Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,812,356 T→C G310G (GGT→GGC emrA → multidrug efflux system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,812,3560TC100.0% 482.6 / NA 125G310G (GGT→GGCemrAmultidrug efflux system
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (63/62);  total (63/62)

Only 100 of 125 total aligned reads displayed.

CGCAGATTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGTAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATAAAGTA  >  NC_000913/2812208‑2812503
                                                                                                                                                    |                                                                                                                                                   
cGCAGATTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCaa                                                                                                                                                   <  3:160860/151‑1 (MQ=255)
  cAGATTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACt                                                                                                                                                 <  2:329145/151‑1 (MQ=255)
   aGATTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTg                                                                                                                                                >  2:635467/1‑151 (MQ=255)
     aTTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTgg                                                                                                                                               >  2:977642/1‑150 (MQ=255)
     aTTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGa                                                                                                                                              <  2:46814/151‑1 (MQ=255)
          cAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCaaa                                                                                                                                         <  1:107906/151‑1 (MQ=255)
          cAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCaaa                                                                                                                                         <  2:234889/151‑1 (MQ=255)
          cAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCaaa                                                                                                                                         <  2:1370660/151‑1 (MQ=255)
          cAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCaa                                                                                                                                          >  2:39977/1‑150 (MQ=255)
          cAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCaa                                                                                                                                          >  2:1253564/1‑150 (MQ=255)
          cAATATGCGTATCGGTCAGCCGGTCACTATCACCAAGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGAGGTTGGTATGGATATGGGCACAGGCAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACAGGCAACTGGATCaa                                                                                                                                          >  3:763863/1‑150 (MQ=255)
            atatGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGt                                                                                                                                       >  2:207316/1‑151 (MQ=255)
            atatGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGt                                                                                                                                       >  3:1252625/1‑151 (MQ=255)
              atGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTc                                                                                                                                      <  2:28159/150‑1 (MQ=255)
              atGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTc                                                                                                                                      <  2:1283240/150‑1 (MQ=255)
               tGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGt                                                                                                                                    >  3:460289/1‑151 (MQ=255)
                gCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGtt                                                                                                                                   >  3:1254199/1‑151 (MQ=255)
                 cGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTc                                                                                                                                  <  3:655341/151‑1 (MQ=255)
                 cGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTc                                                                                                                                  >  2:1237093/1‑151 (MQ=255)
                      cGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGt                                                                                                                             >  2:104019/1‑151 (MQ=255)
                         tCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTg                                                                                                                          >  4:102711/1‑151 (MQ=255)
                          cAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGc                                                                                                                         <  1:439611/151‑1 (MQ=255)
                          cAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGc                                                                                                                         <  4:58825/151‑1 (MQ=255)
                          cAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGc                                                                                                                         <  1:114090/151‑1 (MQ=255)
                             ccGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCtg                                                                                                                      >  2:959392/1‑151 (MQ=255)
                                   aCTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTa                                                                                                                <  2:890590/151‑1 (MQ=255)
                                       tCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCg                                                                                                             >  3:962206/1‑150 (MQ=255)
                                        caccacGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGa                                                                                                            <  2:879713/150‑1 (MQ=255)
                                           cacGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTg                                                                                                        <  2:1003518/151‑1 (MQ=255)
                                           cacGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTg                                                                                                        >  4:296397/1‑151 (MQ=255)
                                            acGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTgg                                                                                                       >  1:190794/1‑151 (MQ=255)
                                             cGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTgg                                                                                                       >  3:441881/1‑150 (MQ=255)
                                               gATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGAcc                                                                                                    >  2:1367246/1‑151 (MQ=255)
                                                atatTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGAcc                                                                                                    >  3:596223/1‑150 (MQ=255)
                                                   tttACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCg                                                                                                             <  2:784435/138‑1 (MQ=255)
                                                   tttACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCg                                                                                                             >  3:784470/1‑138 (MQ=255)
                                                      aCGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACa                                                                                             <  1:364248/151‑1 (MQ=255)
                                                        ggCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGc                                                                                           >  2:1072998/1‑151 (MQ=255)
                                                          cGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTg                                                                                         >  3:261076/1‑151 (MQ=255)
                                                              gatgTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAg                                                                                      <  4:111087/150‑1 (MQ=255)
                                                               atgTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGc                                                                                     >  1:312214/1‑150 (MQ=255)
                                                                tgtgAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCa                                                                                    >  2:948709/1‑150 (MQ=255)
                                                                 gtgAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCaa                                                                                   <  3:933651/150‑1 (MQ=255)
                                                                 gtgAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAat                                                                                  >  2:14545/1‑151 (MQ=255)
                                                                 gtgAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAat                                                                                  <  2:1078931/151‑1 (MQ=255)
                                                                 gtgAAATACACCGGTAAAGTGGTTGGGCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAat                                                                                  <  2:1310233/151‑1 (MQ=255)
                                                                  tgAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAat                                                                                  >  3:6683/1‑150 (MQ=255)
                                                                   gAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAata                                                                                 <  2:453258/150‑1 (MQ=255)
                                                                   gAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATAAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAatat                                                                                >  2:1245065/1‑151 (MQ=255)
                                                                    aaaTACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATc                                                                               >  3:892238/1‑151 (MQ=255)
                                                                    aaaTACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATc                                                                               <  3:1136171/151‑1 (MQ=255)
                                                                           ccGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGc                                                                         <  1:243323/150‑1 (MQ=255)
                                                                           ccGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCg                                                                        >  4:456679/1‑151 (MQ=255)
                                                                            cGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGt                                                                       <  4:369651/151‑1 (MQ=255)
                                                                            cGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGt                                                                       >  4:453979/1‑151 (MQ=255)
                                                                             ggTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGt                                                                       >  2:1139158/1‑150 (MQ=255)
                                                                              gTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTAt                                                                     <  3:25856/151‑1 (MQ=255)
                                                                                aaaGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCg                                                                   >  2:983333/1‑151 (MQ=255)
                                                                                aaaGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCg                                                                   >  3:579210/1‑151 (MQ=255)
                                                                                 aaGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCgg                                                                  >  2:1298155/1‑151 (MQ=255)
                                                                                  aGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGt                                                                 >  3:780745/1‑151 (MQ=255)
                                                                                    tggttggtCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGt                                                                 <  2:763828/149‑1 (MQ=255)
                                                                                        tggtCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTcc                                                           >  1:228027/1‑151 (MQ=255)
                                                                                            cTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGc                                                       >  3:716280/1‑151 (MQ=255)
                                                                                            cTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGc                                                       >  2:580831/1‑151 (MQ=255)
                                                                                                  atGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTg                                                  >  2:83896/1‑150 (MQ=255)
                                                                                                  atGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTg                                                  <  4:157163/150‑1 (MQ=255)
                                                                                                  atGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGa                                                 <  2:733675/151‑1 (MQ=255)
                                                                                                    gggCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGc                                               <  2:1087778/151‑1 (MQ=255)
                                                                                                     ggCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCg                                              <  1:249145/151‑1 (MQ=255)
                                                                                                         caGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCa                                           >  3:930265/1‑150 (MQ=255)
                                                                                                          aGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAAt                                         >  2:332970/1‑151 (MQ=255)
                                                                                                            gTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATAc                                       >  1:218312/1‑151 (MQ=255)
                                                                                                                cgcgTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACt                                   <  3:39984/151‑1 (MQ=255)
                                                                                                                  cgTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTaa                                 <  3:940368/151‑1 (MQ=255)
                                                                                                                  cgTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTa                                  >  2:149704/1‑150 (MQ=255)
                                                                                                                   gTTCTCACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAAc                                >  3:540372/1‑151 (MQ=255)
                                                                                                                     tctcACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAAcc                               <  4:146137/150‑1 (MQ=255)
                                                                                                                      ctctctGCTTCCAGCGCAAAATGCGACCGGCAACTCGATCAAAGTCGTGCAGCGTCTGCCTGTGCGTAAAGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGGGTATCGGTTCGTCCGAGCTGGTGAGCGTCAATACCACTAAcc                               <  3:115329/149‑1 (MQ=255)
                                                                                                                       tcACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTg                            >  1:382389/1‑151 (MQ=255)
                                                                                                                        cACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTg                            <  4:25458/150‑1 (MQ=255)
                                                                                                                        cACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTg                            <  1:11155/150‑1 (MQ=255)
                                                                                                                        cACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTg                            >  2:993623/1‑150 (MQ=255)
                                                                                                                        cACTGCTTCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGa                           <  2:121710/151‑1 (MQ=255)
                                                                                                                               tCCAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTc                      >  3:1025581/1‑149 (MQ=255)
                                                                                                                                ccAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAgg                   <  2:716254/151‑1 (MQ=255)
                                                                                                                                 cAGCGCAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGt                  <  3:104034/151‑1 (MQ=255)
                                                                                                                                      cAAAATGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTgg             >  4:271832/1‑151 (MQ=255)
                                                                                                                                       aaaaTGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGc            >  1:406043/1‑151 (MQ=255)
                                                                                                                                       aaaaTGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGc            >  2:244840/1‑151 (MQ=255)
                                                                                                                                        aaaTGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCa           <  2:441847/151‑1 (MQ=255)
                                                                                                                                          aTGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATTCCACTAACCGTGACGGTCAGGTACTGGCaa          <  3:1056938/150‑1 (MQ=255)
                                                                                                                                          aTGCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCaa          >  2:1056892/1‑150 (MQ=255)
                                                                                                                                            gCGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAAt        <  2:460254/150‑1 (MQ=255)
                                                                                                                                             cGACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATaa      <  3:1237152/151‑1 (MQ=255)
                                                                                                                                              gACCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATaa      >  2:1035080/1‑150 (MQ=255)
                                                                                                                                              gACCGGCAACTGGATCAAAGTCGTTAAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCACTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATaa      >  4:65764/1‑150 (MQ=255)
                                                                                                                                               aCCGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATaa      >  3:609562/1‑149 (MQ=255)
                                                                                                                                                ccGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGCATCGGTTTGTCCACGCTGGTGAGCGTCCATACCACTAACCGTGACGGTCAGGTACTGGCAAATAAAGt   >  3:797607/1‑151 (MQ=255)
                                                                                                                                                 cGGCAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATAAAGTa  <  3:580862/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CGCAGATTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGTAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATAAAGTA  >  NC_000913/2812208‑2812503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: