Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	562,582	A→G	T83A (ACT→GCT)	sfmH →	FimA homolog, function unknown

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	562,582	0	A	G	100.0%	305.2 / NA	79	T83A (ACT→GCT)	sfmH	FimA homolog, function unknown
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (30/49);  total (30/49)

ATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAACTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCG  >  NC_000913/562435‑562729                                                                                                                                                    |                                                                                                                                                    atCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCt                                                                                                                                                   >  2:539443/1‑150 (MQ=255)  tCTTTAATAGCACCAATAACCAGCCAGGGCGGGTTGTTGTTTTACCTGAAAAATCCGGCTGGGTAGGTGTCTCGGAAATTTGTCCTCCCGGTACGCTGGTGAATTATACATACAGTAGTTATGTGACCAACTTTATTGTTCAGGTAGCTAt                                                                                                                                                 >  2:846395/1‑151 (MQ=255)  tCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTAt                                                                                                                                                 >  2:1005238/1‑151 (MQ=255)     ttAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATc                                                                                                                                                <  2:511717/149‑1 (MQ=255)     ttAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATc                                                                                                                                                <  1:809594/149‑1 (MQ=255)      tAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGa                                                                                                                                              >  2:660258/1‑150 (MQ=255)       aaTAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGAt                                                                                                                                             <  1:796090/150‑1 (MQ=255)         tAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAAt                                                                                                                                          >  2:126373/1‑151 (MQ=255)          aGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAAtt                                                                                                                                         >  1:250904/1‑151 (MQ=255)          aGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAAt                                                                                                                                          <  2:987066/150‑1 (MQ=255)             aCCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATtat                                                                                                                                       >  1:798020/1‑150 (MQ=255)               cAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATaaa                                                                                                                                    <  2:872705/151‑1 (MQ=255)                aaTAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAat                                                                                                                                   <  2:238912/151‑1 (MQ=255)                 aTAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAat                                                                                                                                   >  2:97202/1‑150 (MQ=255)                   aaCCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAatat                                                                                                                                 <  1:1025526/150‑1 (MQ=255)                   aaCCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAatat                                                                                                                                 >  2:34516/1‑150 (MQ=255)                    aCCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAatatat                                                                                                                               <  2:510928/151‑1 (MQ=255)                    aCCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAatatat                                                                                                                               >  2:1046941/1‑151 (MQ=255)                     ccagccagGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATg                                                                                                                              >  2:480568/1‑151 (MQ=255)                        gccagGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAAGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCaa                                                                                                                           <  1:413074/151‑1 (MQ=255)                          cagGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAAtt                                                                                                                         <  2:623320/151‑1 (MQ=255)                           agGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTa                                                                                                                        <  1:1061951/151‑1 (MQ=255)                             ggCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACa                                                                                                                      <  1:533902/151‑1 (MQ=255)                               cAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATg                                                                                                                    >  1:563981/1‑151 (MQ=255)                                aGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATg                                                                                                                    >  1:128708/1‑150 (MQ=255)                                    tgttgtTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTa                                                                                                                <  2:706387/150‑1 (MQ=255)                                    tgttgtTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTa                                                                                                                <  2:500941/150‑1 (MQ=255)                                        gttTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTAt                                                                                                           <  2:340332/151‑1 (MQ=255)                                           ttACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTAtt                                                                                                          >  1:690314/1‑149 (MQ=255)                                            tACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAg                                                                                                        <  1:45391/150‑1 (MQ=255)                                                  aaaaaTCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCTCCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGAt                                                                                                                  <  1:609028/134‑1 (MQ=255)                                                  aaaaaTCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGAt                                                                                                                  >  2:609011/1‑134 (MQ=255)                                                   aaaaTCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATg                                                                                                <  2:342819/151‑1 (MQ=255)                                                    aaaTCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGa                                                                                               <  2:261775/151‑1 (MQ=255)                                                         cGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTg                                                                                          <  1:666776/151‑1 (MQ=255)                                                              gggTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGa                                                                                     <  2:804691/151‑1 (MQ=255)                                                               ggTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGAt                                                                                    <  2:595756/151‑1 (MQ=255)                                                                 tAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGAt                                                                                    >  2:880235/1‑149 (MQ=255)                                                                  aGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAgt                                                                                 <  1:80532/151‑1 (MQ=255)                                                                  aGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAgt                                                                                 >  2:935291/1‑151 (MQ=255)                                                                  aGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAg                                                                                  <  2:237639/150‑1 (MQ=255)                                                                          cAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATgg                                                                          <  1:802524/150‑1 (MQ=255)                                                                           aGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGat                                                                        >  2:1032424/1‑151 (MQ=255)                                                                           aGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGat                                                                        <  1:937095/151‑1 (MQ=255)                                                                             cAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGatat                                                                      <  2:120/151‑1 (MQ=255)                                                                             cAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGatat                                                                      <  1:177661/151‑1 (MQ=255)                                                                              aaTTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATAtt                                                                     <  1:815436/151‑1 (MQ=255)                                                                                  tGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAg                                                                  <  2:69872/150‑1 (MQ=255)                                                                                     ccACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTc                                                               <  1:97204/150‑1 (MQ=255)                                                                                          cGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCg                                                         <  1:788746/151‑1 (MQ=255)                                                                                           ggTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGc                                                        <  1:349038/151‑1 (MQ=255)                                                                                            gTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCa                                                       <  2:525543/151‑1 (MQ=255)                                                                                                gCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAAt                                                   <  2:190451/151‑1 (MQ=255)                                                                                                   ggTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAAtt                                                  <  1:14930/149‑1 (MQ=255)                                                                                                       aaTTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTc                                            >  2:1027879/1‑151 (MQ=255)                                                                                                           atacatacCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGa                                         <  1:260379/150‑1 (MQ=255)                                                                                                              catacCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATggg                                     >  2:489654/1‑151 (MQ=255)                                                                                                               atacCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATggg                                     >  2:6093/1‑150 (MQ=255)                                                                                                                 acCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATAAGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAAc                                  >  1:405042/1‑151 (MQ=255)                                                                                                                   cGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAg                                <  2:5137/151‑1 (MQ=255)                                                                                                                      aGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATc                             <  2:390580/151‑1 (MQ=255)                                                                                                                        ttATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCt                           >  1:677533/1‑151 (MQ=255)                                                                                                                             tCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGt                      >  1:464005/1‑151 (MQ=255)                                                                                                                              cACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGtt                     <  2:509300/151‑1 (MQ=255)                                                                                                                              cACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGtt                     <  2:1001335/151‑1 (MQ=255)                                                                                                                              cACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGtt                     <  1:603692/151‑1 (MQ=255)                                                                                                                               aCCAACTTTATTGTTCAGGCAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGttt                    >  2:341122/1‑151 (MQ=255)                                                                                                                                ccAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGttt                    <  1:132142/150‑1 (MQ=255)                                                                                                                                  aaCTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCg                  >  1:307781/1‑150 (MQ=255)                                                                                                                                  aaCTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGc                 >  2:408058/1‑151 (MQ=255)                                                                                                                                      ttATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCaa               <  1:250850/149‑1 (MQ=255)                                                                                                                                       tATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCaaaa             <  1:24998/150‑1 (MQ=255)                                                                                                                                          tGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCt          <  2:419721/150‑1 (MQ=255)                                                                                                                                           gTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCtt         <  1:1011167/150‑1 (MQ=255)                                                                                                                                           gTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTc        >  2:284288/1‑151 (MQ=255)                                                                                                                                              cAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCAt     <  2:507523/151‑1 (MQ=255)                                                                                                                                              cAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCAt     >  1:957371/1‑151 (MQ=255)                                                                                                                                                ggAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTc   <  2:641523/151‑1 (MQ=255)                                                                                                                                                 gAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCg  >  1:910010/1‑151 (MQ=255)                                                                                                                                                    |                                                                                                                                                    ATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAACTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCG  >  NC_000913/562435‑562729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑