGCGCTGGCGTGCGCCCCACCGCGCTGCTCACCGACATGAATCAGGGACTGGCCCCCAGGGCAGGGAACGCGGGTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGGGGAAATCGTAAACCCCGGCTGTTTGTTGTCA‑CGGTGgcg                                                                                                       >  4:229855/1‑151 (MQ=255)
                                          aaCGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGgcg                                                                                                       <  3:690165/150‑1 (MQ=255)
                                          aaCGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGgcg                                                                                                       <  2:820001/150‑1 (MQ=255)
                                          aaCGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGgc                                                                                                        <  3:181172/149‑1 (MQ=255)
                                              gcgcTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTTATGTCA‑AGATGGCGCtgt                                                                                                   >  1:442389/1‑150 (MQ=255)
                                                gcTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGGGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCtgtg                                                                                                  >  1:326356/1‑149 (MQ=255)
                                                     cGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGgag                                                                                           <  2:749114/151‑1 (MQ=255)
                                                      gTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTgg                                                                                             >  2:443529/1‑148 (MQ=255)
                                                       tGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTgg                                                                                             >  1:706/1‑147 (MQ=255)
                                                       tGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTgg                                                                                             >  3:367867/1‑147 (MQ=255)
                                                            accaccGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTTAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGa                                                                                    <  3:1192219/151‑1 (MQ=255)
                                                            accaccGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAAACCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTg                                                                                     >  2:279002/1‑150 (MQ=255)
                                                            accaccGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGGGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTg                                                                                     >  3:293561/1‑150 (MQ=255)
                                                              caccGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGAtc                                                                                  <  3:1191292/151‑1 (MQ=255)
                                                                  gcgcTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCg                                                                              <  4:187540/151‑1 (MQ=255)
                                                                   cgcTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCgg                                                                             <  2:499031/151‑1 (MQ=255)
                                                                   cgcTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCgg                                                                             <  2:1291492/151‑1 (MQ=255)
                                                                      tgctCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGGAACCCGCGACCGTTTGATGTTACCGAGGGC‑CTGTGGGTGGAGGTGCTGGATTCCGGcc                                                                           >  3:839786/1‑149 (MQ=255)
                                                                       gctCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCaaa                                                                         <  2:314668/151‑1 (MQ=255)
                                                                       gctCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCaa                                                                          <  2:1184418/150‑1 (MQ=255)
                                                                       gctCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCa                                                                           <  4:14630/149‑1 (MQ=255)
                                                                        ctCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCaaa                                                                         >  3:302274/1‑150 (MQ=255)
                                                                          cACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTg                                                                      >  2:833102/1‑151 (MQ=255)
                                                                          cACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTg                                                                      <  3:1001809/151‑1 (MQ=255)
                                                                              gACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGGGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTgg                                                                     >  2:387125/1‑148 (MQ=255)
                                                                                   gAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGa                                                              <  3:817415/150‑1 (MQ=255)
                                                                                   gAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGAt                                                             <  2:658213/151‑1 (MQ=255)
                                                                                     aTCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGAt                                                             >  2:399146/1‑149 (MQ=255)
                                                                                     aTCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATg                                                            >  1:249162/1‑150 (MQ=255)
                                                                                      tCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGAc                                                          >  2:672866/1‑151 (MQ=255)
                                                                                       cAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGAc                                                          <  2:1280109/150‑1 (MQ=255)
                                                                                        aGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGc                                                        >  2:634279/1‑151 (MQ=255)
                                                                                        aGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGc                                                        >  2:61577/1‑151 (MQ=255)
                                                                                            aCTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGGTGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGcc                                                       >  3:256116/1‑148 (MQ=255)
                                                                                            aCTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGa                                                     <  2:981739/150‑1 (MQ=255)
                                                                                              tGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAgc                                                  >  1:167114/1‑151 (MQ=255)
                                                                                              tGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGAGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGAACCCCGGCAAACTGGCGAAAGATGACGCCgga                                                    >  2:706627/1‑147 (MQ=255)
                                                                                               ggCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAgcg                                                 >  3:1114041/1‑151 (MQ=255)
                                                                                               ggCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAgc                                                  <  4:19530/150‑1 (MQ=255)
                                                                                                gCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAgcgc                                                <  2:708547/151‑1 (MQ=255)
                                                                                                gCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGGAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCCGCAAACTGGCGAAAGATGACGcc                                                       >  3:250802/1‑144 (MQ=255)
                                                                                                        tGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGaa                                         >  2:973235/1‑150 (MQ=255)
                                                                                                          cAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCCAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAAtt                                      >  3:432016/1‑151 (MQ=255)
                                                                                                          cAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAAtt                                      <  4:46705/151‑1 (MQ=255)
                                                                                                            ggTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGc                                    <  3:832463/151‑1 (MQ=255)
                                                                                                               aaCGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGGCTGTTTGATGTCC‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAgg                                 >  4:464781/1‑151 (MQ=255)
                                                                                                                   cgGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGt                             <  2:173910/151‑1 (MQ=255)
                                                                                                                     gTTGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGc                           <  3:664582/151‑1 (MQ=255)
                                                                                                                      ttGAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGATGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCt                          >  1:293321/1‑151 (MQ=255)
                                                                                                                        gAAGTTCGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTgg                        <  4:413555/151‑1 (MQ=255)
                                                                                                                          aGTTCGTGAAGCGGTGCAGTTCCTGGCGGGGGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGGGCTgg                        >  3:48444/1‑149 (MQ=255)
                                                                                                                             tCGTGAAGCGGTGCAGTTCCTGACGGGAGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGaaa                     >  4:279546/1‑147 (MQ=255)
                                                                                                                              cGTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACg                  <  3:719655/151‑1 (MQ=255)
                                                                                                                               gTGAAGCGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTgggtaa                    >  2:657672/1‑144 (MQ=255)
                                                                                                                                     cGGTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGc           <  3:436635/151‑1 (MQ=255)
                                                                                                                                      ggTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGGGCTGGGGAACGGGaaa             >  3:953786/1‑148 (MQ=255)
                                                                                                                                       gTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGGCAACGGTAAAGctg         <  3:719384/151‑3 (MQ=255)
                                                                                                                                       gTGCAGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCgg         <  3:387161/151‑1 (MQ=255)
                                                                                                                                           aGTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGa     <  4:197246/151‑1 (MQ=255)
                                                                                                                                            gTTCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGaa    <  4:107886/151‑1 (MQ=255)
                                                                                                                                              tCCTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGAAg   <  2:679823/150‑1 (MQ=255)
                                                                                                                                                cTGGCGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCCGGACAAAGGGAAAGGGGccagagt  >  3:100397/1‑143 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GAACTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGACGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCA‑CGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGAAGT  >  NC_000913/4618871‑4619163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑