Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,232,230	T→C	C129C (TGT→TGC)	cdd →	cytidine/deoxycytidine deaminase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,232,230	0	T	C	100.0%	204.3 / NA	55	C129C (TGT→TGC)	cdd	cytidine/deoxycytidine deaminase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (30/25);  total (30/25)

CGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATG  >  NC_000913/2232086‑2232374                                                                                                                                                 |                                                                                                                                                 cGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAGCTACACGCCTTGCGGTCAc                                                                                                                                            >  1:226828/1‑151 (MQ=255) cGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCAc                                                                                                                                            >  1:76317/1‑151 (MQ=255)   gAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTg                                                                                                                                          >  2:44823/1‑151 (MQ=255)       cTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGt                                                                                                                                      >  1:460997/1‑151 (MQ=255)          gTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTc                                                                                                                                     >  1:510149/1‑149 (MQ=255)                  ctGCCACTATGGAATTTATTGGTGCGACAATGCAGCAAACCGGTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTat                                                                                                                              >  2:193659/2‑148 (MQ=255)                      cAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTAtgaatgaa                                                                                                                       <  1:321593/151‑1 (MQ=255)                          atGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAAtgaactga                                                                                                                   <  2:546353/151‑1 (MQ=255)                             gAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAAtgaactgaac                                                                                                                 >  1:518234/1‑150 (MQ=255)                                 ttATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCgg                                                                                                            >  2:537168/1‑151 (MQ=255)                                  tATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGt                                                                                                           >  2:610130/1‑151 (MQ=255)                                   aTTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTc                                                                                                          <  1:221736/151‑1 (MQ=255)                                   aTTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTc                                                                                                          <  2:35573/151‑1 (MQ=255)                                       gTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTgg                                                                                                       >  2:329590/1‑150 (MQ=255)                                          cGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCt                                                                                                   <  2:117181/151‑1 (MQ=255)                                           gACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTg                                                                                                  <  1:598908/151‑1 (MQ=255)                                             cAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCg                                                                                                >  2:422491/1‑151 (MQ=255)                                              aaTGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGt                                                                                               <  2:11434/151‑1 (MQ=255)                                                  cagcaAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTc                                                                                           <  2:30301/151‑1 (MQ=255)                                                    gcaAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCAt                                                                                         >  1:213543/1‑151 (MQ=255)                                                       aaCCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTg                                                                                      <  1:157966/151‑1 (MQ=255)                                                             tCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCggg                                                                                 <  1:55492/150‑1 (MQ=255)                                                              cATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGcc                                                                               >  1:500907/1‑151 (MQ=255)                                                                     aaCAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGc                                                                        >  2:701368/1‑151 (MQ=255)                                                                           gcgcGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACAcgc                                                                  <  2:512686/151‑1 (MQ=255)                                                                                aTCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGc                                                             <  2:653110/151‑1 (MQ=255)                                                                                aTCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGc                                                             <  2:213535/151‑1 (MQ=255)                                                                                  cAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGt                                                           >  1:335979/1‑151 (MQ=255)                                                                                      cACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACt                                                       >  2:349083/1‑151 (MQ=255)                                                                                        cGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTAt                                                     >  2:743083/1‑151 (MQ=255)                                                                                          ccTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCt                                                   >  2:580849/1‑151 (MQ=255)                                                                                            tGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGc                                                 >  1:430217/1‑151 (MQ=255)                                                                                             ggTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGcc                                                <  1:293525/151‑1 (MQ=255)                                                                                                 gAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGcc                                                >  2:559910/1‑147 (MQ=255)                                                                                                  aGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATg                                           <  1:407189/151‑1 (MQ=255)                                                                                                   gtggtgAAAAAGCGGTTGCAGCCTTTACCGTTAACTTCACCCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCa                                               <  2:220266/146‑1 (MQ=255)                                                                                                   gtggtgAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGc                                          <  1:329603/151‑1 (MQ=255)                                                                                                     ggtgAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCt                                        >  1:264921/1‑151 (MQ=255)                                                                                                     ggtgAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCt                                        <  1:602297/151‑1 (MQ=255)                                                                                                        gAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCttt                                      <  2:504384/150‑1 (MQ=255)                                                                                                        gAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTg                                     >  2:363812/1‑151 (MQ=255)                                                                                                         aaaaaGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTgg                                    <  1:568851/151‑1 (MQ=255)                                                                                                         aaaaaGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTgg                                    >  1:105111/1‑151 (MQ=255)                                                                                                                 cTTGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGaa                              >  1:300479/1‑149 (MQ=255)                                                                                                                   tGCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAg                            <  1:29984/149‑1 (MQ=255)                                                                                                                    gCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGaa                              >  1:699376/1‑146 (MQ=255)                                                                                                                    gCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGaa                              >  2:681038/1‑146 (MQ=255)                                                                                                                    gCAGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGaa                              >  2:508169/1‑146 (MQ=255)                                                                                                                      aGCCATCACCGTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTg                       <  1:101770/151‑1 (MQ=255)                                                                                                                                gTTAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTaaa              >  2:301615/1‑150 (MQ=255)                                                                                                                                 ttAACTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAAc            >  1:756121/1‑151 (MQ=255)                                                                                                                                   aaCTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgc          >  2:331979/1‑151 (MQ=255)                                                                                                                                    aCTACACGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgct         <  2:48789/151‑1 (MQ=255)                                                                                                                                       acacGCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgctg        <  2:371133/149‑1 (MQ=255)                                                                                                                                           gCCTTGCGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATg  <  1:717824/151‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                 CGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATG  >  NC_000913/2232086‑2232374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑