| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,639,617 | T→C | G147G (GGA→GGG) | rrrQ ← | Qin prophage; putative lysozyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,639,617 | 0 | T | C | 99.2% | 434.5 / ‑4.5 | 119 | G147G (GGA→GGG) | rrrQ | Qin prophage; putative lysozyme |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (67/51); total (67/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
ACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGTCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTCG > NC_000913/1639469‑1639764 | aCATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGccc < 2:1178188/151‑1 (MQ=255) cATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCg > 1:199561/1‑151 (MQ=255) tCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCa < 2:1040860/150‑1 (MQ=255) ccGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATACACTGTTCTATCCCCCAGAAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCaac > 3:195523/1‑149 (MQ=255) cgacgaTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATcc > 3:1110002/1‑151 (MQ=255) cgaTAAATCCTGACAACACGAGAAAAATCGCCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCtt < 3:1070209/150‑1 (MQ=255) gaTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTa > 3:759256/1‑150 (MQ=255) gaTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTa > 1:346757/1‑150 (MQ=255) aaaTCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATcc < 2:768501/151‑1 (MQ=255) ccTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATccacc > 2:589766/1‑150 (MQ=255) tGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGc > 3:626807/1‑151 (MQ=255) aacaCGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAAt < 1:189693/151‑1 (MQ=255) aacaCGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAAt < 3:314903/151‑1 (MQ=255) cacGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCg < 2:438845/151‑1 (MQ=255) gaAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCg > 2:1182327/1‑151 (MQ=255) aaaaTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGc > 3:1368363/1‑150 (MQ=255) aaaaTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGc > 3:807288/1‑150 (MQ=255) aaaaTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCa < 2:626781/151‑1 (MQ=255) aTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGc > 3:1120816/1‑151 (MQ=255) tCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGc > 3:1397210/1‑150 (MQ=255) cACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCAc < 3:1246723/151‑1 (MQ=255) ccATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCt > 4:16277/1‑151 (MQ=255) cATGAATATCTTATGCACTGGTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCtt < 3:1060410/151‑1 (MQ=255) cATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCtt < 3:861192/151‑1 (MQ=255) gAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTa < 3:1210126/150‑1 (MQ=255) gAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTAc > 2:1088403/1‑151 (MQ=255) gAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTAc > 2:652783/1‑151 (MQ=255) aaTATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACg > 3:688690/1‑151 (MQ=255) aaTATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACg > 2:962307/1‑151 (MQ=255) tatCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGAt > 3:822331/1‑151 (MQ=255) atCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTTACATTTATTTGAACGAACGCGGCAACCGCGTCCGCCATCCTTAATCCACCACCTAACCCCTTCGCATGCCCCTTCACGac < 3:659033/150‑2 (MQ=255) atCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATc > 4:468845/1‑151 (MQ=255) cTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCAc > 2:565440/1‑151 (MQ=255) tCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGCCGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGc < 3:775348/150‑1 (MQ=255) tCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGc > 2:221837/1‑150 (MQ=255) cACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCa < 4:427185/150‑1 (MQ=255) cACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCAt < 2:157448/151‑1 (MQ=255) tGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTc > 3:1014926/1‑150 (MQ=255) tCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGc < 3:957996/150‑1 (MQ=255) cccccAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTta < 3:1208980/151‑1 (MQ=255) agcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATaaa > 1:363227/1‑150 (MQ=255) gcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAAc > 1:266231/1‑151 (MQ=255) cagGTTCGTGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACg < 2:266444/151‑1 (MQ=255) agGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGt < 2:163853/151‑1 (MQ=255) ttAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCg > 3:386501/1‑150 (MQ=255) gcgcTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACggg > 2:597500/1‑150 (MQ=255) cgcTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGa > 1:344660/1‑150 (MQ=255) ctctCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCa > 1:236095/1‑124 (MQ=255) ctctCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCa < 4:236092/124‑1 (MQ=255) ctctCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGaaa > 4:435247/1‑150 (MQ=255) tctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAAc > 2:1064696/1‑137 (MQ=255) tctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAAc < 3:1064742/137‑1 (MQ=255) cTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACtt > 3:132782/1‑150 (MQ=255) tGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTAc > 3:680710/1‑151 (MQ=255) ggTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTAcc < 4:26039/151‑1 (MQ=255) cACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCggg > 3:640212/1‑151 (MQ=255) cACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCggg < 3:387437/151‑1 (MQ=255) gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGcc < 2:807253/151‑1 (MQ=255) acgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa < 2:822296/151‑1 (MQ=255) acgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa < 1:350724/151‑1 (MQ=255) cgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa > 2:256296/1‑150 (MQ=255) tAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGtt > 1:170333/1‑151 (MQ=255) aaCCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGtt > 1:64443/1‑150 (MQ=255) gACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAggg > 3:935206/1‑151 (MQ=255) gACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAggg > 4:13925/1‑151 (MQ=255) ccGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGa < 4:160787/150‑1 (MQ=255) ccGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGAc > 2:349881/1‑151 (MQ=255) gTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACaa < 3:245252/151‑1 (MQ=255) cAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATg > 1:246421/1‑151 (MQ=255) cAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATg > 4:287381/1‑151 (MQ=255) aGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAAt < 2:367393/149‑1 (MQ=255) aGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGa < 3:1315725/151‑1 (MQ=255) ttATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcg > 3:171628/1‑151 (MQ=255) ttATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcg > 2:534888/1‑151 (MQ=255) tATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcg < 3:1026887/150‑1 (MQ=255) aTTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcgcg > 3:23147/1‑151 (MQ=255) aTTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcgcg < 2:1397139/151‑1 (MQ=255) tttGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcgcg > 3:1398316/1‑150 (MQ=255) ttGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGAt > 2:388704/1‑151 (MQ=255) tGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGAt < 2:935170/150‑1 (MQ=255) gAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATa < 2:225148/150‑1 (MQ=255) aaCGAATGCGGCAATCGCGCCCGCCAACCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATAcc < 2:195494/151‑1 (MQ=255) aCGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATAccc > 3:180764/1‑151 (MQ=255) aCGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATAccc > 2:118436/1‑151 (MQ=255) cGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCg > 2:785510/1‑151 (MQ=255) gAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGc > 2:632077/1‑151 (MQ=255) aaTGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCACATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCt > 2:297217/1‑151 (MQ=255) gCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCtttt < 1:82487/151‑1 (MQ=255) cGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCttttt < 2:576798/151‑1 (MQ=255) cGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCttttt > 4:35610/1‑151 (MQ=255) gCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCttttt < 2:1368294/149‑1 (MQ=255) cAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTtgtg < 2:816390/151‑1 (MQ=255) cAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTtgtg < 3:340311/151‑1 (MQ=255) aaTCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTgg > 3:1265873/1‑151 (MQ=255) aaTCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTgg > 2:1182593/1‑151 (MQ=255) aTCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGt > 2:898846/1‑151 (MQ=255) cgcgCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGtt < 4:368084/150‑1 (MQ=255) cgcgCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTc < 2:688665/151‑1 (MQ=255) cgcgCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTc < 4:416557/151‑1 (MQ=255) gcgcCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTCg > 2:1203920/1‑151 (MQ=255) | ACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGTCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTCG > NC_000913/1639469‑1639764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |