Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,559,936 T→C V360A (GTC→GCC)  intZ → CPZ‑55 prophage; putative phage integrase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,559,9360TC100.0% 420.6 / NA 114V360A (GTC→GCC) intZCPZ‑55 prophage; putative phage integrase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (59/55);  total (59/55)

Only 100 of 118 total aligned reads displayed.

TGTCAGCCAGCGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGTCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTT  >  NC_000913/2559789‑2560083
                                                                                                                                                   |                                                                                                                                                   
tGTCAGCCAGCGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGccc                                                                                                                                                   <  1:181699/150‑1 (MQ=255)
 gTCAGCCAGCGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGcccc                                                                                                                                                  <  1:446974/150‑1 (MQ=255)
 gTCAGCCAGCGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGcccc                                                                                                                                                  <  2:476958/150‑1 (MQ=255)
  tCAGCCAGCGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCg                                                                                                                                                 >  1:745398/1‑150 (MQ=255)
      ccagcGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAggg                                                                                                                                            >  1:972192/1‑151 (MQ=255)
       cagcGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAggg                                                                                                                                            >  2:546788/1‑150 (MQ=255)
          cgcgATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGTTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATa                                                                                                                                        <  2:1777567/151‑1 (MQ=255)
          cgcgATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATa                                                                                                                                        <  1:1086308/151‑1 (MQ=255)
           gcgATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATa                                                                                                                                        >  2:1947477/1‑150 (MQ=255)
           gcgATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATa                                                                                                                                        >  1:68037/1‑150 (MQ=255)
           gcgATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATa                                                                                                                                        >  1:2025745/1‑150 (MQ=255)
                aCTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAgggg                                                                                                                                   <  2:1768620/150‑1 (MQ=255)
                aCTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAgggg                                                                                                                                   <  1:947177/150‑1 (MQ=255)
                   tAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGtt                                                                                                                               >  2:851175/1‑151 (MQ=255)
                   tAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGt                                                                                                                                <  1:509711/150‑1 (MQ=255)
                    aaaGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGttt                                                                                                                              <  2:1406367/151‑1 (MQ=255)
                     aaGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACGCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCg                                                                                                                                 <  2:265046/147‑1 (MQ=255)
                        cgcTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTtata                                                                                                                           >  1:701644/1‑150 (MQ=255)
                        cgcTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATaa                                                                                                                          <  2:661270/151‑1 (MQ=255)
                            tGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCa                                                                                                                       <  2:1246598/150‑1 (MQ=255)
                             gAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAgg                                                                                                                     >  2:352212/1‑151 (MQ=255)
                              aGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGc                                                                                                                    >  2:695083/1‑151 (MQ=255)
                                cGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTg                                                                                                                  <  2:982973/151‑1 (MQ=255)
                                  tATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGcc                                                                                                                >  2:1118867/1‑151 (MQ=255)
                                              gTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCaa                                                                                                    <  1:1663883/151‑1 (MQ=255)
                                                   tAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCg                                                                                               >  1:814310/1‑151 (MQ=255)
                                                    aGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCg                                                                                               >  1:888365/1‑150 (MQ=255)
                                                     gCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAg                                                                                             <  1:1355092/151‑1 (MQ=255)
                                                       cacaGGCCACGGCTGGCGCACAACGTTCGGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGc                                                                                            >  2:241638/1‑150 (MQ=255)
                                                       cacaGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGc                                                                                            >  1:1863370/1‑150 (MQ=255)
                                                       cacaGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGc                                                                                            >  2:1695466/1‑150 (MQ=255)
                                                               aCGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGc                                                                                    >  2:357190/1‑150 (MQ=255)
                                                                  gCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAgg                                                                                 >  2:399643/1‑150 (MQ=255)
                                                                  gCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAgg                                                                                 >  1:796481/1‑150 (MQ=255)
                                                                     ggCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGAtt                                                                              >  2:541054/1‑150 (MQ=255)
                                                                     ggCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGAtt                                                                              <  1:1516711/150‑1 (MQ=255)
                                                                       cgcACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACg                                                                           >  2:1282230/1‑151 (MQ=255)
                                                                       cgcACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACg                                                                           >  2:2054242/1‑151 (MQ=255)
                                                                         cacaACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGcc                                                                         >  2:1476799/1‑151 (MQ=255)
                                                                            aaCGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGAc                                                                      <  2:626646/151‑1 (MQ=255)
                                                                             aCGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACg                                                                     >  1:1659025/1‑151 (MQ=255)
                                                                               gTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCt                                                                   <  1:1802137/151‑1 (MQ=255)
                                                                                ttCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCt                                                                   >  1:51311/1‑150 (MQ=255)
                                                                                 tCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTa                                                                  <  2:767473/150‑1 (MQ=255)
                                                                                 tCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTa                                                                  <  1:1838239/150‑1 (MQ=255)
                                                                                 tCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTAt                                                                 >  2:1705600/1‑151 (MQ=255)
                                                                                  cAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTAt                                                                 <  1:1299229/150‑1 (MQ=255)
                                                                                   aGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTg                                                               >  1:8372/1‑151 (MQ=255)
                                                                                     cACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGAt                                                             >  1:1303591/1‑151 (MQ=255)
                                                                                      aCCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGAtt                                                            <  2:306321/151‑1 (MQ=255)
                                                                                        cGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCa                                                          <  1:860318/151‑1 (MQ=255)
                                                                                        cGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCa                                                          <  1:235717/151‑1 (MQ=255)
                                                                                          cACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAat                                                        <  1:1978792/151‑1 (MQ=255)
                                                                                            cTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAatat                                                      >  1:927018/1‑151 (MQ=255)
                                                                                             ttAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATAtt                                                     >  1:94537/1‑151 (MQ=255)
                                                                                             ttAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATAtt                                                     >  2:1976697/1‑151 (MQ=255)
                                                                                              tAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTg                                                    >  2:1344126/1‑151 (MQ=255)
                                                                                               aaCGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTgg                                                   <  2:493413/151‑1 (MQ=255)
                                                                                               aaCGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTgg                                                   <  1:393285/151‑1 (MQ=255)
                                                                                                aCGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGc                                                  >  1:1139851/1‑151 (MQ=255)
                                                                                                 cGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGc                                                  >  2:183235/1‑150 (MQ=255)
                                                                                                   aaTCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAgg                                               >  2:1591191/1‑151 (MQ=255)
                                                                                                     tCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGt                                              >  1:1581928/1‑150 (MQ=255)
                                                                                                      cAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTa                                             <  2:906177/150‑1 (MQ=255)
                                                                                                         gCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACgg                                         <  1:648844/151‑1 (MQ=255)
                                                                                                          cAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGc                                        <  2:1385423/151‑1 (MQ=255)
                                                                                                          cAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGc                                        <  2:1740308/151‑1 (MQ=255)
                                                                                                           aGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCa                                       <  1:546794/151‑1 (MQ=255)
                                                                                                           aGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCa                                       <  2:1074146/151‑1 (MQ=255)
                                                                                                              tACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAAt                                     >  1:1684012/1‑150 (MQ=255)
                                                                                                                 tCGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCctc                                 >  2:698417/1‑151 (MQ=255)
                                                                                                                  cGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCctct                                <  2:1168250/151‑1 (MQ=255)
                                                                                                                  cGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCctc                                 <  2:1458680/150‑1 (MQ=255)
                                                                                                                  cGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCct                                  <  2:1802250/149‑1 (MQ=255)
                                                                                                                  cGCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCct                                  <  1:2064628/149‑1 (MQ=255)
                                                                                                                   gCCGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCctct                                >  1:1565128/1‑150 (MQ=255)
                                                                                                                    ccGGATTGGATTGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCctct                                >  1:1584190/1‑149 (MQ=255)
                                                                                                                      ggattggattGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGa                             >  2:1529169/1‑150 (MQ=255)
                                                                                                                      ggattggattGAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGa                             >  1:1662592/1‑150 (MQ=255)
                                                                                                                        attggattgAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAAcc                          >  1:163687/1‑151 (MQ=255)
                                                                                                                         ttggattgAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCg                         >  2:678631/1‑151 (MQ=255)
                                                                                                                          tggattgAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCgg                        >  2:1878802/1‑151 (MQ=255)
                                                                                                                          tggattgAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCgg                        >  1:257824/1‑151 (MQ=255)
                                                                                                                          tggattgAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCg                         <  2:1688406/150‑1 (MQ=255)
                                                                                                                              ttgAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGgaatg                    >  2:578035/1‑151 (MQ=255)
                                                                                                                               tgAGATCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGgaatg                    <  2:297457/150‑1 (MQ=255)
                                                                                                                                 agaTCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGgaatgaat                 <  1:2064475/151‑1 (MQ=255)
                                                                                                                                   aTCCAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGaata                >  2:1052539/1‑150 (MQ=255)
                                                                                                                                     ccAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAAtt             <  1:1362417/151‑1 (MQ=255)
                                                                                                                                      cAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAAtt             >  1:1450486/1‑150 (MQ=255)
                                                                                                                                      cAACTAGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTa            <  2:948506/151‑1 (MQ=255)
                                                                                                                                          tAGCCCATGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCg        >  1:33747/1‑151 (MQ=255)
                                                                                                                                           aGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCgg       <  1:566227/151‑1 (MQ=255)
                                                                                                                                           aGCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCgg       >  2:183539/1‑151 (MQ=255)
                                                                                                                                            gCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGc      <  2:1990822/151‑1 (MQ=255)
                                                                                                                                            gCCCACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGc      >  2:1024166/1‑151 (MQ=255)
                                                                                                                                             cccACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCt     <  1:98046/151‑1 (MQ=255)
                                                                                                                                               cACGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCttt   <  1:601221/151‑1 (MQ=255)
                                                                                                                                                aCGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCtttt  <  1:1856220/151‑1 (MQ=255)
                                                                                                                                                aCGCCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCtttt  <  1:410659/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TGTCAGCCAGCGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGTCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGAATAATTAAGCGGCTTTT  >  NC_000913/2559789‑2560083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑