BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,188,526	G→A	G417G (GGC→GGT)	phoQ ←	sensory histidine kinase in two‑component regulatory system with PhoP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,188,526	0	G	A	100.0%	539.2 / NA	131	G417G (GGC→GGT)	phoQ	sensory histidine kinase in two‑component regulatory system with PhoP
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (58/73); total (58/73)

Only 100 of 131 total aligned reads displayed.

ATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGGCCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGACAAAGCTGATCT  >  NC_000913/1188380‑1188671

aTGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACcat                                                                                                                                               >  3:1394776/1‑151 (MQ=255)

aTGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACcat                                                                                                                                               <  2:35651/151‑1 (MQ=255)

 tGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACcatc                                                                                                                                              >  3:235510/1‑151 (MQ=255)

  gCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACcatca                                                                                                                                             <  2:966452/151‑1 (MQ=255)

  gCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACcatc                                                                                                                                              >  2:854760/1‑150 (MQ=255)

    tctctcCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCatcatc                                                                                                                                           >  2:1289979/1‑151 (MQ=255)

       ctcCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCatcatc                                                                                                                                           <  4:346104/148‑1 (MQ=255)

         ccGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCt                                                                                                                                         <  3:1113450/148‑1 (MQ=255)

           ggCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGAcc                                                                                                                                    >  1:218882/1‑151 (MQ=255)

           ggCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGAcc                                                                                                                                    <  2:1335157/151‑1 (MQ=255)

                cgaTTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAat                                                                                                                               <  3:744852/151‑1 (MQ=255)

                cgaTTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAat                                                                                                                               <  4:258180/151‑1 (MQ=255)

                    tttACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAAtata                                                                                                                            <  2:313161/150‑1 (MQ=255)

                     ttACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAatat                                                                                                                             >  4:176140/1‑148 (MQ=255)

                     ttACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAatat                                                                                                                             >  3:1201575/1‑148 (MQ=255)

                     ttACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATag                                                                                                                           <  4:476424/150‑1 (MQ=255)

                     ttACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATag                                                                                                                           <  2:944564/150‑1 (MQ=255)

                     ttACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATag                                                                                                                           <  2:460035/150‑1 (MQ=255)

                      tACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATag                                                                                                                           >  2:862862/1‑149 (MQ=255)

                       aCCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATagag                                                                                                                         <  3:237535/150‑1 (MQ=255)

                        cccTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATag                                                                                                                           >  3:835785/1‑147 (MQ=255)

                           tCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCt                                                                                                                    >  2:871274/1‑151 (MQ=255)

                            cATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCtc                                                                                                                   >  2:481674/1‑151 (MQ=255)

                            cATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCt                                                                                                                    <  2:231600/150‑1 (MQ=255)

                            cATATTGCTCGGTCATTTCGCGGGCTACCGCCAGCCCTACACCTTTCCCAGCGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAACGACCTCGCGCTTGCTTAATGGAATACCGCGACCATCCTCCTCGACCACAATATAGAGATGcg                                                                                                                    <  4:333812/150‑2 (MQ=255)

                             atatTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCtcg                                                                                                                  <  4:255144/151‑1 (MQ=255)

                                   cTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGtt                                                                                                            >  3:359936/1‑151 (MQ=255)

                                     cGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGttt                                                                                                           <  2:291421/150‑1 (MQ=255)

                                     cGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTg                                                                                                          >  3:790117/1‑151 (MQ=255)

                                      ggTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGc                                                                                                         >  3:336261/1‑151 (MQ=255)

                                         gATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCtt                                                                                                      <  3:204594/151‑1 (MQ=255)

                                          aTTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTg                                                                                                     <  4:162482/151‑1 (MQ=255)

                                               gcgGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGa                                                                                                 >  3:128518/1‑150 (MQ=255)

                                                 gggCTACCGCCAGTCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGTCCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATTTAGAGATGCTCGTCGGTTTGCCTTGCAGaa                                                                                                <  2:1354759/149‑1 (MQ=255)

                                                   gCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAAttt                                                                                            <  2:401399/151‑1 (MQ=255)

                                                    cTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTc                                                                                           >  3:964507/1‑151 (MQ=255)

                                                      aCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCg                                                                                          >  2:960859/1‑150 (MQ=255)

                                                      aCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCg                                                                                          <  2:1264472/150‑1 (MQ=255)

                                                       ccGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGAc                                                                                        <  2:792007/151‑1 (MQ=255)

                                                        cGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGttt                                                                                                           >  2:708834/1‑131 (MQ=255)

                                                        cGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGttt                                                                                                           <  3:708858/131‑1 (MQ=255)

                                                           cAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAAc                                                                                    >  1:323873/1‑151 (MQ=255)

                                                            aGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACt                                                                                   <  1:20027/151‑1 (MQ=255)

                                                             gCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGGAATTTCGACAAACTc                                                                                  >  1:394124/1‑151 (MQ=255)

                                                              cccTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCg                                                                                 <  4:294553/151‑1 (MQ=255)

                                                               ccTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCg                                                                                 >  3:469270/1‑150 (MQ=255)

                                                                  acacCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGc                                                                             <  4:150173/151‑1 (MQ=255)

                                                                     ccTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGTACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCaa                                                                           <  1:100492/150‑1 (MQ=255)

                                                                        tGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAata                                                                         <  3:1027164/149‑1 (MQ=255)

                                                                         gCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATAttt                                                                      <  2:790083/151‑1 (MQ=255)

                                                                         gCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATAttt                                                                      <  2:545944/151‑1 (MQ=255)

                                                                         gCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATAttt                                                                      >  2:517431/1‑151 (MQ=255)

                                                                         gCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATAttt                                                                      >  2:122693/1‑151 (MQ=255)

                                                                         gCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATAtt                                                                       <  4:47647/150‑1 (MQ=255)

                                                                            cAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTAc                                                                    >  2:306372/1‑150 (MQ=255)

                                                                             aGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTAc                                                                    >  2:604194/1‑149 (MQ=255)

                                                                             aGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTAc                                                                    >  2:482624/1‑149 (MQ=255)

                                                                             aGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAg                                                                  <  2:789638/151‑1 (MQ=255)

                                                                             aGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAg                                                                  <  3:1290306/151‑1 (MQ=255)

                                                                             aGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAg                                                                  <  4:468515/151‑1 (MQ=255)

                                                                              gggCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAgg                                                                 <  3:484383/151‑1 (MQ=255)

                                                                                gCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCa                                                               <  3:55864/151‑1 (MQ=255)

                                                                                   tAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCAtt                                                             >  3:1275066/1‑150 (MQ=255)

                                                                                    aaaGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTa                                                            <  3:662770/150‑1 (MQ=255)

                                                                                     aaGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATc                                                          >  2:211089/1‑151 (MQ=255)

                                                                                         aTCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAg                                                       <  3:1290047/150‑1 (MQ=255)

                                                                                         aTCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGc                                                      >  2:1191411/1‑151 (MQ=255)

                                                                                           cAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCAc                                                    >  2:685643/1‑151 (MQ=255)

                                                                                              cccGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGtt                                                 >  3:780092/1‑151 (MQ=255)

                                                                                               ccGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTg                                                <  2:1260448/151‑1 (MQ=255)

                                                                                               ccGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTg                                                >  2:479525/1‑151 (MQ=255)

                                                                                                cGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGc                                               <  2:935578/151‑1 (MQ=255)

                                                                                                     aCCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATc                                          <  2:1231082/151‑1 (MQ=255)

                                                                                                      ccACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATc                                          >  3:842102/1‑150 (MQ=255)

                                                                                                          ggTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTc                                     >  2:963225/1‑151 (MQ=255)

                                                                                                          ggTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTc                                     >  1:362117/1‑151 (MQ=255)

                                                                                                             cGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGa                                   >  2:100056/1‑150 (MQ=255)

                                                                                                             cGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGAc                                  <  1:205688/151‑1 (MQ=255)

                                                                                                               aaaaTGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACaa                                <  3:306402/151‑1 (MQ=255)

                                                                                                                aaaTGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACaa                                >  2:1095680/1‑150 (MQ=255)

                                                                                                                aaaTGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACaa                                >  2:23209/1‑150 (MQ=255)

                                                                                                                   tGACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATc                            >  3:905832/1‑151 (MQ=255)

                                                                                                                    gACCTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATc                            <  2:309839/150‑1 (MQ=255)

                                                                                                                      ccTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGtt                         <  1:358522/151‑1 (MQ=255)

                                                                                                                      ccTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGtt                         <  1:289036/151‑1 (MQ=255)

                                                                                                                      ccTCTCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGtt                         <  3:862900/151‑1 (MQ=255)

                                                                                                                       ctctCGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTc                        >  1:284387/1‑151 (MQ=255)

                                                                                                                         ctcGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTg                      >  1:137803/1‑151 (MQ=255)

                                                                                                                          tcGCTTGCTTAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGc                     >  1:481582/1‑151 (MQ=255)

                                                                                                                               tgcttAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCAcc                >  3:962358/1‑151 (MQ=255)

                                                                                                                                  ttAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGa              >  2:520514/1‑150 (MQ=255)

                                                                                                                                  ttAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGa              <  3:520550/150‑1 (MQ=255)

                                                                                                                                   tAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGAc             >  3:1119324/1‑150 (MQ=255)

                                                                                                                                   tAATGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGAc             <  3:287606/150‑1 (MQ=255)

                                                                                                                                     aTGGAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGACaaa          <  3:211117/151‑1 (MQ=255)

                                                                                                                                       ggAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGACAAAGc        <  4:418660/151‑1 (MQ=255)

                                                                                                                                        gAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGACAAAGCt       <  3:251655/151‑1 (MQ=255)

                                                                                                                                        gAATACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGACAAAGCt       <  3:481708/151‑1 (MQ=255)

                                                                                                                                         aaTACCGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGACAAAGCTg      <  2:1394705/151‑1 (MQ=255)

                                                                                                                                             ccGGGACCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGACAAAGCTGAtct  <  2:680621/151‑1 (MQ=255)

ATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGGCCATCATCCTCGACCACAATATAGAGATGCTCGTCGGTTTGCCTTGCAGAAATTTCGACAAACTCGAGGCAATATTTACAGGCATTATCCAGCACGTTGCCCATCACCTCGACAAAATCGTTCTGCTCACCGACAAAGCTGATCT  >  NC_000913/1188380‑1188671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`