BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,165,959	A→G	intergenic (+274/‑126)	ycfP → / → ndh	putative UPF0227 family esterase/respiratory NADH dehydrogenase 2/cupric reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,165,959	0	A	G	100.0%	502.7 / NA	125	intergenic (+274/‑126)	ycfP/ndh	putative UPF0227 family esterase/respiratory NADH dehydrogenase 2/cupric reductase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/70); total (55/70)

Only 100 of 125 total aligned reads displayed.

GAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTACGCCATTGAAAAA  >  NC_000913/1165815‑1166104

gAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATg                                                                                                                                             >  3:884956/1‑151 (MQ=255)

 aaCGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGc                                                                                                                                            <  3:75486/151‑1 (MQ=255)

   cGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCAc                                                                                                                                          >  2:833606/1‑151 (MQ=255)

     cccTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAGGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCAcc                                                                                                                                         >  3:991929/1‑150 (MQ=255)

     cccTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCa                                                                                                                                        <  2:533713/151‑1 (MQ=255)

      ccTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCAt                                                                                                                                       >  2:692111/1‑151 (MQ=255)

      ccTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCAt                                                                                                                                       <  1:458124/151‑1 (MQ=255)

       cTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCAtt                                                                                                                                      >  3:103966/1‑151 (MQ=255)

         gCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTc                                                                                                                                     <  2:46735/150‑1 (MQ=255)

          cATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCa                                                                                                                                    <  2:1127338/150‑1 (MQ=255)

          cATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCa                                                                                                                                    >  3:1127393/1‑150 (MQ=255)

          cATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCAt                                                                                                                                   >  2:932261/1‑151 (MQ=255)

           aTACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATg                                                                                                                                  >  3:246433/1‑151 (MQ=255)

           aTACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATg                                                                                                                                  <  2:1399826/151‑1 (MQ=255)

              cacCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCCCCATTCATGTTa                                                                                                                               <  3:444371/151‑1 (MQ=255)

              cacCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGtt                                                                                                                                >  2:267965/1‑150 (MQ=255)

              cacCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTa                                                                                                                               <  3:1368919/151‑1 (MQ=255)

              cacCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTa                                                                                                                               <  2:823445/151‑1 (MQ=255)

                 cccTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATtc                                                                                                                            >  1:320233/1‑151 (MQ=255)

                  ccTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATtct                                                                                                                           <  3:244403/151‑1 (MQ=255)

                    tCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATtctc                                                                                                                          >  2:326343/1‑150 (MQ=255)

                     cACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATtctc                                                                                                                          <  3:1050856/149‑1 (MQ=255)

                     cACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCa                                                                                                                         >  3:1350349/1‑150 (MQ=255)

                          tataTCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCg                                                                                                                   >  4:264611/1‑151 (MQ=255)

                           atatCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGc                                                                                                                    <  4:357756/149‑1 (MQ=255)

                           atatCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCga                                                                                                                  <  3:699878/151‑1 (MQ=255)

                            tatCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCga                                                                                                                  >  3:878142/1‑150 (MQ=255)

                            tatCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCga                                                                                                                  >  1:9287/1‑150 (MQ=255)

                             atCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCgaa                                                                                                                 <  3:917439/150‑1 (MQ=255)

                             atCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCga                                                                                                                  >  1:452481/1‑149 (MQ=255)

                               cACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCgaagaa                                                                                                              <  3:1399533/151‑1 (MQ=255)

                               cACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCgaaga                                                                                                               >  2:541040/1‑150 (MQ=255)

                                aCTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAAc                                                                                                             >  2:37283/1‑151 (MQ=255)

                                 ctctCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAAc                                                                                                             >  2:1024073/1‑150 (MQ=255)

                                  tctcACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACAt                                                                                                           >  3:925089/1‑151 (MQ=255)

                                    tcACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACAttt                                                                                                         >  2:647394/1‑151 (MQ=255)

                                     cacaAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACAtttt                                                                                                        <  3:1306931/151‑1 (MQ=255)

                                     cacaAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACAtt                                                                                                          <  3:1334437/149‑1 (MQ=255)

                                       caAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTc                                                                                                       >  2:377895/1‑150 (MQ=255)

                                             cGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTg                                                                                                <  1:380018/151‑1 (MQ=255)

                                                    ataataAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCtg                                                                                         >  2:300179/1‑151 (MQ=255)

                                                      aataaacaataaacTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCtgtg                                                                                       <  3:157779/151‑2 (MQ=255)

                                                        taaacaataaacTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCtgttgt                                                                                     >  3:1314594/1‑151 (MQ=255)

                                                         aaacaataaacTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTgttgtt                                                                                    >  2:609779/1‑151 (MQ=255)

                                                             aataaacTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGttaatt                                                                                <  3:1167635/151‑1 (MQ=255)

                                                              ataaacTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGttaatta                                                                               <  2:89423/151‑1 (MQ=255)

                                                               taaacTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGttaatta                                                                               >  2:1840/1‑150 (MQ=255)

                                                                aaacTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGttaattaa                                                                              <  3:948943/150‑1 (MQ=255)

                                                                 aacTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAaga                                                                            <  4:441380/151‑1 (MQ=255)

                                                                   ctctGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAagag                                                                           >  2:109925/1‑150 (MQ=255)

                                                                       gTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATg                                                                      <  2:1246707/151‑1 (MQ=255)

                                                                        ttttttGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAATTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGt                                                                     >  2:1235431/1‑151 (MQ=255)

                                                                        ttttttGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATg                                                                      >  3:623130/1‑150 (MQ=255)

                                                                         tttttGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCTCCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTa                                                                        <  2:499350/147‑1 (MQ=255)

                                                                           tttGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTta                                                                   <  1:417326/150‑1 (MQ=255)

                                                                             tGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTtaat                                                                 >  3:1340917/1‑150 (MQ=255)

                                                                              gATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTtaata                                                                <  2:233891/150‑1 (MQ=255)

                                                                                tctcACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAAcc                                                             >  3:1198905/1‑151 (MQ=255)

                                                                                   cACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTtaataa                                                               <  1:24819/146‑1 (MQ=255)

                                                                                   cACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAAc                                                              <  3:1308439/147‑1 (MQ=255)

                                                                                   cACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCatt                                                          >  2:805378/1‑151 (MQ=255)

                                                                                   cACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCatt                                                          <  1:302323/151‑1 (MQ=255)

                                                                                   cACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCa                                                            <  1:21828/149‑1 (MQ=255)

                                                                                     cccGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCatta                                                         >  2:700591/1‑150 (MQ=255)

                                                                                       cGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCattaatt                                                      >  3:1289046/1‑151 (MQ=255)

                                                                                       cGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCattaatt                                                      <  1:240500/151‑1 (MQ=255)

                                                                                        ggTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCattaatta                                                     <  3:420562/151‑1 (MQ=255)

                                                                                           aaaGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACa                                                  <  1:415682/151‑1 (MQ=255)

                                                                                              gTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAAtt                                               <  2:1388060/151‑1 (MQ=255)

                                                                                                 gCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGt                                            <  2:901630/151‑1 (MQ=255)

                                                                                                  ccTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGtt                                           <  2:1063788/151‑1 (MQ=255)

                                                                                                  ccTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGtt                                           <  2:878107/151‑1 (MQ=255)

                                                                                                       cTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTta                                          <  1:155911/147‑1 (MQ=255)

                                                                                                         tttCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTtaata                                       <  3:873920/148‑1 (MQ=255)

                                                                                                         tttCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAAt                                    >  2:1287393/1‑151 (MQ=255)

                                                                                                         tttCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGCTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTtaata                                       <  1:430374/148‑1 (MQ=255)

                                                                                                          ttCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAAt                                    <  2:586490/150‑1 (MQ=255)

                                                                                                          ttCAGCAACAAAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAAt                                    <  3:1184592/150‑1 (MQ=255)

                                                                                                               caacaaAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAgg                              <  1:329991/151‑1 (MQ=255)

                                                                                                                aacaaAACTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAggg                             >  2:1111890/1‑151 (MQ=255)

                                                                                                                aacaaAACTTGATTAACATCAATGTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAggg                             >  3:1062833/1‑151 (MQ=255)

                                                                                                                   aaaaCTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGt                          <  3:967802/151‑1 (MQ=255)

                                                                                                                     aaCTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTc                         >  2:1393150/1‑150 (MQ=255)

                                                                                                                      aCTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCAc                       <  1:395757/151‑1 (MQ=255)

                                                                                                                      aCTTGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCAc                       <  4:243955/151‑1 (MQ=255)

                                                                                                                         tGATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGt                     <  2:1250148/150‑1 (MQ=255)

                                                                                                                          gATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGtt                    <  4:452477/150‑1 (MQ=255)

                                                                                                                          gATTAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTg                   <  3:724685/151‑1 (MQ=255)

                                                                                                                             tAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGAc                 <  3:833644/150‑1 (MQ=255)

                                                                                                                             tAACATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACt                >  3:38498/1‑151 (MQ=255)

                                                                                                                              aaCATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTa               <  3:168565/151‑1 (MQ=255)

                                                                                                                              aaCATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTa               <  3:1393221/151‑1 (MQ=255)

                                                                                                                              aaCATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGCTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTa               <  3:1024119/151‑1 (MQ=255)

                                                                                                                               aCATCAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTAc              <  3:541074/151‑1 (MQ=255)

                                                                                                                                   cAATTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTACGcc           <  2:1350277/150‑1 (MQ=255)

                                                                                                                                    aaTTTTGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTACGCCAt         >  4:438078/1‑151 (MQ=255)

                                                                                                                                      ttttGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTACGCCATTg       >  2:96394/1‑151 (MQ=255)

                                                                                                                                         tGGTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTACGCCATTGaa     >  3:702633/1‑150 (MQ=255)

                                                                                                                                           gTATGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTACGCCATTGaaaaa  <  3:267992/151‑1 (MQ=255)

                                                                                                                                             aTGGCCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAAAAAATTTAAGGGGGTCACGTTGACTACGCCATTGaaaa   >  4:449307/1‑148 (MQ=255)

GAACGCCCTGCATACACCCCTCACTCTATATCACTCTCACAAATTCGCTCAAATAATAAACAATAAACTCTGTTTTTTGATCTCACCCGGTAAAGTCGCCTATCTTTTCAGCAACAAAACTTGATTAACATCAATTTTGGTATGACCAATGCACCATTCATGTTATTCTCAATAGCGAAGAACATTTTCATTGCTGTAACCTGTTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGGTCACGTTGACTACGCCATTGAAAAA  >  NC_000913/1165815‑1166104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`