Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 277,333 A→G T207A (ACG→GCG)  mmuM → CP4‑6 prophage; S‑methylmethionine:homocysteine methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913277,3330AG100.0% 475.3 / NA 124T207A (ACG→GCG) mmuMCP4‑6 prophage; S‑methylmethionine:homocysteine methyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (68/56);  total (68/56)

Only 100 of 124 total aligned reads displayed.

GCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTACGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATCCGAAC  >  NC_000913/277185‑277479
                                                                                                                                                    |                                                                                                                                                  
gCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGcg                                                                                                                                                  >  1:44536/1‑151 (MQ=255)
  tGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGcgcc                                                                                                                                                >  2:832312/1‑151 (MQ=255)
   ggATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGcgccg                                                                                                                                               <  4:162930/151‑1 (MQ=255)
   ggATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGcgcc                                                                                                                                                <  4:57315/150‑1 (MQ=255)
    gATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTGCCCTGCGCGACAGCGAACACCTGAGCGACGGTGcgcc                                                                                                                                                <  2:1167427/149‑1 (MQ=255)
         cGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGt                                                                                                                                         >  3:25454/1‑151 (MQ=255)
          ggggCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGt                                                                                                                                         >  3:120629/1‑150 (MQ=255)
           gggCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGa                                                                                                                                       <  1:167601/151‑1 (MQ=255)
            ggCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGAc                                                                                                                                      >  4:18798/1‑151 (MQ=255)
                     gctgGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGt                                                                                                                                    <  4:183292/144‑1 (MQ=255)
                     gctgGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTg                                                                                                                                   <  1:137375/145‑1 (MQ=255)
                     gctgGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGgttgcg                                                                                                                             <  4:272508/151‑1 (MQ=255)
                     gctgGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGgtt                                                                                                                                <  3:352076/148‑1 (MQ=255)
                        ggCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGgttgcgttg                                                                                                                          <  1:254209/151‑1 (MQ=255)
                        ggCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACAACTGAGCGACGGCGCGCCGCTGCGTGACGTGgttgcgtt                                                                                                                           <  3:1093566/150‑1 (MQ=255)
                          ccTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCt                                                                                                                        >  3:88837/1‑151 (MQ=255)
                          ccTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCt                                                                                                                        <  1:25877/151‑1 (MQ=255)
                            tGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTgg                                                                                                                      >  2:686604/1‑151 (MQ=255)
                              cGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCg                                                                                                                    >  2:455448/1‑151 (MQ=255)
                               gAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCgg                                                                                                                   >  4:435753/1‑151 (MQ=255)
                               gAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCgg                                                                                                                   >  3:1093355/1‑151 (MQ=255)
                               gAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCgg                                                                                                                   <  2:1039191/151‑1 (MQ=255)
                                aaaCCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCggg                                                                                                                  >  3:424123/1‑151 (MQ=255)
                                aaaCCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCggg                                                                                                                  >  3:282044/1‑151 (MQ=255)
                                 aaCCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCggg                                                                                                                  >  2:221831/1‑150 (MQ=255)
                                      tGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATcc                                                                                                            >  3:111577/1‑151 (MQ=255)
                                       gCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATcc                                                                                                            >  2:73916/1‑150 (MQ=255)
                                        ccGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGc                                                                                                          <  1:92299/151‑1 (MQ=255)
                                         cGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGc                                                                                                          >  2:604994/1‑150 (MQ=255)
                                          gAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAg                                                                                                        <  3:397368/151‑1 (MQ=255)
                                          gAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGGTATCCGc                                                                                                          >  3:437298/1‑149 (MQ=255)
                                           aaTTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAgg                                                                                                       >  2:1046869/1‑151 (MQ=255)
                                              ttttCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAggtg                                                                                                     <  3:187735/150‑1 (MQ=255)
                                                ttCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACCCCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAggtggt                                                                                                   <  2:509317/150‑1 (MQ=255)
                                                 tCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGgtggtg                                                                                                  <  4:365134/150‑1 (MQ=255)
                                                  ccGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGtggtgg                                                                                                 >  3:535579/1‑150 (MQ=255)
                                                   cGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAggggg                                                                                                    >  3:367164/1‑146 (MQ=255)
                                                     agaTTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGgcgc                                                                                              >  3:392979/1‑150 (MQ=255)
                                                      gaTTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTa                                                                                            <  3:450546/151‑1 (MQ=255)
                                                      gaTTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGGGGTGGCGCt                                                                                             >  1:320985/1‑150 (MQ=255)
                                                        ttGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGGGGCGCTa                                                                                            >  3:1361880/1‑149 (MQ=255)
                                                           aGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCAt                                                                                       <  3:721179/151‑1 (MQ=255)
                                                              cGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGGTATCCGCAGGTGGTGGCGCTAGGCATTa                                                                                     >  2:1008307/1‑150 (MQ=255)
                                                                 tGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGGGGGGGCGCTAGGCATTAACt                                                                                  >  2:361691/1‑150 (MQ=255)
                                                                   gCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTa                                                                               <  2:481042/151‑1 (MQ=255)
                                                                   gCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGGGGTGGCGCTAGGCATTAACTGt                                                                                >  1:206784/1‑150 (MQ=255)
                                                                    ccGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGCGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTAt                                                                              <  2:34379/151‑1 (MQ=255)
                                                                      gAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCCGGTGGTGGCGCTATGAATTAACTGGAtt                                                                             >  2:504645/1‑150 (MQ=255)
                                                                      gAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGATCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGCTATCCGCAGGTGGTGGCGCTAGGCATTAACTg                                                                                 >  2:1201213/1‑146 (MQ=255)
                                                                        gCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTgcg                                                                          <  2:1259165/151‑1 (MQ=255)
                                                                          tGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTgcgc                                                                         >  3:640900/1‑150 (MQ=255)
                                                                           gTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCt                                                                        <  1:219401/150‑1 (MQ=255)
                                                                           gTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGGGGTGGCGCTAGGCATTAACTGTATTGCGCTg                                                                       >  2:1251326/1‑151 (MQ=255)
                                                                                  gCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAaca                                                                <  2:1072252/151‑1 (MQ=255)
                                                                                    atatCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAAcacc                                                              >  4:101827/1‑151 (MQ=255)
                                                                                      atCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGGGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAAcaccac                                                            >  3:965434/1‑151 (MQ=255)
                                                                                       tCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACaccacc                                                           >  2:1187531/1‑151 (MQ=255)
                                                                                       tCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGGGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAAAaccacc                                                           >  1:258910/1‑151 (MQ=255)
                                                                                         cgcgTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGc                                                         >  4:30878/1‑151 (MQ=255)
                                                                                          gcgTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCt                                                        <  3:1042760/151‑1 (MQ=255)
                                                                                              gcgcGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGt                                                    <  4:270663/151‑1 (MQ=255)
                                                                                                gcgGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGtt                                                   >  2:1272126/1‑150 (MQ=255)
                                                                                                  gggCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTgc                                                 >  2:823119/1‑150 (MQ=255)
                                                                                                    gCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGGGGGGCTAGGCATTAAATGTATTGCGCTGGAAAACACCCCCGGTGCGTTgca                                                >  3:985242/1‑149 (MQ=255)
                                                                                                      gTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCAt                                            >  3:662036/1‑151 (MQ=255)
                                                                                                       tGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCAtt                                           >  2:249415/1‑151 (MQ=255)
                                                                                                        ggTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCAttt                                          <  3:750545/151‑1 (MQ=255)
                                                                                                        ggTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCAttt                                          <  1:129673/151‑1 (MQ=255)
                                                                                                        ggTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCAttt                                          <  2:55056/151‑1 (MQ=255)
                                                                                                           tctcATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTac                                        <  2:282017/150‑1 (MQ=255)
                                                                                                           tctcATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGGATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTac                                        >  1:89433/1‑150 (MQ=255)
                                                                                                              cATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACg                                     <  2:167061/150‑1 (MQ=255)
                                                                                                               aTTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACgg                                    >  2:186089/1‑150 (MQ=255)
                                                                                                                  tACCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGttt                                 >  2:377711/1‑150 (MQ=255)
                                                                                                                   aCCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGttt                                 <  2:809207/149‑1 (MQ=255)
                                                                                                                   aCCCTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTa                                <  3:815056/150‑1 (MQ=255)
                                                                                                                    cccTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTaa                               <  3:686628/150‑1 (MQ=255)
                                                                                                                     ccTGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACg                             <  3:221856/151‑1 (MQ=255)
                                                                                                                       tGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACgg                            >  2:954521/1‑150 (MQ=255)
                                                                                                                       tGCGCGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACgg                            >  3:589668/1‑150 (MQ=255)
                                                                                                                        gcgcGACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGt                           <  3:507562/150‑1 (MQ=255)
                                                                                                                          gcgACAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGtgct                        <  2:783139/151‑1 (MQ=255)
                                                                                                                              cAGCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGcc                     >  3:301737/1‑150 (MQ=255)
                                                                                                                                gCGAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCt                  <  4:269047/151‑1 (MQ=255)
                                                                                                                                  gAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCtgg                <  4:184441/151‑1 (MQ=255)
                                                                                                                                  gAACACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCtgg                >  3:968884/1‑151 (MQ=255)
                                                                                                                                   aaCACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCtggt               <  3:926229/151‑1 (MQ=255)
                                                                                                                                   aaCACCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCtggt               <  3:361722/151‑1 (MQ=255)
                                                                                                                                     cacCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCtggtgg             <  2:88825/151‑1 (MQ=255)
                                                                                                                                     cacCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCtggtgg             <  3:515530/151‑1 (MQ=255)
                                                                                                                                      acCTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAAATGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGGTTAACGGTGCTGCCGCtggtgg             >  3:1348407/1‑150 (MQ=255)
                                                                                                                                       ccTGAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGgtggtg           >  2:1199618/1‑151 (MQ=255)
                                                                                                                                          gAGCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTa         <  2:648334/150‑1 (MQ=255)
                                                                                                                                            gCGACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATcc      <  4:324622/151‑1 (MQ=255)
                                                                                                                                              gACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATCCGa    <  2:1361811/151‑1 (MQ=255)
                                                                                                                                              gACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATCCGa    <  2:111561/151‑1 (MQ=255)
                                                                                                                                              gACGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGGGGGGGCGCCAGGCATTAACTGTATTGCGCTGGGAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATcc      >  3:107714/1‑149 (MQ=255)
                                                                                                                                               aCGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATCCGaa   <  2:800211/151‑1 (MQ=255)
                                                                                                                                               aCGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCCAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGGTTAACGGTGCTGCCGCTGGGGGTGTATcc      >  3:913733/1‑148 (MQ=255)
                                                                                                                                                cGGTGCGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATCCGAAc  >  2:356099/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTACGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATCCGAAC  >  NC_000913/277185‑277479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑